Result : P59471
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Putative membrane protein insertion efficiency factor |
| NCBI Accession ID | AE016826.1 |
| Organism | Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) |
| Left | 15390 |
| Right | 15647 |
| Strand | + |
| Nucleotide Sequence | ATGGTCTTATTATTATCAATGATATCTCGATGTTTAATTTTAATTATTCTGTGCTATCAGCGTTATATTAGTGTTTTTCTTTCACCTCGTTGTCGTTTTTATCCTACGTGTTCGCATTATGCAGTAGATGCTTTATATACTTTTGGATTGTTAAAGGGATTGTTATTAATTGCAAAGAGAATATTAAAGTGTCATCCCTTTCATTCTGGTGGTTTAAATAGTATATCTATAAAAACTAAAAGTAAAAGAGAATATTAA |
| Sequence | MVLLLSMISRCLILIILCYQRYISVFLSPRCRFYPTCSHYAVDALYTFGLLKGLLLIAKRILKCHPFHSGGLNSISIKTKSKREY |
| Source of smORF | Swiss-Prot |
| Function | Could be involved in insertion of integral membrane proteins into the membrane. {ECO:0000255|HAMAP-Rule:MF_00386}. |
| Pubmed ID | 12522265 |
| Domain | CDD:412414 |
| Functional Category | Others |
| Uniprot ID | P59471 |
| ORF Length (Amino Acid) | 85 |
++ More..
| Conservation Analysis |
No. of Species: 169
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 15390 | 15647 | + | NC_004545.1 | Buchnera aphidicola str. Bp (Baizongia pistaciae) |
| 2 | 911389 | 911646 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 3 | 1508218 | 1508475 | - | NZ_CP065640.1 | Serratia rubidaea |
| 4 | 5038383 | 5038640 | + | NZ_CP071320.1 | Serratia ureilytica |
| 5 | 4462205 | 4462462 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 6 | 5208483 | 5208740 | - | NZ_LT906479.1 | Serratia ficaria |
| 7 | 5255138 | 5255395 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 8 | 5441580 | 5441837 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 9 | 1801188 | 1801445 | - | NZ_CP011254.1 | Serratia fonticola |
| 10 | 3858315 | 3858572 | - | NZ_CP065534.1 | Lonsdalea populi |
| 11 | 5067185 | 5067442 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 12 | 4684307 | 4684564 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 13 | 4028387 | 4028644 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 14 | 4034663 | 4034920 | - | NZ_CP045720.1 | Pantoea eucalypti |
| 15 | 4048841 | 4049098 | - | NZ_CP038853.1 | Pantoea vagans |
| 16 | 3121188 | 3121445 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 17 | 4879155 | 4879412 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 18 | 4265068 | 4265325 | - | NZ_CP061511.1 | Mixta calida |
| 19 | 41784 | 42041 | - | NZ_CP026377.1 | Mixta gaviniae |
| 20 | 4608746 | 4609003 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 21 | 1588440 | 1588697 | + | NZ_CP007230.1 | Yersinia similis |
| 22 | 1601977 | 1602234 | + | NZ_CP019706.1 | Pantoea alhagi |
| 23 | 3423167 | 3423424 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 24 | 4569798 | 4570055 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 25 | 3771889 | 3772146 | - | NZ_CP028271.1 | Mixta intestinalis |
| 26 | 1041115 | 1041336 | + | NZ_CP023536.1 | Providencia alcalifaciens |
| 27 | 4284399 | 4284617 | - | NZ_LS483422.1 | Providencia heimbachae |
| 28 | 791877 | 792098 | + | NZ_CP029736.1 | Providencia rettgeri |
| 29 | 3786307 | 3786528 | - | NZ_CP031123.2 | Providencia huaxiensis |
| 30 | 3213546 | 3213803 | + | NZ_CP045300.1 | Kosakonia arachidis |
| 31 | 5414819 | 5415076 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 32 | 5315244 | 5315501 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 33 | 1442512 | 1442757 | - | NZ_CP063356.1 | Anaerobacillus isosaccharinicus |
| 34 | 4585146 | 4585403 | - | NC_017554.1 | Pantoea ananatis PA13 |
| 35 | 3742796 | 3743053 | + | NZ_LN907827.1 | Erwinia gerundensis |
| 36 | 1568150 | 1568410 | - | NZ_CP026364.1 | Proteus hauseri |
| 37 | 4776778 | 4777035 | - | NZ_LR134201.1 | Cedecea lapagei |
| 38 | 3444353 | 3444613 | - | NC_010554.1 | Proteus mirabilis HI4320 |
| 39 | 1732750 | 1733007 | - | NZ_CP042941.1 | Atlantibacter hermannii |
| 40 | 4680192 | 4680443 | - | NC_014829.1 | Evansella cellulosilytica DSM 2522 |
| 41 | 1702558 | 1702791 | - | NZ_CP041666.1 | Radiobacillus deserti |
| 42 | 5687792 | 5688052 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 43 | 4564821 | 4565078 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 44 | 4279371 | 4279631 | - | NZ_CP048796.1 | Providencia vermicola |
| 45 | 3306198 | 3306425 | - | NZ_AP021853.1 | Sporolactobacillus terrae |
| 46 | 4614329 | 4614541 | - | NC_011146.1 | Citrifermentans bemidjiense Bem |
| 47 | 3299588 | 3299845 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 48 | 5176860 | 5177117 | - | NZ_CP023525.1 | Cedecea neteri |
| 49 | 3943373 | 3943633 | - | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 50 | 48532 | 48789 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 51 | 6182251 | 6182508 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 52 | 4157224 | 4157481 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 53 | 4457779 | 4457991 | - | NZ_AP023213.1 | Citrifermentans bremense |
| 54 | 818901 | 819125 | - | NZ_CP022046.2 | Mammaliicoccus sciuri |
| 55 | 1341391 | 1341621 | + | NZ_CP068061.1 | Mammaliicoccus vitulinus |
| 56 | 4786 | 5013 | + | NC_017583.1 | Spirochaeta thermophila DSM 6578 |
| 57 | 2948168 | 2948395 | + | NC_002570.2 | Alkalihalobacillus halodurans C-125 |
| 58 | 3519818 | 3520045 | + | NZ_CP024109.1 | Bacillus cytotoxicus |
| 59 | 3397828 | 3398052 | - | NZ_CP011041.1 | Pseudoalteromonas tetraodonis |
| 60 | 3610258 | 3610464 | - | NZ_CP033065.1 | Pseudoalteromonas agarivorans |
| 61 | 3668011 | 3668217 | - | NZ_CP023464.1 | Pseudoalteromonas atlantica |
| 62 | 3719331 | 3719537 | - | NZ_CP011028.1 | Pseudoalteromonas espejiana DSM 9414 |
| 63 | 3490191 | 3490418 | + | NZ_LT603683.1 | Bacillus glycinifermentans |
| 64 | 2239161 | 2239394 | + | NZ_CP027770.1 | Staphylococcus felis |
| 65 | 5316293 | 5316550 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 66 | 5375323 | 5375580 | - | NZ_LR134494.1 | Serratia quinivorans |
| 67 | 3402347 | 3402622 | - | NZ_CP011030.1 | Pseudoalteromonas issachenkonii |
| 68 | 2285533 | 2285790 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 69 | 2019453 | 2019677 | - | NZ_AP017312.1 | Aneurinibacillus soli |
| 70 | 4702421 | 4702678 | + | NZ_CP032487.1 | Yersinia hibernica |
| 71 | 4752805 | 4753062 | - | NZ_CP046293.1 | Yersinia intermedia |
| 72 | 913241 | 913510 | - | NC_014761.1 | Oceanithermus profundus DSM 14977 |
| 73 | 4671320 | 4671577 | + | NZ_CP043727.1 | Yersinia canariae |
| 74 | 4734092 | 4734349 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 75 | 2844527 | 2844784 | + | NZ_CP009787.1 | Yersinia rohdei |
| 76 | 2720223 | 2720480 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 77 | 1278600 | 1278857 | - | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 78 | 4633523 | 4633750 | + | NZ_CP024035.1 | Priestia aryabhattai |
| 79 | 2337722 | 2337946 | + | NZ_CP012152.1 | Anoxybacillus gonensis |
| 80 | 3631934 | 3632140 | - | NZ_CP027523.1 | Pseudoalteromonas carrageenovora |
| 81 | 4292832 | 4293074 | - | NZ_CP011388.1 | Paenibacillus swuensis |
| 82 | 378272 | 378502 | - | NZ_CP031092.1 | Salicibibacter kimchii |
| 83 | 2961776 | 2961991 | + | NZ_CP053376.1 | Bacillus amyloliquefaciens |
| 84 | 4477091 | 4477306 | - | NZ_CP046670.1 | Alteromonas mediterranea |
| 85 | 2104048 | 2104257 | - | NZ_AP017470.1 | Thermotomaculum hydrothermale |
| 86 | 4224192 | 4224419 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 87 | 3138097 | 3138324 | + | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 88 | 1023954 | 1024169 | - | NZ_CP011937.1 | Bacillus velezensis |
| 89 | 3775205 | 3775447 | + | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 90 | 3549052 | 3549261 | - | NZ_CP014150.1 | Paeniclostridium sordellii |
| 91 | 1335688 | 1335900 | + | NC_008789.1 | Halorhodospira halophila SL1 |
| 92 | 1069595 | 1069843 | - | NZ_CP035288.1 | Staphylococcus epidermidis |
| 93 | 4485863 | 4486105 | - | NZ_CP015581.1 | Tatumella citrea |
| 94 | 2943395 | 2943622 | + | NZ_CP048852.1 | Bacillus tequilensis |
| 95 | 3213618 | 3213866 | - | NC_007481.1 | Pseudoalteromonas translucida |
| 96 | 3519874 | 3520122 | - | NZ_CP011036.1 | Pseudoalteromonas nigrifaciens |
| 97 | 3658166 | 3658384 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 98 | 4067450 | 4067665 | - | NC_011898.1 | Ruminiclostridium cellulolyticum H10 |
| 99 | 895653 | 895904 | - | NZ_CP020388.1 | Pluralibacter gergoviae |
| 100 | 3852968 | 3853210 | + | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 101 | 1031115 | 1031333 | + | NZ_CP028103.1 | Fusobacterium varium ATCC 27725 |
| 102 | 618214 | 618474 | - | NZ_CP022355.1 | Paraphotobacterium marinum |
| 103 | 1375275 | 1375517 | + | NZ_CP040098.1 | Desulfoglaeba alkanexedens ALDC |
| 104 | 3011311 | 3011538 | + | NZ_CP033052.1 | Bacillus vallismortis |
| 105 | 1608814 | 1609065 | + | NC_014925.1 | Staphylococcus pseudintermedius HKU10-03 |
| 106 | 2941799 | 2942026 | + | NZ_CP034943.1 | Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 |
| 107 | 4194540 | 4194758 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 108 | 3017433 | 3017660 | + | NZ_CP013984.1 | Bacillus inaquosorum |
| 109 | 2414214 | 2414438 | + | NZ_CP022437.1 | Virgibacillus necropolis |
| 110 | 876224 | 876433 | - | NZ_CP016020.1 | Bacillus weihaiensis |
| 111 | 3576106 | 3576321 | - | NZ_CP016502.1 | Acetivibrio thermocellus DSM 2360 |
| 112 | 15042 | 15296 | - | NC_011566.1 | Shewanella piezotolerans WP3 |
| 113 | 1875765 | 1876001 | - | NZ_CP029797.1 | Paraliobacillus zengyii |
| 114 | 3839506 | 3839736 | - | NZ_CP011025.1 | Pseudoalteromonas arctica A 37-1-2 |
| 115 | 1877437 | 1877661 | + | NZ_CP019628.1 | Pseudoalteromonas aliena |
| 116 | 5063433 | 5063693 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 117 | 4307502 | 4307720 | - | NZ_CP008849.1 | Alteromonas australica |
| 118 | 2932283 | 2932510 | + | NZ_CP051464.1 | Bacillus mojavensis |
| 119 | 3155968 | 3156195 | - | NZ_CP029364.1 | Bacillus halotolerans |
| 120 | 1444430 | 1444639 | + | NZ_CP029462.1 | Megasphaera stantonii |
| 121 | 279506 | 279715 | + | NZ_CP028106.1 | Fusobacterium gonidiaformans ATCC 25563 |
| 122 | 1890260 | 1890520 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 123 | 8130473 | 8130700 | - | NZ_CP023445.1 | Actinosynnema pretiosum |
| 124 | 8247043 | 8247270 | - | NC_013093.1 | Actinosynnema mirum DSM 43827 |
| 125 | 505450 | 505680 | + | NZ_CP060711.1 | Thermomonas brevis |
| 126 | 4971483 | 4971731 | - | NC_015554.1 | Alteromonas naphthalenivorans |
| 127 | 385708 | 385926 | - | NZ_CP061799.1 | Desulfonema limicola |
| 128 | 3383803 | 3384018 | - | NC_014098.1 | Kyrpidia tusciae DSM 2912 |
| 129 | 2777752 | 2777964 | - | NZ_CP029487.1 | Eubacterium maltosivorans |
| 130 | 3624762 | 3624977 | - | NZ_CP019699.1 | Novibacillus thermophilus |
| 131 | 3276505 | 3276732 | + | NZ_CP023665.1 | Bacillus paralicheniformis |
| 132 | 1700531 | 1700743 | + | NZ_LT906444.1 | Listeria welshimeri |
| 133 | 1670625 | 1670900 | + | NC_013891.1 | Listeria seeligeri serovar 1/2b str. SLCC3954 |
| 134 | 4647946 | 4648194 | - | NZ_CP014322.1 | Alteromonas addita |
| 135 | 3350829 | 3351068 | - | NZ_CP024955.1 | Kyrpidia spormannii |
| 136 | 2354889 | 2355104 | - | NZ_CP035130.1 | Gudongella oleilytica |
| 137 | 637802 | 638011 | + | NZ_CP009240.1 | Megasphaera elsdenii 14-14 |
| 138 | 1302554 | 1302793 | - | NZ_CP013816.1 | Piscirickettsia salmonis |
| 139 | 2313528 | 2313737 | - | NC_013740.1 | Acidaminococcus fermentans DSM 20731 |
| 140 | 2559512 | 2559724 | - | NZ_CP017237.1 | Moorella thermoacetica |
| 141 | 2229390 | 2229650 | - | NZ_LR134167.1 | Avibacterium volantium |
| 142 | 1160565 | 1160801 | - | NZ_CP016543.2 | Planococcus donghaensis |
| 143 | 1127 | 1354 | + | NZ_CP031769.1 | Salinimonas sediminis |
| 144 | 2220472 | 2220699 | + | NZ_CP030753.1 | Actinobacillus pleuropneumoniae |
| 145 | 5278066 | 5278275 | - | NC_011830.1 | Desulfitobacterium hafniense DCB-2 |
| 146 | 303654 | 303863 | - | NZ_CP028107.1 | Fusobacterium necrophorum subsp. funduliforme |
| 147 | 5461441 | 5461650 | - | NZ_CP020953.1 | Clostridium drakei |
| 148 | 4609870 | 4610079 | - | NZ_CP011803.1 | Clostridium carboxidivorans P7 |
| 149 | 4459940 | 4460149 | + | NZ_CP009933.1 | Clostridium scatologenes |
| 150 | 4122165 | 4122434 | - | NZ_CP036536.1 | Salinimonas lutimaris |
| 151 | 4816281 | 4816496 | - | NZ_CP061336.1 | Ruminiclostridium herbifermentans |
| 152 | 4316152 | 4316364 | - | NC_014624.2 | Eubacterium callanderi |
| 153 | 1392710 | 1392940 | + | NC_018704.1 | Amphibacillus xylanus NBRC 15112 |
| 154 | 1584248 | 1584463 | - | NZ_CP041660.1 | Catenovulum sediminis |
| 155 | 1898100 | 1898354 | - | NC_015499.1 | Thermodesulfobium narugense DSM 14796 |
| 156 | 293187 | 293432 | + | NZ_CP072844.1 | Psychrosphaera aestuarii |
| 157 | 2286157 | 2286417 | - | NZ_LT906448.1 | Pasteurella dagmatis |
| 158 | 503257 | 503484 | + | NZ_CP028926.1 | Pasteurella multocida |
| 159 | 3563592 | 3563801 | - | NZ_CP048103.1 | Kroppenstedtia eburnea |
| 160 | 4750305 | 4750514 | - | NC_005085.1 | Chromobacterium violaceum ATCC 12472 |
| 161 | 1969451 | 1969660 | + | NZ_CP029495.1 | Chromobacterium phragmitis |
| 162 | 3318116 | 3318325 | + | NZ_CP017707.1 | Chromobacterium vaccinii |
| 163 | 1220828 | 1221037 | - | NZ_LT996885.1 | Dialister massiliensis |
| 164 | 688172 | 688384 | - | NZ_CP019962.1 | Eubacterium limosum |
| 165 | 2609279 | 2609494 | + | NC_016620.1 | Halobacteriovorax marinus SJ |
| 166 | 1774060 | 1774281 | - | NZ_CP020921.1 | Thermodesulfobium acidiphilum |
| 167 | 3405699 | 3405923 | - | NC_015172.1 | Syntrophobotulus glycolicus DSM 8271 |
| 168 | 2758965 | 2759174 | - | NC_015519.1 | Tepidanaerobacter acetatoxydans Re1 |
| 169 | 40741 | 40962 | - | NZ_CP031518.1 | Treponema ruminis |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_004545.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00825.20 | 0.7 | 119 | -24 | same-strand | Ribonuclease P |
| 2 | PF02096.22 | 0.79 | 134 | 3.0 | same-strand | 60Kd inner membrane protein |
| 3 | PF12631.9 | 0.74 | 125 | 1754 | same-strand | MnmE helical domain |
| 4 | PF10396.11 | 0.75 | 126 | 1753.5 | same-strand | GTP-binding protein TrmE N-terminus |
++ More..