Result : P56100
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Cytochrome bd-I ubiquinol oxidase subunit X (EC 7.1.1.7) (Cytochrome bd-I oxidase subunit X) (Cytochrome d ubiquinol oxidase subunit X) |
| NCBI Accession ID | U00096.3 |
| Organism | Escherichia coli (strain K12) |
| Left | 774196 |
| Right | 774309 |
| Strand | + |
| Nucleotide Sequence | ATGTGGTATTTCGCATGGATTCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGA |
| Sequence | MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI |
| Source of smORF | Swiss-Prot |
| Function | Required for correct functioning of cytochrome bd-I oxidase. This protein and AppX may have some functional overlap. |
| Pubmed ID | 2843510 9278503 16738553 7984428 9068659 19121005 19734316 21778229 23749980 |
| Domain | CDD:413167 |
| Functional Category | Others |
| Uniprot ID | P56100 |
| ORF Length (Amino Acid) | 37 |
++ More..
| Conservation Analysis |
No. of Species: 222
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 858703 | 858816 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 2 | 760907 | 761020 | + | NZ_AP014857.1 | Escherichia albertii |
| 3 | 774196 | 774309 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 4 | 582923 | 583036 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 5 | 1406549 | 1406662 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 6 | 2967583 | 2967696 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 7 | 1418801 | 1418914 | + | NZ_LR134340.1 | Escherichia marmotae |
| 8 | 3893894 | 3894007 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 9 | 3232109 | 3232222 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 10 | 4296318 | 4296431 | + | NZ_CP033744.1 | Citrobacter freundii |
| 11 | 810255 | 810368 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 12 | 2224575 | 2224688 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 13 | 1403517 | 1403630 | + | NZ_AP023184.1 | Buttiauxella agrestis |
| 14 | 1879506 | 1879619 | - | NZ_CP038469.1 | Citrobacter tructae |
| 15 | 4216005 | 4216121 | - | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 16 | 1464052 | 1464165 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 17 | 3745639 | 3745752 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 18 | 3501767 | 3501880 | - | NZ_CP023525.1 | Cedecea neteri |
| 19 | 812270 | 812383 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 20 | 3295417 | 3295530 | + | NZ_CP053416.1 | Salmonella bongori |
| 21 | 3277829 | 3277942 | - | NZ_LR134201.1 | Cedecea lapagei |
| 22 | 804584 | 804697 | + | NC_013716.1 | Citrobacter rodentium ICC168 |
| 23 | 1485108 | 1485221 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 24 | 3869542 | 3869655 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 25 | 3361856 | 3361969 | + | NZ_CP026047.1 | Raoultella planticola |
| 26 | 3719094 | 3719207 | - | NZ_CP041247.1 | Raoultella electrica |
| 27 | 276989 | 277102 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 28 | 1372730 | 1372843 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 29 | 1564043 | 1564156 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 30 | 1321086 | 1321199 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 31 | 1525304 | 1525417 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 32 | 1189971 | 1190084 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 33 | 317075 | 317188 | - | NZ_CP042941.1 | Atlantibacter hermannii |
| 34 | 4087670 | 4087783 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 35 | 4249936 | 4250049 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 36 | 4009053 | 4009166 | - | NZ_CP050508.1 | Raoultella terrigena |
| 37 | 3891034 | 3891147 | - | NZ_CP054254.1 | Klebsiella variicola |
| 38 | 3671903 | 3672016 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 39 | 1461267 | 1461380 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 40 | 1598563 | 1598676 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 41 | 2144886 | 2144999 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 42 | 3437603 | 3437716 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 43 | 1392110 | 1392223 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 44 | 1360328 | 1360441 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 45 | 1250521 | 1250634 | + | NZ_CP065534.1 | Lonsdalea populi |
| 46 | 4081855 | 4081968 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 47 | 2991157 | 2991270 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 48 | 1351210 | 1351323 | + | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 49 | 1642265 | 1642381 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 50 | 3634810 | 3634926 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 51 | 1395343 | 1395456 | + | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 52 | 550936 | 551049 | + | NZ_CP017279.1 | Enterobacter ludwigii |
| 53 | 2067648 | 2067761 | - | NZ_CP027107.1 | Cronobacter sakazakii |
| 54 | 1350910 | 1351023 | + | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 55 | 2789843 | 2789956 | - | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 56 | 2694870 | 2694983 | - | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 57 | 3219456 | 3219569 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 58 | 2737115 | 2737228 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 59 | 2158724 | 2158837 | - | NZ_CP067057.1 | Rahnella aceris |
| 60 | 1325737 | 1325850 | + | NZ_LR134494.1 | Serratia quinivorans |
| 61 | 2978811 | 2978927 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 62 | 3145302 | 3145409 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 63 | 1327001 | 1327114 | + | NC_015968.1 | Enterobacter soli |
| 64 | 2324012 | 2324125 | + | NZ_CP023009.1 | Lonsdalea britannica |
| 65 | 1225258 | 1225371 | + | NZ_LN907827.1 | Erwinia gerundensis |
| 66 | 3552924 | 3553037 | + | NZ_CP011254.1 | Serratia fonticola |
| 67 | 1197338 | 1197451 | - | NZ_CP014136.1 | Gibbsiella quercinecans |
| 68 | 4663865 | 4663978 | - | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 69 | 3523389 | 3523505 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 70 | 1725714 | 1725818 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 71 | 1367034 | 1367147 | + | NC_015567.1 | Serratia plymuthica AS9 |
| 72 | 1266604 | 1266717 | + | NZ_CP048784.1 | Serratia liquefaciens |
| 73 | 777129 | 777245 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 74 | 2605848 | 2605955 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 75 | 133541 | 133657 | - | NZ_CP047495.1 | Pectobacterium brasiliense |
| 76 | 3283084 | 3283188 | - | NZ_CP047495.1 | Pectobacterium brasiliense |
| 77 | 331519 | 331635 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 78 | 2052512 | 2052616 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 79 | 1579187 | 1579303 | + | NZ_CP034938.1 | Pectobacterium odoriferum |
| 80 | 3235175 | 3235279 | + | NZ_CP034938.1 | Pectobacterium odoriferum |
| 81 | 1531529 | 1531645 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 82 | 3279136 | 3279240 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 83 | 3345108 | 3345224 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 84 | 1612336 | 1612440 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 85 | 534018 | 534131 | + | NZ_CP031123.2 | Providencia huaxiensis |
| 86 | 1965758 | 1965871 | + | NZ_CP029736.1 | Providencia rettgeri |
| 87 | 1361805 | 1361921 | + | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 88 | 3058956 | 3059072 | - | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 89 | 1527082 | 1527198 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 90 | 3118896 | 3119003 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 91 | 1430716 | 1430832 | + | NZ_CP031560.1 | Dickeya dianthicola |
| 92 | 2277926 | 2278042 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 93 | 233296 | 233409 | - | NZ_CP019706.1 | Pantoea alhagi |
| 94 | 1322822 | 1322935 | + | NZ_CP038662.1 | Serratia nematodiphila |
| 95 | 1402728 | 1402841 | + | NZ_LT906479.1 | Serratia ficaria |
| 96 | 628531 | 628644 | + | NZ_CP016948.1 | Serratia surfactantfaciens |
| 97 | 3736032 | 3736145 | - | NZ_CP071320.1 | Serratia ureilytica |
| 98 | 1454905 | 1455015 | + | NZ_CP026377.1 | Mixta gaviniae |
| 99 | 1359360 | 1359470 | + | NZ_CP061511.1 | Mixta calida |
| 100 | 3394501 | 3394617 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 101 | 747392 | 747508 | + | NZ_CP015749.1 | Pectobacterium parmentieri |
| 102 | 2449239 | 2449340 | + | NZ_CP015749.1 | Pectobacterium parmentieri |
| 103 | 3202416 | 3202538 | - | NZ_LS483422.1 | Providencia heimbachae |
| 104 | 1350166 | 1350282 | - | NZ_CP009460.1 | Dickeya fangzhongdai |
| 105 | 1451806 | 1451922 | + | NC_014500.1 | Dickeya dadantii 3937 |
| 106 | 3556230 | 3556346 | + | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 107 | 3310287 | 3310403 | - | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 108 | 3198865 | 3198978 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 109 | 2983800 | 2983916 | - | NZ_LT615367.1 | Dickeya aquatica |
| 110 | 2789999 | 2790112 | + | NZ_CP065640.1 | Serratia rubidaea |
| 111 | 3227584 | 3227697 | - | NC_017554.1 | Pantoea ananatis PA13 |
| 112 | 1482251 | 1482361 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 113 | 3921532 | 3921654 | - | NZ_CP023536.1 | Providencia alcalifaciens |
| 114 | 1389736 | 1389849 | + | NZ_CP025799.1 | Dickeya zeae |
| 115 | 2837605 | 2837721 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 116 | 3308131 | 3308244 | - | NZ_CP048796.1 | Providencia vermicola |
| 117 | 2952617 | 2952730 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 118 | 1318924 | 1319034 | + | NZ_CP015581.1 | Tatumella citrea |
| 119 | 3427298 | 3427414 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 120 | 3318804 | 3318920 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 121 | 4112318 | 4112431 | + | NZ_CP049115.1 | Pantoea stewartii |
| 122 | 623526 | 623642 | + | NZ_CP028271.1 | Mixta intestinalis |
| 123 | 1006994 | 1007107 | + | NZ_CP016043.1 | Edwardsiella hoshinae |
| 124 | 3345395 | 3345511 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 125 | 1196995 | 1197111 | + | NZ_CP034035.1 | Brenneria rubrifaciens |
| 126 | 1041848 | 1041964 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 127 | 1962342 | 1962470 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 128 | 1743780 | 1743902 | + | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 129 | 2700330 | 2700443 | + | NZ_CP023706.1 | Edwardsiella tarda |
| 130 | 2709658 | 2709774 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 131 | 1318678 | 1318794 | + | NC_012880.1 | Musicola paradisiaca Ech703 |
| 132 | 78301 | 78411 | - | NZ_CP014056.2 | Grimontia hollisae |
| 133 | 2661491 | 2661601 | - | NZ_CP031416.1 | Gallaecimonas mangrovi |
| 134 | 4497905 | 4498021 | - | NZ_CP045302.1 | Azotobacter salinestris |
| 135 | 631559 | 631669 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 136 | 3315358 | 3315474 | - | NZ_CP022358.1 | Shewanella bicestrii |
| 137 | 2597354 | 2597467 | - | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 138 | 1351127 | 1351237 | + | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 139 | 1955170 | 1955286 | + | NC_010506.1 | Shewanella woodyi ATCC 51908 |
| 140 | 2407573 | 2407686 | - | NZ_CP020373.1 | Shewanella khirikhana |
| 141 | 2816027 | 2816140 | - | NC_008700.1 | Shewanella amazonensis SB2B |
| 142 | 2749331 | 2749444 | - | NZ_CP069213.1 | Shewanella litorisediminis |
| 143 | 2972286 | 2972399 | - | NC_012691.1 | Tolumonas auensis DSM 9187 |
| 144 | 1477566 | 1477673 | + | NZ_CP046268.1 | Vibrio spartinae |
| 145 | 1717201 | 1717311 | + | NZ_CP034015.1 | Shewanella livingstonensis |
| 146 | 1342223 | 1342336 | + | NZ_CP050150.1 | Hafnia alvei |
| 147 | 3650422 | 3650538 | - | NC_016901.1 | Shewanella baltica OS678 |
| 148 | 1494095 | 1494214 | + | NC_007954.1 | Shewanella denitrificans OS217 |
| 149 | 2273158 | 2273265 | - | NZ_AP014635.1 | Vibrio tritonius |
| 150 | 4366785 | 4366901 | - | NZ_CP014782.1 | Shewanella psychrophila |
| 151 | 701461 | 701574 | - | NZ_CP036200.1 | Shewanella maritima |
| 152 | 1104445 | 1104558 | + | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 153 | 75087 | 75194 | + | NZ_CP046793.1 | Vibrio metschnikovii |
| 154 | 1064838 | 1064945 | + | NZ_CP022741.1 | Vibrio qinghaiensis |
| 155 | 3757120 | 3757236 | - | NC_009831.1 | Shewanella sediminis HAW-EB3 |
| 156 | 1512213 | 1512329 | + | NC_009092.1 | Shewanella loihica PV-4 |
| 157 | 2749722 | 2749832 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 158 | 2918644 | 2918760 | - | NZ_CP022272.1 | Shewanella marisflavi |
| 159 | 1956932 | 1957039 | - | NZ_CP018312.1 | Vibrio rotiferianus |
| 160 | 1184058 | 1184165 | + | NZ_CP045350.1 | Vibrio aquimaris |
| 161 | 1939949 | 1940056 | - | NZ_AP019651.1 | Vibrio taketomensis |
| 162 | 1836533 | 1836640 | - | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 163 | 1493443 | 1493550 | - | NZ_CP035688.1 | Vibrio metoecus |
| 164 | 1650614 | 1650721 | - | NZ_AP018685.1 | Vibrio rumoiensis |
| 165 | 1066367 | 1066474 | + | NZ_AP018689.1 | Vibrio aphrogenes |
| 166 | 1394085 | 1394198 | + | NZ_CP005974.1 | Photobacterium gaetbulicola Gung47 |
| 167 | 1092987 | 1093094 | + | NZ_CP032093.1 | Vibrio alfacsensis |
| 168 | 624252 | 624365 | + | NC_010554.1 | Proteus mirabilis HI4320 |
| 169 | 3303014 | 3303124 | - | NZ_CP041036.1 | Shewanella polaris |
| 170 | 1071959 | 1072066 | - | NZ_LT960611.1 | Vibrio tapetis subsp. tapetis |
| 171 | 1091559 | 1091666 | - | NZ_CP025792.1 | Vibrio jasicida 090810c |
| 172 | 1356184 | 1356291 | + | NZ_CP009467.1 | Vibrio harveyi |
| 173 | 699461 | 699568 | - | NZ_CP019959.1 | Vibrio owensii |
| 174 | 1173897 | 1174004 | + | NZ_CP039700.1 | Vibrio cyclitrophicus |
| 175 | 1176755 | 1176862 | + | NC_011753.2 | Vibrio atlanticus |
| 176 | 1193222 | 1193329 | + | NZ_CP009354.1 | Vibrio tubiashii ATCC 19109 |
| 177 | 2156118 | 2156225 | - | NZ_CP031781.1 | Vibrio parahaemolyticus |
| 178 | 1631821 | 1631928 | + | NZ_CP040990.1 | Vibrio furnissii |
| 179 | 1069240 | 1069347 | + | NZ_CP030788.1 | Vibrio campbellii |
| 180 | 2553510 | 2553617 | - | NC_013456.1 | Vibrio antiquarius |
| 181 | 2245890 | 2245997 | - | NZ_CP044069.1 | Vibrio vulnificus |
| 182 | 1779647 | 1779754 | - | NZ_CP009977.1 | Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 |
| 183 | 869962 | 870069 | + | NZ_CP016414.1 | Vibrio scophthalmi |
| 184 | 257658 | 257765 | - | NZ_CP065150.1 | Vibrio kanaloae |
| 185 | 1610385 | 1610492 | - | NZ_CP014035.2 | Vibrio fluvialis |
| 186 | 1879298 | 1879405 | - | NZ_CP040021.1 | Salinivibrio kushneri |
| 187 | 746717 | 746824 | + | NZ_AP019657.1 | Vibrio ponticus |
| 188 | 1670223 | 1670330 | - | NZ_CP033078.1 | Vibrio zhugei |
| 189 | 2028327 | 2028434 | + | NC_011312.1 | Aliivibrio salmonicida LFI1238 |
| 190 | 4545784 | 4545897 | - | NZ_CP037952.1 | Parashewanella spongiae |
| 191 | 1613052 | 1613168 | + | NC_009901.1 | Shewanella pealeana ATCC 700345 |
| 192 | 2692841 | 2692954 | + | NZ_CP026364.1 | Proteus hauseri |
| 193 | 3028263 | 3028373 | - | NZ_CP061081.1 | Marinomonas arctica |
| 194 | 5349737 | 5349847 | + | NZ_AP022642.1 | Pseudomonas otitidis |
| 195 | 2150401 | 2150511 | - | NZ_CP072844.1 | Psychrosphaera aestuarii |
| 196 | 1669112 | 1669228 | + | NC_010334.1 | Shewanella halifaxensis HAW-EB4 |
| 197 | 4213093 | 4213200 | - | NZ_CP046670.1 | Alteromonas mediterranea |
| 198 | 773320 | 773430 | - | NZ_CP070273.1 | Marinomonas foliarum |
| 199 | 2517231 | 2517341 | - | NC_015559.1 | Marinomonas posidonica IVIA-Po-181 |
| 200 | 1634606 | 1634722 | - | NZ_CP011835.1 | Azotobacter chroococcum |
| 201 | 3983656 | 3983769 | - | NZ_CP008849.1 | Alteromonas australica |
| 202 | 1974180 | 1974296 | - | NC_012560.1 | Azotobacter vinelandii DJ |
| 203 | 2720156 | 2720266 | + | NZ_CP061941.1 | Marinomonas algicola |
| 204 | 1373387 | 1373485 | - | NZ_CP043869.1 | Neptunomonas concharum |
| 205 | 3861962 | 3862069 | - | NZ_CP060084.1 | Teredinibacter haidensis |
| 206 | 4548924 | 4549037 | - | NC_015554.1 | Alteromonas naphthalenivorans |
| 207 | 203249 | 203359 | - | NZ_CP019937.1 | Ketogulonicigenium robustum |
| 208 | 1601677 | 1601790 | + | NC_010995.1 | Cellvibrio japonicus Ueda107 |
| 209 | 1090017 | 1090133 | + | NZ_CP012362.1 | Oblitimonas alkaliphila |
| 210 | 2635210 | 2635326 | + | NZ_AP018724.1 | Sulfurivermis fontis |
| 211 | 204734 | 204841 | - | NC_017957.2 | Tistrella mobilis KA081020-065 |
| 212 | 4354646 | 4354759 | - | NZ_CP014322.1 | Alteromonas addita |
| 213 | 1263694 | 1263801 | - | NZ_LR699114.1 | Aquicella lusitana |
| 214 | 925424 | 925543 | - | NZ_LN681225.1 | Legionella hackeliae |
| 215 | 314268 | 314396 | - | NZ_CP012908.1 | Ketogulonicigenium vulgare |
| 216 | 75089 | 75214 | - | NZ_LN614830.1 | Tatlockia micdadei |
| 217 | 1171334 | 1171441 | - | NZ_CP018311.1 | Vibrio rotiferianus |
| 218 | 1825492 | 1825599 | + | NZ_CP019960.1 | Vibrio owensii |
| 219 | 1500325 | 1500429 | + | NZ_LR134531.1 | Pragia fontium |
| 220 | 2318853 | 2318960 | - | NZ_LS483470.1 | Leminorella richardii |
| 221 | 1900412 | 1900516 | + | NZ_CP041690.1 | Youhaiella tibetensis |
| 222 | 1911637 | 1911744 | + | NZ_CP035900.1 | Burkholderia glumae |
| 223 | 2391125 | 2391226 | - | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 224 | 1085132 | 1085251 | - | NZ_CP039268.1 | Thermochromatium tepidum ATCC 43061 |
| 225 | 1497883 | 1497987 | + | NZ_LT906442.1 | Legionella waltersii |
| 226 | 2196607 | 2196708 | - | NZ_CP029185.2 | Limnobaculum parvum |
| 227 | 3470620 | 3470733 | + | NZ_CP011412.1 | Sedimenticola thiotaurini |
| 228 | 404753 | 404887 | + | NZ_CP012023.1 | Celeribacter marinus |
| 229 | 1001388 | 1001504 | - | NZ_CP049244.1 | Rhizobium pseudoryzae |
| 230 | 1829062 | 1829163 | + | NZ_CP047241.1 | Aquitalea denitrificans |
| 231 | 1225834 | 1225944 | + | NZ_CP016878.1 | Xanthomonas hortorum |
| 232 | 3819038 | 3819160 | + | NZ_CP022196.1 | Celeribacter ethanolicus |
| 233 | 1163779 | 1163889 | - | NZ_CP025611.1 | Niveispirillum cyanobacteriorum |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01654.19 | 1.0 | 221 | 1170.0 | same-strand | Cytochrome bd terminal oxidase subunit I |
| 2 | PF02322.17 | 1.0 | 221 | 15.0 | same-strand | Cytochrome bd terminal oxidase subunit II |
| 3 | PF09600.12 | 0.73 | 163 | 0.0 | same-strand | Cyd operon protein YbgE (Cyd oper YbgE) |
| 4 | PF03061.24 | 0.69 | 153 | 442.0 | same-strand | Thioesterase superfamily |
| 5 | PF13279.8 | 0.69 | 153 | 442.0 | same-strand | Thioesterase-like superfamily |
| 6 | PF01618.18 | 0.74 | 165 | 841.5 | same-strand | MotA/TolQ/ExbB proton channel family |
| 7 | PF02472.18 | 0.74 | 164 | 1539 | same-strand | Biopolymer transport protein ExbD/TolR |
| 8 | PF06519.13 | 0.72 | 160 | 2028 | same-strand | TolA C-terminal |
++ More..