ProsmORF-pred
Result : P64130
Protein Information
Information Type Description
Protein name Putative Fis-like DNA-binding protein
NCBI Accession ID AL157959.1
Organism Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
Left 1538460
Right 1538699
Strand -
Nucleotide Sequence ATGCCCCATACCCTTCCCGATATTTCTCAATGCATCAGACAAAATTTAGAACAATATTTCAAAGACCTGAACGGTACCGAACCTTGCGGCGTGTACGATATGGTATTGCATCAGGTGGAAAAGCCGCTGCTGGTGTGCGTGATGGAGCAATGCGGCGGTAATCAGTCCAAAGCCTCCGTCATGTTGGGGCTGAACCGCAATACCCTGCGTAAGAAGCTGATTCAACACGGTTTGTTGTGA
Sequence MPHTLPDISQCIRQNLEQYFKDLNGTEPCGVYDMVLHQVEKPLLVCVMEQCGGNQSKASVMLGLNRNTLRKKLIQHGLL
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl22895. Profile Description: Bacterial regulatory protein, Fis family.
Pubmed ID 10761919
Domain CDD:419882
Functional Category DNA-binding
Uniprot ID P64130
ORF Length (Amino Acid) 79
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Conservation Analysis
Conservation Analysis
No. of Species: 263
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 1222851 1223090 - NZ_LS483369.1 Neisseria cinerea
2 669150 669389 - NZ_CP031325.1 Neisseria polysaccharea
3 1013876 1014115 - NZ_CP021520.1 Neisseria meningitidis
4 1531758 1531997 - NZ_CP031253.1 Neisseria lactamica
5 1412340 1412579 + NZ_CP012028.1 Neisseria gonorrhoeae
6 9093 9338 + NZ_CP072524.1 Neisseria sicca
7 81956 82195 + NZ_CP039886.1 Neisseria flavescens
8 1418248 1418487 - NZ_CP039887.1 Neisseria subflava
9 312512 312754 + NZ_LR134516.1 Neisseria animaloris
10 534594 534839 - NZ_CP031699.1 Neisseria animalis
11 776231 776476 + NZ_LT906434.1 Neisseria zoodegmatis
12 13714 13959 - NZ_CP060414.1 Neisseria musculi
13 979836 980081 + NZ_LR134533.1 Neisseria weaveri
14 566079 566291 - NZ_CP046027.1 Neisseria brasiliensis
15 872614 872853 + NZ_CP059569.1 Kingella oralis
16 649940 650185 + NZ_CP031700.1 Neisseria zalophi
17 1874193 1874432 - NZ_CP019448.1 Simonsiella muelleri ATCC 29453
18 1227812 1228057 - NZ_CP059565.1 Neisseria wadsworthii
19 647376 647588 - NZ_CP022278.1 Neisseria chenwenguii
20 1189615 1189854 - NZ_CP059564.1 Alysiella filiformis
21 1497481 1497720 + NZ_CP031252.1 Neisseria elongata
22 334960 335205 + NZ_LR134313.1 Neisseria canis
23 244535 244774 - NZ_CP059571.1 Neisseria bacilliformis
24 1980891 1981130 + NZ_CP059567.1 Neisseria shayeganii
25 1710695 1710895 - NZ_CP059563.1 Conchiformibius steedae
26 2358944 2359180 - NZ_CP007446.1 Snodgrassella alvi wkB2
27 1450394 1450600 + NZ_CP027666.1 Ottowia oryzae
28 2826570 2826803 - NZ_CP035900.1 Burkholderia glumae
29 350806 351039 - NC_021287.1 Caballeronia insecticola
30 590847 591098 - NZ_CP020121.1 Comamonas kerstersii
31 617499 617735 + NZ_CP022579.1 Oryzomicrobium terrae
32 4693340 4693573 - NZ_CP019236.1 Rhodoferax koreense
33 632894 633127 - NZ_CP002580.1 Burkholderia plantarii
34 4198491 4198730 - NZ_CP017476.1 Hydrogenophaga crassostreae
35 3780703 3780909 - NZ_CP051298.1 Alicycliphilus denitrificans
36 757907 758140 - NZ_CP013459.1 Burkholderia stagnalis
37 1397481 1397714 - NC_007651.1 Burkholderia thailandensis E264
38 3581447 3581680 + NZ_CP060783.1 Diaphorobacter aerolatus
39 3574982 3575188 - NZ_CP065748.1 Delftia lacustris
40 1000619 1000855 - NZ_CP064338.1 Schlegelella thermodepolymerans
41 3535707 3535913 - NZ_CP017420.1 Delftia tsuruhatensis
42 2874605 2874838 + NC_010622.1 Paraburkholderia phymatum STM815
43 2998663 2998896 + NZ_CP026111.1 Paraburkholderia terrae
44 2724696 2724929 - NZ_CP015958.1 Paraburkholderia caribensis
45 1796575 1796808 - NZ_CP022989.1 Paraburkholderia aromaticivorans
46 729228 729461 - NZ_CP020737.1 Paraburkholderia acidophila
47 820182 820415 - NZ_CP013414.1 Burkholderia ubonensis
48 2638591 2638824 + NZ_CP009795.1 Burkholderia dolosa AU0158
49 772499 772732 - NZ_CP009832.1 Burkholderia multivorans ATCC BAA-247
50 678620 678826 + NZ_CP054840.1 Acidovorax antarcticus
51 3645212 3645424 - NC_015677.1 Ramlibacter tataouinensis TTB310
52 3457815 3458048 - NZ_CP017561.1 Paraburkholderia sprentiae WSM5005
53 75220 75453 - NZ_CP009727.1 Burkholderia mallei
54 2413060 2413293 - NZ_CP008781.1 Burkholderia pseudomallei
55 2377955 2378188 - NZ_CP009555.1 Burkholderia oklahomensis C6786
56 3420899 3421132 + NZ_CP024941.1 Paraburkholderia terricola
57 3537850 3538059 - NZ_CP019239.1 Rhodoferax saidenbachensis
58 3891040 3891246 + NZ_CP016278.1 Diaphorobacter polyhydroxybutyrativorans
59 3309213 3309449 + NZ_CP051461.1 Polaromonas vacuolata
60 2987550 2987780 + NZ_LR778301.1 Denitratisoma oestradiolicum
61 3772134 3772340 + NZ_CP011568.3 Pandoraea thiooxydans
62 3760688 3760921 + NC_010681.1 Paraburkholderia phytofirmans PsJN
63 3758743 3758952 - NZ_CP035503.1 Rhodoferax sediminis
64 581142 581378 - NC_010524.1 Leptothrix cholodnii SP-6
65 527034 527267 - NZ_CP039287.1 Cupriavidus necator H16
66 3291329 3291562 - NZ_CP066075.1 Paraburkholderia ginsengisoli
67 470658 470891 - NZ_CP032519.1 Cupriavidus oxalaticus
68 3003260 3003484 + NZ_LR134378.1 Lautropia mirabilis
69 2867947 2868156 - NC_014394.1 Gallionella capsiferriformans ES-2
70 3384412 3384645 + NZ_CP024934.1 Paraburkholderia graminis
71 4197082 4197315 + NC_007951.1 Paraburkholderia xenovorans LB400
72 454712 454945 - NZ_CP029640.1 Paraburkholderia dokdonella
73 898508 898717 + NZ_CP037867.1 Hydrogenophaga pseudoflava
74 356729 356923 - NC_007947.1 Methylobacillus flagellatus KT
75 566533 566772 - NZ_CP038018.1 Eikenella exigua
76 682943 683176 - NZ_CP013398.1 Burkholderia seminalis
77 674230 674463 - NZ_CP013401.1 Burkholderia metallica
78 1950759 1950992 - NZ_CP011503.1 Burkholderia pyrrocinia
79 684120 684353 - NZ_CP013450.1 Burkholderia cenocepacia
80 688982 689215 - NZ_CP045235.1 Burkholderia cepacia
81 673349 673582 - NC_007510.1 Burkholderia lata
82 995070 995276 + NZ_CP027792.1 Pulveribacter suum
83 785404 785610 - NZ_CP013481.2 Pandoraea apista
84 1503036 1503242 - NZ_CP047385.1 Pandoraea fibrosis
85 1512340 1512573 + NZ_CP031467.1 Paraburkholderia caffeinilytica
86 527573 527812 - NC_008825.1 Methylibium petroleiphilum PM1
87 460881 461114 - NZ_CP046913.1 Paraburkholderia acidisoli
88 469129 469362 - NZ_CP016022.1 Ralstonia insidiosa
89 451397 451630 - NZ_CP049134.1 Paraburkholderia tropica
90 1408073 1408267 - NZ_CP064781.1 Azospira restricta
91 4258508 4258741 - NZ_CP060714.1 Diaphorobacter ruginosibacter
92 426776 427012 - NZ_CP029210.1 Aquabacterium olei
93 463087 463320 - NZ_CP046909.1 Paraburkholderia acidiphila
94 3381128 3381334 - NC_008786.1 Verminephrobacter eiseniae EF01-2
95 207785 207979 + NZ_CP053073.1 Usitatibacter palustris
96 3016614 3016850 - NZ_CP022423.1 Vitreoscilla filiformis
97 1019034 1019246 - NZ_AP014569.1 Serpentinomonas mccroryi
98 964870 965103 - NZ_CP017754.1 Cupriavidus malaysiensis
99 5056213 5056419 - NZ_CP013232.1 Collimonas fungivorans
100 5441424 5441657 + NZ_CP013480.3 Pandoraea norimbergensis
101 2727774 2727986 - NZ_CP021455.1 Comamonas serinivorans
102 5130249 5130455 + NZ_CP010310.2 Pandoraea pulmonicola
103 972453 972659 + NC_008752.1 Acidovorax citrulli AAC00-1
104 2379188 2379421 - NZ_CP011257.1 Ralstonia mannitolilytica
105 3278672 3278878 + NZ_CP040709.1 Inhella inkyongensis
106 1314542 1314751 - NZ_AP014568.1 Serpentinomonas raichei
107 2534860 2535093 + NZ_CP054626.1 Cupriavidus gilardii
108 2467692 2467898 - NZ_CP060790.1 Acidovorax monticola
109 2096800 2097033 - NZ_LT671418.1 Herminiimonas arsenitoxidans
110 3559172 3559381 - NC_008781.1 Polaromonas naphthalenivorans CJ2
111 1711961 1712170 + NC_007908.1 Rhodoferax ferrireducens T118
112 49135 49341 - NC_022357.1 Sulfuricella denitrificans skB26
113 4474402 4474608 + NZ_CP011807.3 Pandoraea faecigallinarum
114 4881196 4881402 + NZ_CP010897.2 Pandoraea vervacti
115 4989000 4989206 + NZ_LT906435.1 Pandoraea sputorum
116 840169 840375 - NZ_CP025682.1 Azoarcus pumilus
117 3225232 3225492 + NZ_CP035708.1 Sphaerotilus natans subsp. sulfidivorans
118 2429380 2429613 + NC_014722.1 Mycetohabitans rhizoxinica HKI 454
119 4011563 4011805 - NZ_CP028901.1 Algicoccus marinus
120 641378 641611 - NZ_CP062803.1 Cupriavidus basilensis
121 934508 934714 + NC_015138.1 Acidovorax avenae subsp. avenae ATCC 19860
122 392542 392775 - NC_012969.1 Methylovorus glucosetrophus SIP3-4
123 2572479 2572712 - NZ_CP012943.1 Ralstonia solanacearum
124 67601 67834 + NZ_CP068285.1 Ralstonia syzygii subsp. celebesensis
125 4025834 4026064 - NZ_CP041335.1 Chitinolyticbacter meiyuanensis
126 4828495 4828731 + NZ_CP024645.1 Rhizobacter gummiphilus
127 4108474 4108683 - NZ_CP013235.1 Collimonas arenae
128 4993101 4993310 + NZ_CP043046.1 Pigmentiphaga aceris
129 3109991 3110224 - NZ_CP018845.1 Herbaspirillum robiniae
130 782322 782528 + NZ_CP021359.1 Acidovorax carolinensis
131 90580 90819 + NZ_LT906482.1 Eikenella corrodens
132 444952 445185 + NZ_CP013737.1 Herbaspirillum rubrisubalbicans M1
133 448800 449033 + NZ_CP011930.1 Herbaspirillum seropedicae
134 2157953 2158174 - NZ_CP058952.1 Chitinibacter fontanus
135 3082365 3082574 - NZ_CP019240.1 Rhodoferax antarcticus
136 4620036 4620242 + NC_023018.2 Pandoraea pnomenusa
137 4752597 4752830 + NZ_CP046904.1 Massilia flava
138 1080167 1080403 + NZ_CP059467.1 Aromatoleum bremense
139 3302131 3302337 + NZ_CP007029.1 Thioalkalivibrio paradoxus ARh 1
140 5008341 5008550 - NZ_CP013236.1 Collimonas pratensis
141 4696709 4696948 + NZ_CP016172.1 Bordetella flabilis
142 450798 451004 - NC_019902.2 Thioalkalivibrio nitratireducens DSM 14787
143 2410090 2410296 + NZ_CP041730.1 Chitinimonas arctica
144 1317741 1318001 + NZ_CP021060.1 Taylorella equigenitalis
145 668752 668988 + NC_006513.1 Aromatoleum aromaticum EbN1
146 1155165 1155374 - NZ_CP043146.1 Bordetella holmesii
147 1651860 1652054 - NZ_CP012371.1 Nitrosospira briensis C-128
148 719001 719210 + NZ_CP021395.1 Bordetella hinzii
149 137575 137817 + NC_007614.1 Nitrosospira multiformis ATCC 25196
150 2156573 2156797 - NZ_CP047650.1 Xylophilus rhododendri
151 5955044 5955277 + NZ_CP040017.1 Massilia umbonata
152 5875729 5875962 - NZ_CP036401.1 Massilia albidiflava
153 3698311 3698505 - NZ_AP022853.1 Sulfurimicrobium lacus
154 583641 583835 + NC_005085.1 Chromobacterium violaceum ATCC 12472
155 2715599 2715793 - NZ_CP017707.1 Chromobacterium vaccinii
156 4853993 4854187 - NZ_AP019312.1 Chromobacterium haemolyticum
157 263238 263471 - NZ_CP011367.1 Thioalkalivibrio versutus
158 943140 943334 - NZ_CP039731.1 Aquitalea aquatilis
159 408053 408265 - NC_011901.1 Thioalkalivibrio sulfidiphilus HL-EbGr7
160 1625698 1625904 + NZ_CP043575.1 Comamonas koreensis
161 954360 954602 + NC_004757.1 Nitrosomonas europaea ATCC 19718
162 3691736 3691945 + NZ_CP016440.1 Bordetella pseudohinzii
163 4955892 4956125 - NZ_HG322949.1 Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628
164 3964047 3964256 - NC_018518.1 Bordetella pertussis 18323
165 3161987 3162196 + NZ_AP019378.1 Bordetella parapertussis
166 1052706 1052915 - NZ_LR134326.1 Bordetella bronchiseptica
167 53564 53758 + NZ_CP047241.1 Aquitalea denitrificans
168 1591337 1591570 + NZ_CP024608.1 Massilia violaceinigra
169 3362972 3363166 - NZ_CP043473.1 Chromobacterium paludis
170 195696 195890 + NZ_CP053069.1 Usitatibacter rugosus
171 177701 177898 - NZ_AP018721.1 Sulfuritortus calidifontis
172 5411643 5411852 + NZ_CP038034.1 Achromobacter insolitus
173 6070443 6070652 - NZ_CP053986.1 Achromobacter denitrificans
174 3026903 3027136 - NZ_CP034464.1 Undibacterium parvum
175 1146629 1146862 + NZ_CP023422.1 Janthinobacterium svalbardensis
176 5018097 5018330 + NZ_CP041185.1 Janthinobacterium tructae
177 1160756 1160989 + NZ_CP048832.1 Janthinobacterium lividum
178 297220 297417 + NC_013959.1 Sideroxydans lithotrophicus ES-1
179 4854471 4854677 + NZ_CP011253.3 Pandoraea oxalativorans
180 516699 516932 + NZ_CP037993.1 Herbaspirillum huttiense
181 3051381 3051575 + NZ_AP021884.1 Sulfuriferula plumbiphila
182 2138432 2138689 + NZ_CP020046.1 Thiomonas intermedia
183 3603072 3603281 - NZ_LR134302.1 Achromobacter spanius
184 2010513 2010752 + NZ_AP019755.1 Nitrosomonas stercoris
185 1430781 1431014 - NZ_CP013729.1 Roseateles depolymerans
186 3002738 3002932 + NC_010645.1 Bordetella avium 197N
187 1491372 1491605 + NZ_CP028324.1 Massilia armeniaca
188 1218729 1218950 - NZ_CP016171.1 Bordetella bronchialis
189 1382179 1382373 - NZ_CP029495.1 Chromobacterium phragmitis
190 1003703 1003912 - NC_010170.1 Bordetella petrii
191 938946 939215 + NZ_CP012362.1 Oblitimonas alkaliphila
192 1264067 1264309 + NC_008344.1 Nitrosomonas eutropha C91
193 1168742 1168951 - NZ_LT907988.1 Orrella dioscoreae
194 1796880 1797116 + NZ_CP023276.1 Polynucleobacter difficilis
195 3871799 3872005 + NZ_AP014936.1 Sulfurifustis variabilis
196 2675588 2675830 + NZ_CP011451.1 Nitrosomonas communis
197 2079138 2079383 - NZ_CP047165.1 Pelistega ratti
198 421534 421728 - NC_014207.1 Methylotenera versatilis 301
199 1424163 1424402 + NZ_CP030086.1 Polynucleobacter paneuropaeus
200 4925894 4926127 + NZ_CP019038.1 Massilia putida
201 2090959 2091165 - NZ_AP021881.1 Sulfuriferula nivalis
202 580410 580628 - NZ_CP051183.1 Bermanella marisrubri
203 265221 265430 - NZ_CP022987.1 Pusillimonas thiosulfatoxidans
204 23177 23419 + NZ_AP022345.1 Fluviibacter phosphoraccumulans
205 420781 420987 - NC_012968.1 Methylotenera mobilis JLW8
206 1323830 1324069 + NZ_LT615228.1 Polynucleobacter necessarius
207 3012022 3012258 + NC_020888.1 Thalassolituus oleivorans MIL-1
208 2410407 2410619 + NC_005966.1 Acinetobacter baylyi ADP1
209 492325 492537 - NZ_AP018724.1 Sulfurivermis fontis
210 3405165 3405377 - NZ_CP040105.1 Acinetobacter nosocomialis M2
211 1797523 1797735 + NC_016603.1 Acinetobacter pittii PHEA-2
212 3305015 3305227 - NZ_CP070518.1 Acinetobacter calcoaceticus
213 1401468 1401680 - NZ_CP053391.1 Acinetobacter lactucae
214 1375430 1375642 - NZ_CP015121.1 Acinetobacter baumannii
215 1436310 1436522 - NZ_CP065820.1 Acinetobacter seifertii
216 1359444 1359656 - NC_014259.1 Acinetobacter oleivorans DR1
217 2123260 2123481 + NZ_LR699119.1 Aquicella siphonis
218 1832985 1833224 + NZ_CP007501.1 Polynucleobacter duraquae
219 1324199 1324393 - NZ_CP030241.1 Moraxella bovis
220 3499406 3499630 + NZ_CP031093.1 Hydrocarboniclastica marina
221 3393435 3393629 - NC_018868.3 Simiduia agarivorans SA1 = DSM 21679
222 1514545 1514745 + NZ_CP018632.1 Granulosicoccus antarcticus IMCC3135
223 3622187 3622381 - NZ_CP022684.1 Ketobacter alkanivorans
224 3160111 3160317 + NZ_CP004387.1 Alcanivorax pacificus W11-5
225 1879292 1879501 - NZ_AP017372.2 Halorhodospira halochloris
226 3283336 3283557 + NZ_CP016268.1 Woeseia oceani
227 1094972 1095178 - NC_018691.1 Alcanivorax dieselolei B5
228 1952469 1952708 + NC_009379.1 Polynucleobacter asymbioticus QLW-P1DMWA-1
229 1166595 1166831 - NZ_CP003915.1 Advenella mimigardefordensis DPN7
230 2773210 2773404 + NZ_CP031415.1 Saccharospirillum mangrovi
231 1306752 1306973 - NZ_CP065728.1 Moraxella nonliquefaciens
232 3950571 3950777 + NZ_CP015839.1 Marinobacterium aestuarii
233 835053 835301 - NZ_CP048878.1 Spartinivicinus ruber
234 3673607 3673855 - NZ_CP031416.1 Gallaecimonas mangrovi
235 2300693 2300899 + NC_008260.1 Alcanivorax borkumensis SK2
236 2411392 2411586 - NZ_CP007142.1 Gynuella sunshinyii YC6258
237 587193 587399 - NZ_CP014870.1 Pseudomonas silesiensis
238 3479991 3480254 + NZ_CP043929.1 Methylomonas rhizoryzae
239 3037865 3038059 + NZ_CP009533.1 Pseudomonas rhizosphaerae
240 4231850 4232056 + NZ_CP013124.1 Pseudomonas mendocina S5.2
241 4417298 4417504 + NZ_CP060009.1 Pseudomonas sediminis
242 1316333 1316527 - NZ_CP054301.1 Marinomonas primoryensis
243 801507 801713 - NZ_CP068551.1 Pseudomonas khazarica
244 2685095 2685307 + NZ_CP011971.1 Steroidobacter denitrificans
245 781473 781679 - NZ_CP020931.1 Marinobacter salarius
246 2928610 2928804 + NZ_CP011797.1 Reinekea forsetii
247 1615063 1615269 - NC_015572.1 Methylomonas methanica MC09
248 4027187 4027387 + NZ_CP043042.1 Marinobacter fonticola
249 3662174 3662371 - NZ_CP014841.1 Dyella thiooxydans
250 1123541 1123759 - NZ_CP014544.1 Zhongshania aliphaticivorans
251 5189514 5189708 + NZ_CP067022.1 Pseudomonas cannabina pv. alisalensis
252 6148112 6148330 + NC_007645.1 Hahella chejuensis KCTC 2396
253 5135969 5136175 + NZ_CP046621.1 Pseudomonas alkylphenolica
254 780905 781111 - NZ_CP071706.1 Pseudomonas donghuensis
255 5448760 5448966 + NC_002516.2 Pseudomonas aeruginosa PAO1
256 1555047 1555241 + NZ_AP018933.1 Zymobacter palmae
257 3092089 3092283 + NZ_AP014545.1 Amphritea japonica ATCC BAA-1530
258 3144641 3144847 - NZ_CP070505.1 Pseudomonas toyotomiensis
259 1416296 1416502 - NZ_CP048833.1 Pseudomonas multiresinivorans
260 4048859 4049053 + NZ_CP048812.1 Halomonas socia
261 2437154 2437417 + NZ_CP061205.1 Kordiimonas pumila
262 5396594 5396800 + NZ_CP047698.1 Pseudomonas knackmussii
263 3610695 3610901 + NZ_CP011494.1 Marinobacter psychrophilus
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_CP072524.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF01207.19 0.93 245 39 same-strand Dihydrouridine synthase (Dus)
2 PF01808.20 0.93 244 73.5 same-strand AICARFT/IMPCHase bienzyme
3 PF02142.24 0.93 245 74 same-strand MGS-like domain
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