ProsmORF-pred
Result : P50727
Protein Information
Information Type Description
Protein name Ferredoxin
NCBI Accession ID L47648.1
Organism Bacillus subtilis (strain 168)
Left 2726
Right 2974
Strand -
Nucleotide Sequence ATGGCAAAGTACACAATCGTAGACAAAGATACATGTATTGCATGCGGCGCTTGCGGAGCTGCTGCACCAGACATTTACGATTACGATGATGAAGGCATCGCGTTCGTAACGCTTGATGAAAACAAAGGTGTTGTCGAAGTTCCTGAGGTACTGGAAGAAGATATGATTGACGCATTTGAAGGATGCCCTACTGATTCCATCAAAGTGGCGGATGAGCCATTTGAAGGCGACCCGCTTAAATTTGAATAG
Sequence MAKYTIVDKDTCIACGACGAAAPDIYDYDDEGIAFVTLDENKGVVEVPEVLEEDMIDAFEGCPTDSIKVADEPFEGDPLKFE
Source of smORF Swiss-Prot
Function Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin may act as a phosphodonor to cytochrome P450 BioI. {ECO:0000269|Pubmed:12538057}.
Pubmed ID 8760912 9384377 12538057
Domain CDD:418523
Functional Category Metal-binding
Uniprot ID P50727
ORF Length (Amino Acid) 82
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Conservation Analysis
Conservation Analysis
No. of Species: 176
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 2370096 2370344 + NZ_CP033052.1 Bacillus vallismortis
2 2281918 2282166 + NZ_CP048852.1 Bacillus tequilensis
3 2207678 2207926 + NZ_CP051464.1 Bacillus mojavensis
4 2279064 2279312 + NZ_CP034943.1 Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499
5 2218920 2219168 + NZ_CP013984.1 Bacillus inaquosorum
6 3846626 3846874 - NZ_CP029364.1 Bacillus halotolerans
7 2409729 2409977 + NC_000964.3 Bacillus subtilis subsp. subtilis str. 168
8 1705867 1706115 - NZ_CP011937.1 Bacillus velezensis
9 2293839 2294087 + NZ_CP053376.1 Bacillus amyloliquefaciens
10 4269127 4269375 - NZ_CP068053.1 Peribacillus psychrosaccharolyticus
11 630564 630812 + NZ_CP009709.1 Weizmannia coagulans DSM 1 = ATCC 7050
12 3046038 3046292 - NZ_CP022315.1 Virgibacillus phasianinus
13 3823175 3823411 - NZ_CP022315.1 Virgibacillus phasianinus
14 2381080 2381328 + NC_006270.3 Bacillus licheniformis DSM 13 = ATCC 14580
15 2483249 2483497 + NZ_CP023665.1 Bacillus paralicheniformis
16 2778700 2778948 + NZ_CP018866.1 Sutcliffiella cohnii
17 3271495 3271743 - NZ_CP017786.1 Bacillus xiamenensis
18 3180358 3180606 - NZ_CP043404.1 Bacillus safensis
19 2604872 2605120 + NZ_LT603683.1 Bacillus glycinifermentans
20 966862 967113 + NZ_CP013862.1 Lentibacillus amyloliquefaciens
21 2108172 2108420 + NZ_CP011150.1 Bacillus altitudinis
22 1793205 1793456 - NZ_CP065425.1 Heyndrickxia vini
23 3152062 3152310 + NC_022524.1 Bacillus infantis NRRL B-14911
24 1312876 1313124 - NZ_CP024109.1 Bacillus cytotoxicus
25 1423689 1423937 - NC_007530.2 Bacillus anthracis str. 'Ames Ancestor'
26 1422319 1422567 - NZ_CP064875.1 Bacillus toyonensis
27 1472451 1472699 - NC_011725.1 Bacillus cereus B4264
28 1550057 1550305 - NZ_CP016020.1 Bacillus weihaiensis
29 1439937 1440185 - NZ_CP032365.1 Bacillus wiedmannii
30 3662752 3663000 + NZ_CP040336.1 Bacillus luti
31 3216167 3216415 + NZ_CP053989.1 Niallia circulans
32 4683183 4683419 - NZ_CP053989.1 Niallia circulans
33 2094661 2094909 + NZ_CP012024.1 Bacillus smithii
34 3595538 3595786 + NZ_CP017703.1 Aeribacillus pallidus
35 3182370 3182618 + NZ_CP042593.1 Bacillus dafuensis
36 2281443 2281700 + NZ_CP015108.1 Sporosarcina ureae
37 3204461 3204718 - NZ_CP015108.1 Sporosarcina ureae
38 1090678 1090947 - NZ_CP015108.1 Sporosarcina ureae
39 1728538 1728777 - NZ_CP015108.1 Sporosarcina ureae
40 1873191 1873439 + NZ_CP009416.1 Jeotgalibacillus malaysiensis
41 3598633 3598881 - NZ_CP041305.1 Cytobacillus ciccensis
42 3676164 3676412 - NZ_CP022983.1 Cytobacillus kochii
43 1167639 1167884 + NZ_CP022983.1 Cytobacillus kochii
44 1743164 1743412 + NZ_CP012152.1 Anoxybacillus gonensis
45 2358900 2359148 + NZ_CP015438.1 Anoxybacillus amylolyticus
46 1867366 1867614 + NZ_CP064060.1 Anoxybacillus caldiproteolyticus
47 231176 231424 - NZ_CP017704.1 Peribacillus simplex NBRC 15720 = DSM 1321
48 4624392 4624640 - NZ_CP017704.1 Peribacillus simplex NBRC 15720 = DSM 1321
49 3789357 3789587 + NZ_CP017704.1 Peribacillus simplex NBRC 15720 = DSM 1321
50 1768274 1768522 - NZ_CP017704.1 Peribacillus simplex NBRC 15720 = DSM 1321
51 1443962 1444210 - NC_013791.2 Alkalihalobacillus pseudofirmus OF4
52 1549587 1549835 - NZ_CP006837.1 Lysinibacillus varians
53 3132929 3133177 + NZ_CP019980.1 Lysinibacillus sphaericus
54 1883898 1884146 - NZ_LS483476.1 Lederbergia lentus
55 528404 528652 + NZ_CP030926.1 Peribacillus butanolivorans
56 5065112 5065381 + NZ_CP030926.1 Peribacillus butanolivorans
57 1344501 1344731 - NZ_CP030926.1 Peribacillus butanolivorans
58 3331431 3331679 + NZ_CP030926.1 Peribacillus butanolivorans
59 3602758 3602997 + NZ_CP030926.1 Peribacillus butanolivorans
60 1843017 1843268 + NZ_CP016539.2 Planococcus plakortidis
61 2570752 2571000 + NZ_CP015378.1 Fictibacillus phosphorivorans
62 4138444 4138692 + NZ_CP024035.1 Priestia aryabhattai
63 880982 881227 + NZ_CP024035.1 Priestia aryabhattai
64 2329435 2329683 + NZ_CP024035.1 Priestia aryabhattai
65 1619293 1619544 + NZ_CP013659.2 Planococcus rifietoensis
66 2126695 2126943 - NZ_CP020772.1 Halobacillus mangrovi
67 2354107 2354355 + NZ_CP023704.1 Caldibacillus thermoamylovorans
68 3354997 3355245 + NZ_CP010820.1 Lysinibacillus fusiformis
69 1681737 1681985 - NC_002570.2 Alkalihalobacillus halodurans C-125
70 2473475 2473723 - NC_002570.2 Alkalihalobacillus halodurans C-125
71 225823 226071 - NC_002570.2 Alkalihalobacillus halodurans C-125
72 1777571 1777819 + NC_010556.1 Exiguobacterium sibiricum 255-15
73 2281052 2281306 - NZ_CP022437.1 Virgibacillus necropolis
74 1894122 1894370 + NZ_CP041666.1 Radiobacillus deserti
75 1988069 1988320 + NZ_CP016543.2 Planococcus donghaensis
76 2042603 2042854 + NZ_CP016537.2 Planococcus halocryophilus
77 3128999 3129250 - NZ_CP013661.2 Planococcus kocurii
78 2255702 2255953 + NZ_CP016534.2 Planococcus antarcticus DSM 14505
79 186533 186742 - NZ_CP035485.1 Salicibibacter halophilus
80 1983788 1984039 + NZ_CP016540.2 Planococcus versutus
81 2083035 2083286 + NZ_CP019401.1 Planococcus faecalis
82 1865454 1865705 + NZ_CP016538.2 Planococcus maritimus
83 1871223 1871474 + NZ_CP059540.1 Planococcus maritimus
84 1649883 1650131 - NZ_CP031223.1 Psychrobacillus glaciei
85 1638448 1638696 - NZ_CP070511.1 Parageobacillus toebii
86 931018 931260 - NZ_CP070511.1 Parageobacillus toebii
87 2281692 2281940 + NC_006510.1 Geobacillus kaustophilus HTA426
88 1669908 1670156 - NZ_CP018058.1 Geobacillus thermocatenulatus
89 3681167 3681415 - NZ_CP061472.1 Geobacillus thermoleovorans
90 3452 3700 - NZ_CP061472.1 Geobacillus thermoleovorans
91 1411713 1411937 + NZ_CP054482.1 Macrococcus bohemicus
92 3228381 3228629 + NZ_CP016622.1 Parageobacillus thermoglucosidasius
93 427446 427670 - NZ_CP065729.1 Macrococcus caseolyticus
94 1269685 1269909 + NZ_CP047361.1 Macrococcus canis
95 974066 974314 - NZ_CP014342.1 Geobacillus subterraneus
96 1493868 1494116 + NZ_CP061470.1 Geobacillus zalihae
97 1914433 1914681 + NZ_CP038015.1 Paenisporosarcina antarctica
98 1645856 1646095 - NZ_CP038015.1 Paenisporosarcina antarctica
99 1328968 1329216 - NZ_LR134242.1 Staphylococcus warneri
100 99635 99883 + NC_022737.1 Staphylococcus pasteuri SP1
101 1843579 1843827 - NZ_CP017962.1 Virgibacillus halodenitrificans
102 5076290 5076529 + NZ_CP016809.1 Paenibacillus ihbetae
103 832986 833234 + NZ_CP007601.1 Staphylococcus capitis subsp. capitis
104 1431188 1431436 - NZ_AP018587.1 Staphylococcus caprae
105 1493111 1493359 + NZ_LT906460.1 Staphylococcus simiae
106 1369722 1369970 - NZ_CP035288.1 Staphylococcus epidermidis
107 1513264 1513512 - NZ_CP018776.1 Staphylococcus condimenti
108 2103845 2104096 + NZ_CP029797.1 Paraliobacillus zengyii
109 1158333 1158581 + NZ_CP013911.1 Staphylococcus haemolyticus
110 2071480 2071728 - NZ_CP033732.1 Staphylococcus hominis
111 298439 298687 - NZ_CP014022.1 Staphylococcus lugdunensis
112 1238650 1238898 - NZ_LT906462.1 Mammaliicoccus stepanovicii
113 1008676 1008924 + NZ_CP068061.1 Mammaliicoccus vitulinus
114 1147800 1148048 - NZ_CP022046.2 Mammaliicoccus sciuri
115 1970665 1970913 + NZ_CP066042.1 Staphylococcus saccharolyticus
116 1583056 1583304 + NZ_CP033460.1 Staphylococcus debuckii
117 1394203 1394451 - NZ_CP011102.1 Listeria weihenstephanensis
118 1561816 1562064 + NZ_LR134304.1 Staphylococcus schweitzeri
119 1457731 1457979 + NC_007795.1 Staphylococcus aureus subsp. aureus NCTC 8325
120 4988203 4988451 + NZ_CP063356.1 Anaerobacillus isosaccharinicus
121 1512206 1512454 - NZ_CP012502.1 Bacillus beveridgei
122 1526043 1526291 + NZ_CP040676.1 Exiguobacterium mexicanum
123 285386 285652 - NZ_CP031092.1 Salicibibacter kimchii
124 1380816 1381064 - NZ_CP064056.1 Staphylococcus lloydii
125 1213592 1213840 - NZ_CP065712.1 Staphylococcus auricularis
126 609712 609960 - NZ_CP018199.1 Staphylococcus succinus
127 1417412 1417660 - NZ_CP008724.1 Staphylococcus xylosus
128 1110924 1111172 + NZ_CP045927.1 Staphylococcus agnetis
129 2823905 2824156 + NZ_CP014616.1 Sporosarcina psychrophila
130 2301834 2302082 + NC_017668.1 Halobacillus halophilus DSM 2266
131 4200881 4201123 - NZ_CP034248.1 Paenibacillus lentus
132 1802981 1803217 - NZ_CP035492.1 Paenibacillus protaetiae
133 2193031 2193264 + NC_017672.3 Paenibacillus mucilaginosus K02
134 2346864 2347106 + NZ_CP009286.1 Paenibacillus stellifer
135 2413711 2413944 + NZ_CP009286.1 Paenibacillus stellifer
136 1376750 1376998 + NZ_CP013114.1 Staphylococcus equorum
137 1257829 1258077 + NC_014925.1 Staphylococcus pseudintermedius HKU10-03
138 644073 644309 + NZ_CP013652.1 Paenibacillus naphthalenovorans
139 432073 432321 + NZ_CP022096.2 Staphylococcus pettenkoferi
140 1771139 1771396 + NZ_AP021853.1 Sporolactobacillus terrae
141 893425 893673 - NZ_AP021853.1 Sporolactobacillus terrae
142 378750 378986 - NZ_AP021853.1 Sporolactobacillus terrae
143 1936321 1936569 + NZ_CP027770.1 Staphylococcus felis
144 4488535 4488777 + NZ_CP041217.1 Saccharibacillus brassicae
145 1335304 1335552 - NZ_LR134089.1 Staphylococcus saprophyticus
146 1627403 1627651 + NZ_CP008876.1 Terribacillus goriensis
147 2474898 2475146 + NZ_CP020773.1 Staphylococcus lutrae
148 1445583 1445831 - NZ_CP008747.1 Staphylococcus hyicus
149 1174434 1174682 - NZ_LT906464.1 Staphylococcus muscae
150 1162128 1162361 + NZ_CP019659.1 Paenibacillus larvae subsp. larvae
151 1511407 1511643 + NC_019897.1 Thermobacillus composti KWC4
152 4359253 4359495 - NZ_CP034346.1 Paenibacillus lutimineralis
153 5941644 5941886 + NZ_CP054614.1 Paenibacillus barcinonensis
154 2592315 2592557 + NZ_CP043611.1 Paenibacillus antarcticus
155 883771 884013 + NZ_CP014167.1 Paenibacillus yonginensis
156 2087696 2087944 - NZ_CP038012.1 Sporosarcina pasteurii
157 1552560 1552811 + NZ_CP038012.1 Sporosarcina pasteurii
158 924451 924702 + NZ_CP038012.1 Sporosarcina pasteurii
159 2387153 2387389 + NZ_CP009288.1 Paenibacillus durus
160 2659521 2659754 + NZ_CP009288.1 Paenibacillus durus
161 2192551 2192787 + NZ_CP026520.1 Paenibacillus chitinolyticus
162 4220975 4221217 + NZ_CP045298.1 Paenibacillus brasilensis
163 3661789 3662031 - NZ_CP020028.1 Paenibacillus kribbensis
164 2183733 2183975 + NZ_CP004078.1 Paenibacillus sabinae T27
165 2258507 2258740 + NZ_CP004078.1 Paenibacillus sabinae T27
166 2472223 2472465 + NZ_CP013023.1 Paenibacillus bovis
167 2427719 2427955 - NZ_CP033433.1 Cohnella candidum
168 5477564 5477806 + NZ_CP045295.1 Paenibacillus cellulositrophicus
169 3470800 3471033 - NZ_CP045293.1 Paenibacillus guangzhouensis
170 73983 74219 - NZ_CP011058.1 Paenibacillus beijingensis
171 1262460 1262687 - NC_018704.1 Amphibacillus xylanus NBRC 15112
172 3656227 3656469 + NC_016641.1 Paenibacillus terrae HPL-003
173 4895198 4895440 - NZ_CP034235.1 Paenibacillus psychroresistens
174 2322972 2323208 + NZ_AP019400.1 Cohnella abietis
175 2388765 2389007 + NZ_CP009428.1 Paenibacillus odorifer
176 6252386 6252622 + NZ_CP048286.1 Paenibacillus rhizovicinus
177 4754592 4754834 + NZ_CP048429.1 Paenibacillus jilunlii
178 2819846 2820088 + NZ_CP009287.1 Paenibacillus graminis
179 4914769 4915011 + NZ_CP068595.1 Paenibacillus sonchi
180 3121161 3121403 + NZ_LN831776.1 Paenibacillus riograndensis SBR5
181 769931 770167 + NZ_AP019308.1 Paenibacillus baekrokdamisoli
182 4480347 4480583 - NZ_CP048209.1 Paenibacillus lycopersici
183 3045846 3046088 + NZ_CP009285.1 Paenibacillus borealis
184 1215904 1216152 - NZ_CP011361.2 Salimicrobium jeotgali
185 1805816 1806058 + NZ_CP021780.1 Paenibacillus donghaensis
186 4556709 4556951 - NZ_CP011388.1 Paenibacillus swuensis
187 5017189 5017425 - NZ_CP034437.1 Paenibacillus albus
188 1982924 1983172 + NZ_CP023643.1 Brochothrix thermosphacta
189 2016225 2016473 - NC_014829.1 Evansella cellulosilytica DSM 2522
190 1998658 1998882 + NZ_LT906444.1 Listeria welshimeri
191 2990910 2991143 + NZ_CP053187.1 Turicibacter sanguinis
192 900427 900660 - NZ_LR134483.1 Listeria grayi
193 2309968 2310219 + NZ_CP017560.1 Sporosarcina ureilytica
194 2019420 2019644 + NC_003210.1 Listeria monocytogenes EGD-e
195 1470108 1470332 - NZ_CP011366.1 Salinicoccus halodurans
196 744754 744978 - NZ_CP019573.1 Abyssicoccus albus
197 1983637 1983861 + NC_013891.1 Listeria seeligeri serovar 1/2b str. SLCC3954
198 2078839 2079063 + NZ_CP009577.1 Listeria ivanovii subsp. ivanovii
199 3596501 3596725 - NZ_CP018622.1 Virgibacillus dokdonensis
200 2116870 2117115 + NZ_CP024848.1 Oceanobacillus zhaokaii
201 1522442 1522654 - NZ_CP048104.1 Kroppenstedtia pulmonis
202 4892351 4892566 - NZ_CP021434.1 Tumebacillus avium
203 1640895 1641110 + NZ_CP022657.1 Tumebacillus algifaecis
204 780722 780925 + NZ_CP024955.1 Kyrpidia spormannii
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_CP033052.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF01476.22 0.65 114 2723 opposite-strand LysM domain
2 PF00270.31 0.72 127 1193.5 opposite-strand DEAD/DEAH box helicase
3 PF00271.33 0.73 129 1197.0 opposite-strand Helicase conserved C-terminal domain
4 PF04851.17 0.68 119 1172.0 opposite-strand Type III restriction enzyme, res subunit
5 PF14493.8 0.73 129 155.0 opposite-strand Helix-turn-helix domain
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