Result : P52134

Protein Information

• Protein name: Uncharacterized protein YpjK
• NCBI Accession ID: U00096.3
• Organism: Escherichia coli (strain K12)
• Left: 2770445
• Right: 2770681
• Strand: +
• Nucleotide Sequence: GTGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTGCAACCGTTGCCGCACTACTGACGGGAGGTGGTGCAGCCGGTGCTGCCAGTGTCGCGCTGACGCCGTTCGTCGGCGTGCCGGTGGGTATTTTTGTGGGAATTTATGTCTTTGCCAAAGTGGTTCGTCTGATTTCAGGGAAAAAATAA
• Sequence: MPVIAIIAIVIIVIILNKTGVSDSLTALTLATVAALLTGGGAAGAASVALTPFVGVPVGIFVGIYVFAKVVRLISGKK
• Source of smORF: Swiss-Prot
• Pubmed ID: 9278503 16738553
• Functional Category: Others
• Uniprot ID: P52134
• ORF Length (Amino Acid): 78

Conservation Analysis

No. of Species: 6

Sr.No.	Left Position	Right Position	Strand	NCBI Accession id	Species Name
1	2730152	2730388	-	NZ_CP023529.1	Lelliottia amnigena
2	605687	605923	+	NZ_CP032487.1	Yersinia hibernica
3	1137605	1137841	-	NZ_CP043318.1	Enterobacter chengduensis
4	2770445	2770681	+	NC_000913.3	Escherichia coli str. K-12 substr. MG1655
5	519984	520217	+	NZ_CP038498.1	Pectobacterium punjabense
6	2628117	2628350	+	NZ_CP015749.1	Pectobacterium parmentieri

Neighborhood Conservation Analysis

^* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
^* 'Small ORF' represents the entry/query analyzed.
^* Image generated using 'gggenes'(R-Package).

Neighborhood Representative Chosen(Species): NZ_CP043318.1

Sr.No.	Domain	Co-occurrence Frequency	No. of species in which domain occurs with smORF	Median distance b/w smORF and domain bearing ORFs	Orientation relative to smORF	PFAM Information
1	PF06067.13	0.67	4	960.0	same-strand	Domain of unknown function (DUF932)
2	PF01926.25	1.0	6	1875.0	same-strand	50S ribosome-binding GTPase
3	PF04002.17	0.67	4	949.5	same-strand	RadC-like JAB domain