* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000964.3
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00583.27
|
0.83
|
5
|
3936
|
opposite-strand
|
Acetyltransferase (GNAT) family
|
2
|
PF08863.12
|
0.83
|
5
|
3410
|
opposite-strand
|
YolD-like protein
|
3
|
PF00817.22
|
1.0
|
6
|
2176.5
|
opposite-strand
|
impB/mucB/samB family
|
4
|
PF11799.10
|
1.0
|
6
|
2176.5
|
opposite-strand
|
impB/mucB/samB family C-terminal domain
|
5
|
PF14164.8
|
1.0
|
6
|
1803.5
|
same-strand
|
YqzH-like protein
|
6
|
PF00903.27
|
0.83
|
5
|
-3
|
opposite-strand
|
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
|
7
|
PF13669.8
|
0.83
|
5
|
-3
|
opposite-strand
|
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
|
8
|
PF00291.27
|
1.0
|
6
|
1434.5
|
opposite-strand
|
Pyridoxal-phosphate dependent enzyme
|
9
|
PF00106.27
|
1.0
|
6
|
2828.5
|
opposite-strand
|
short chain dehydrogenase
|
10
|
PF13561.8
|
0.67
|
4
|
2858.0
|
opposite-strand
|
Enoyl-(Acyl carrier protein) reductase
|
11
|
PF08659.12
|
1.0
|
6
|
2828.5
|
opposite-strand
|
KR domain
|
12
|
PF00753.29
|
1.0
|
6
|
3612.0
|
opposite-strand
|
Metallo-beta-lactamase superfamily
|
++ More..