Protein Information |
Information Type | Description |
---|---|
Protein name | Antitoxin YefM |
NCBI Accession ID | BA000022.2 |
Organism | Synechocystis sp. (strain PCC 6803 / Kazusa) |
Left | 2074694 |
Right | 2074957 |
Strand | + |
Nucleotide Sequence | ATGAAAGCAATTACAACCACCCAAGCCAAAGATCATTTGGATGAATTAATTAATGCTGTCATTTCTGATCTAGAACCAACCATCGTTAGCAACAATCAAGGTCAGCAGGCGGTATTAATATCATTGGATGAATTTAATTCTTGGCAAGAAACCCTTTACTTACTCTCTAATCCAACCAACGCAGAACATTTAATGGCATCGATTAAGCAAGCTGAAACTGGACAGATCATTAAGCAAAAATTACCAGATTTATTGGAACTGTGA |
Sequence | MKAITTTQAKDHLDELINAVISDLEPTIVSNNQGQQAVLISLDEFNSWQETLYLLSNPTNAEHLMASIKQAETGQIIKQKLPDLLEL |
Source of smORF | Swiss-Prot |
Function | Antitoxin component of a type II toxin-antitoxin (TA) system. A probable antitoxin for the putative mRNA interferase YeoB (By similarity). {ECO:0000250}. |
Pubmed ID | 8590279 8905231 |
Domain | CDD:415595 |
Functional Category | Antitoxin_type_2 |
Uniprot ID | P58235 |
ORF Length (Amino Acid) | 87 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 5697565 | 5697819 | + | NC_019771.1 | Anabaena cylindrica PCC 7122 |
2 | 3950409 | 3950663 | - | NZ_CP061800.1 | Desulfonema magnum |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF06769.16 | 1.0 | 2 | -3.0 | same-strand | YoeB-like toxin of bacterial type II toxin-antitoxin system |