Result : A0KIV0
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | UPF0352 protein AHA_1665 |
| NCBI Accession ID | CP000462.1 |
| Organism | Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240) |
| Left | 1818820 |
| Right | 1819047 |
| Strand | - |
| Nucleotide Sequence | ATGCCCATCGTATCAAAGTACAATAACGAGCAGTTTGACGCCCTGATGAACGACCTGATCACCGCCCTGGAGAAGCACAAGGCGCCGGTGGATCTGAGTCTGATGGTGCTCGGCAACCTGACCACCAATATCATCAATGGCATGGCCCCGGCCCAGCGTCAGGCGATCACCGAAAAATACATCCAGGCGCTCACCGCCTCGGTGGATCATCGCCACGATGCTCACTGA |
| Sequence | MPIVSKYNNEQFDALMNDLITALEKHKAPVDLSLMVLGNLTTNIINGMAPAQRQAITEKYIQALTASVDHRHDAH |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl01175. Profile Description: Protein of unknown function (DUF1414). hypothetical protein; Provisional |
| Pubmed ID | 16980456 |
| Domain | CDD:412779 |
| Functional Category | Others |
| Uniprot ID | A0KIV0 |
| ORF Length (Amino Acid) | 75 |
++ More..
| Conservation Analysis |
No. of Species: 130
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1801506 | 1801733 | - | NZ_CP050851.1 | Aeromonas hydrophila |
| 2 | 3089719 | 3089946 | + | NZ_AP022188.1 | Aeromonas media |
| 3 | 1466159 | 1466386 | + | NZ_CP044060.1 | Aeromonas veronii |
| 4 | 1715341 | 1715568 | + | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 5 | 1828353 | 1828580 | + | NZ_CP051883.1 | Aeromonas salmonicida |
| 6 | 1583852 | 1584079 | - | NZ_LR134376.1 | Aeromonas encheleia |
| 7 | 2686892 | 2687122 | + | NZ_CP040449.1 | Aeromonas simiae |
| 8 | 1828517 | 1828744 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 9 | 3175725 | 3175952 | - | NZ_CP042941.1 | Atlantibacter hermannii |
| 10 | 2307332 | 2307559 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 11 | 3714328 | 3714555 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 12 | 1376778 | 1377005 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 13 | 1005414 | 1005644 | - | NZ_CP044399.1 | Moritella marina ATCC 15381 |
| 14 | 1587278 | 1587505 | - | NZ_CP054254.1 | Klebsiella variicola |
| 15 | 1536838 | 1537065 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 16 | 3114085 | 3114312 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 17 | 1497522 | 1497749 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 18 | 2830817 | 2831044 | + | NZ_LR134340.1 | Escherichia marmotae |
| 19 | 2284129 | 2284356 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 20 | 2293260 | 2293487 | + | NZ_AP014857.1 | Escherichia albertii |
| 21 | 3019194 | 3019421 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 22 | 245385 | 245612 | - | NZ_CP038469.1 | Citrobacter tructae |
| 23 | 4062041 | 4062268 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 24 | 1006953 | 1007180 | + | NZ_CP033744.1 | Citrobacter freundii |
| 25 | 348091 | 348321 | - | NZ_LS483250.1 | Moritella yayanosii |
| 26 | 1526927 | 1527154 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 27 | 2173374 | 2173601 | - | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 28 | 817275 | 817502 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 29 | 4776427 | 4776654 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 30 | 3426812 | 3427039 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 31 | 1282292 | 1282519 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 32 | 1581823 | 1582050 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 33 | 1636944 | 1637171 | - | NZ_CP050508.1 | Raoultella terrigena |
| 34 | 1566481 | 1566708 | - | NZ_CP041247.1 | Raoultella electrica |
| 35 | 1751120 | 1751347 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 36 | 3250580 | 3250807 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 37 | 2437765 | 2437992 | + | NC_013716.1 | Citrobacter rodentium ICC168 |
| 38 | 4711819 | 4712046 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 39 | 897188 | 897415 | - | NZ_CP051180.1 | Ferrimonas lipolytica |
| 40 | 4523742 | 4523969 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 41 | 2329115 | 2329342 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 42 | 2774211 | 2774438 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 43 | 1959539 | 1959757 | + | NZ_CP040021.1 | Salinivibrio kushneri |
| 44 | 4644366 | 4644593 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 45 | 3167153 | 3167380 | + | NC_015968.1 | Enterobacter soli |
| 46 | 3313129 | 3313356 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 47 | 2457484 | 2457711 | + | NZ_CP017279.1 | Enterobacter ludwigii |
| 48 | 309917 | 310144 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 49 | 904665 | 904892 | + | NZ_CP021377.1 | Oceanisphaera profunda |
| 50 | 3174708 | 3174935 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 51 | 3206190 | 3206417 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 52 | 568415 | 568642 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 53 | 3158075 | 3158302 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 54 | 4080283 | 4080510 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 55 | 3478923 | 3479150 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 56 | 111366 | 111593 | + | NZ_CP026047.1 | Raoultella planticola |
| 57 | 1779534 | 1779761 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 58 | 944527 | 944754 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 59 | 1585841 | 1586068 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 60 | 2857686 | 2857913 | + | NZ_CP012621.1 | Zobellella denitrificans |
| 61 | 2187500 | 2187727 | + | NZ_CP065534.1 | Lonsdalea populi |
| 62 | 1418848 | 1419075 | - | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 63 | 906717 | 906944 | - | NC_010554.1 | Proteus mirabilis HI4320 |
| 64 | 2960973 | 2961200 | - | NZ_CP026364.1 | Proteus hauseri |
| 65 | 1167260 | 1167490 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 66 | 3441533 | 3441760 | + | NZ_CP023009.1 | Lonsdalea britannica |
| 67 | 1385318 | 1385545 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 68 | 1502606 | 1502833 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 69 | 1270079 | 1270306 | + | NZ_CP009787.1 | Yersinia rohdei |
| 70 | 1686753 | 1686980 | - | NZ_CP043727.1 | Yersinia canariae |
| 71 | 236313 | 236540 | - | NZ_CP067057.1 | Rahnella aceris |
| 72 | 4164969 | 4165196 | + | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 73 | 3003587 | 3003814 | + | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 74 | 1655373 | 1655600 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 75 | 1168514 | 1168741 | - | NZ_CP032487.1 | Yersinia hibernica |
| 76 | 3246684 | 3246911 | - | NZ_CP007230.1 | Yersinia similis |
| 77 | 4837 | 5064 | - | NZ_CP021376.1 | Oceanisphaera avium |
| 78 | 3180204 | 3180431 | + | NZ_CP029736.1 | Providencia rettgeri |
| 79 | 1290009 | 1290230 | - | NZ_CP046531.1 | Mannheimia ovis |
| 80 | 1453589 | 1453810 | - | NZ_CP055305.1 | Mannheimia pernigra |
| 81 | 1999915 | 2000142 | + | NZ_CP031123.2 | Providencia huaxiensis |
| 82 | 2994937 | 2995164 | + | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 83 | 1629242 | 1629454 | + | NZ_CP031961.1 | Pseudoalteromonas tunicata |
| 84 | 1429205 | 1429426 | - | NZ_CP061280.1 | Mannheimia bovis |
| 85 | 1965258 | 1965485 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 86 | 1851356 | 1851583 | - | NZ_LS483422.1 | Providencia heimbachae |
| 87 | 2601079 | 2601306 | + | NZ_LR134531.1 | Pragia fontium |
| 88 | 2870915 | 2871142 | + | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 89 | 1605776 | 1605997 | + | NZ_CP015029.1 | Frederiksenia canicola |
| 90 | 960050 | 960271 | - | NZ_CP006944.1 | Mannheimia varigena USDA-ARS-USMARC-1312 |
| 91 | 233054 | 233278 | - | NC_011852.1 | Glaesserella parasuis SH0165 |
| 92 | 1555228 | 1555455 | - | NZ_CP071320.1 | Serratia ureilytica |
| 93 | 2828272 | 2828499 | + | NZ_CP016948.1 | Serratia surfactantfaciens |
| 94 | 3521177 | 3521404 | + | NZ_CP038662.1 | Serratia nematodiphila |
| 95 | 1318952 | 1319167 | + | NZ_CP006954.1 | Bibersteinia trehalosi USDA-ARS-USMARC-188 |
| 96 | 1382278 | 1382505 | - | NZ_LR134201.1 | Cedecea lapagei |
| 97 | 853724 | 853945 | + | NZ_CP009159.1 | Actinobacillus suis ATCC 33415 |
| 98 | 2885074 | 2885301 | - | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 99 | 894074 | 894295 | + | NZ_CP007715.1 | Actinobacillus equuli subsp. equuli |
| 100 | 1419329 | 1419556 | - | NZ_CP023525.1 | Cedecea neteri |
| 101 | 2375394 | 2375588 | + | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 102 | 1709375 | 1709587 | + | NZ_CP011039.1 | Pseudoalteromonas spongiae UST010723-006 |
| 103 | 1439209 | 1439427 | - | NZ_CP005974.1 | Photobacterium gaetbulicola Gung47 |
| 104 | 1690017 | 1690256 | + | NZ_CP029347.1 | Saliniradius amylolyticus |
| 105 | 2457197 | 2457409 | + | NZ_CP009888.1 | Pseudoalteromonas piratica |
| 106 | 1319981 | 1320208 | + | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 107 | 2362712 | 2362924 | + | NZ_CP011025.1 | Pseudoalteromonas arctica A 37-1-2 |
| 108 | 4222846 | 4223058 | + | NZ_CP019628.1 | Pseudoalteromonas aliena |
| 109 | 1398567 | 1398779 | - | NZ_CP011041.1 | Pseudoalteromonas tetraodonis |
| 110 | 1345282 | 1345494 | - | NZ_CP011030.1 | Pseudoalteromonas issachenkonii |
| 111 | 684052 | 684273 | - | NZ_CP030753.1 | Actinobacillus pleuropneumoniae |
| 112 | 2039378 | 2039590 | + | NZ_CP032090.1 | Pseudoalteromonas donghaensis |
| 113 | 2889627 | 2889854 | + | NZ_CP050150.1 | Hafnia alvei |
| 114 | 1908446 | 1908658 | + | NC_007481.1 | Pseudoalteromonas translucida |
| 115 | 2184436 | 2184648 | + | NZ_CP011036.1 | Pseudoalteromonas nigrifaciens |
| 116 | 2155943 | 2156155 | + | NZ_CP027523.1 | Pseudoalteromonas carrageenovora |
| 117 | 1463528 | 1463740 | - | NZ_CP033065.1 | Pseudoalteromonas agarivorans |
| 118 | 2173741 | 2173953 | + | NZ_CP023464.1 | Pseudoalteromonas atlantica |
| 119 | 1517398 | 1517610 | - | NZ_CP011028.1 | Pseudoalteromonas espejiana DSM 9414 |
| 120 | 1106125 | 1106349 | + | NZ_CP016180.1 | Pasteurella skyensis |
| 121 | 2776438 | 2776665 | + | NC_012880.1 | Musicola paradisiaca Ech703 |
| 122 | 1510341 | 1510562 | + | NZ_LT906448.1 | Pasteurella dagmatis |
| 123 | 1598965 | 1599189 | - | NZ_CP016604.1 | Otariodibacter oris |
| 124 | 3458370 | 3458591 | + | NZ_CP028897.1 | Dongshaea marina |
| 125 | 1570756 | 1570980 | - | NZ_CP029206.1 | Actinobacillus porcitonsillarum |
| 126 | 2328660 | 2328887 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 127 | 323130 | 323357 | + | NZ_CP053416.1 | Salmonella bongori |
| 128 | 3908992 | 3909204 | + | NZ_CP072425.1 | Pseudoalteromonas viridis |
| 129 | 454175 | 454387 | + | NZ_CP072133.1 | Pseudoalteromonas xiamenensis |
| 130 | 2273836 | 2274054 | - | NZ_CP014056.2 | Grimontia hollisae |
| 131 | 1795851 | 1796078 | - | NC_014541.1 | Ferrimonas balearica DSM 9799 |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP050851.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF11893.10 | 0.99 | 129 | 20.0 | same-strand | Domain of unknown function (DUF3413) |
| 2 | PF00884.25 | 0.71 | 92 | 20 | same-strand | Sulfatase |
| 3 | PF04245.15 | 0.9 | 117 | 135.0 | opposite-strand | 37-kD nucleoid-associated bacterial protein |
++ More..