Result : P45026
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein HI_1082 |
| NCBI Accession ID | L42023.1 |
| Organism | Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) |
| Left | 1149047 |
| Right | 1149304 |
| Strand | - |
| Nucleotide Sequence | ATGGAACTTCAAAAAATTGAACAAATTTTAAAAGACACACTAAATATTGCAGAAGTCTATGCACAAGGTGAAAATGCACATTTTGGTGTGATTGTTGTGAGTGATGAAATCGCTGCACTATCTCGTGTAAAACAACAACAAACGATTTATGCCCCTTTAATGCCTTATTTTAGTACTGGTGAAATTCACGCTCTAACCATCAAAACTTATACCGTAGAAAAATGGAAACGCGATCGTGCATTAAACCAGTTTAATTAA |
| Sequence | MELQKIEQILKDTLNIAEVYAQGENAHFGVIVVSDEIAALSRVKQQQTIYAPLMPYFSTGEIHALTIKTYTVEKWKRDRALNQFN |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl00386. Profile Description: BolA-like protein. transcriptional regulator BolA; Provisional |
| Pubmed ID | 7542800 10675023 |
| Domain | CDD:412350 |
| Functional Category | Others |
| Uniprot ID | P45026 |
| ORF Length (Amino Acid) | 85 |
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| Conservation Analysis |
No. of Species: 94
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1777181 | 1777438 | + | NZ_CP009610.1 | Haemophilus influenzae |
| 2 | 1138281 | 1138538 | - | NZ_LS483429.1 | Haemophilus aegyptius |
| 3 | 32125 | 32382 | - | NZ_LS483458.1 | Haemophilus haemolyticus |
| 4 | 800954 | 801211 | - | NZ_CP040863.1 | Rodentibacter heylii |
| 5 | 1111071 | 1111331 | + | NZ_LT906463.1 | Haemophilus pittmaniae |
| 6 | 1938852 | 1939109 | - | NZ_LR134167.1 | Avibacterium volantium |
| 7 | 837518 | 837769 | + | NZ_CP018804.1 | Histophilus somni |
| 8 | 1512370 | 1512627 | - | NZ_CP016605.1 | Bisgaardia hudsonensis |
| 9 | 1312671 | 1312928 | - | NZ_CP015031.1 | Basfia succiniciproducens |
| 10 | 1700168 | 1700425 | - | NC_006300.1 | [Mannheimia] succiniciproducens MBEL55E |
| 11 | 1586541 | 1586798 | + | NZ_CP028926.1 | Pasteurella multocida |
| 12 | 1244486 | 1244743 | - | NZ_LT906448.1 | Pasteurella dagmatis |
| 13 | 1365158 | 1365412 | + | NZ_LR134510.1 | Actinobacillus delphinicola |
| 14 | 2253499 | 2253756 | + | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
| 15 | 916378 | 916635 | - | NZ_LS483443.1 | Aggregatibacter segnis ATCC 33393 |
| 16 | 902562 | 902822 | + | NZ_CP046531.1 | Mannheimia ovis |
| 17 | 1003440 | 1003700 | + | NZ_CP055305.1 | Mannheimia pernigra |
| 18 | 916949 | 917209 | + | NZ_CP061280.1 | Mannheimia bovis |
| 19 | 387590 | 387847 | + | NZ_CP016604.1 | Otariodibacter oris |
| 20 | 566667 | 566927 | + | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
| 21 | 753501 | 753758 | - | NC_011852.1 | Glaesserella parasuis SH0165 |
| 22 | 1512480 | 1512740 | - | NZ_CP030753.1 | Actinobacillus pleuropneumoniae |
| 23 | 518141 | 518401 | + | NZ_CP006944.1 | Mannheimia varigena USDA-ARS-USMARC-1312 |
| 24 | 49861 | 50121 | + | NZ_CP007715.1 | Actinobacillus equuli subsp. equuli |
| 25 | 62922 | 63182 | + | NZ_CP009159.1 | Actinobacillus suis ATCC 33415 |
| 26 | 1529703 | 1529960 | - | NZ_CP016180.1 | Pasteurella skyensis |
| 27 | 86467 | 86727 | - | NZ_CP029206.1 | Actinobacillus porcitonsillarum |
| 28 | 629182 | 629442 | + | NZ_CP015425.1 | [Haemophilus] ducreyi |
| 29 | 2029059 | 2029316 | - | NZ_CP015029.1 | Frederiksenia canicola |
| 30 | 1421227 | 1421481 | + | NZ_CP023009.1 | Lonsdalea britannica |
| 31 | 3522149 | 3522403 | - | NZ_CP065534.1 | Lonsdalea populi |
| 32 | 4218053 | 4218307 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 33 | 4272685 | 4272939 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 34 | 4721578 | 4721832 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 35 | 523899 | 524153 | + | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 36 | 3043880 | 3044134 | + | NZ_CP011104.1 | Photorhabdus thracensis |
| 37 | 721055 | 721312 | + | NZ_CP046670.1 | Alteromonas mediterranea |
| 38 | 3966121 | 3966372 | - | NZ_CP022358.1 | Shewanella bicestrii |
| 39 | 2114147 | 2114401 | + | NZ_CP026364.1 | Proteus hauseri |
| 40 | 3994738 | 3994992 | + | NC_010554.1 | Proteus mirabilis HI4320 |
| 41 | 1567277 | 1567531 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 42 | 3255712 | 3255966 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 43 | 4439035 | 4439289 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 44 | 573287 | 573541 | + | NZ_CP026377.1 | Mixta gaviniae |
| 45 | 4614344 | 4614598 | - | NZ_LT906479.1 | Serratia ficaria |
| 46 | 498522 | 498776 | + | NZ_CP061511.1 | Mixta calida |
| 47 | 943888 | 944142 | - | NZ_CP065640.1 | Serratia rubidaea |
| 48 | 4818927 | 4819181 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 49 | 872418 | 872675 | + | NC_016901.1 | Shewanella baltica OS678 |
| 50 | 4761480 | 4761734 | - | NZ_LR134494.1 | Serratia quinivorans |
| 51 | 3214511 | 3214765 | - | NC_012691.1 | Tolumonas auensis DSM 9187 |
| 52 | 3586382 | 3586636 | - | NZ_CP023567.1 | Erwinia pyrifoliae |
| 53 | 3869408 | 3869662 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 54 | 4652100 | 4652354 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 55 | 515170 | 515424 | + | NZ_LN907827.1 | Erwinia gerundensis |
| 56 | 1092874 | 1093128 | - | NZ_CP019706.1 | Pantoea alhagi |
| 57 | 726558 | 726815 | + | NZ_CP031769.1 | Salinimonas sediminis |
| 58 | 384881 | 385135 | + | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 59 | 385051 | 385305 | + | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 60 | 4334379 | 4334633 | + | NZ_CP028271.1 | Mixta intestinalis |
| 61 | 349194 | 349448 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 62 | 3101886 | 3102140 | - | NZ_LS483470.1 | Leminorella richardii |
| 63 | 3623479 | 3623733 | - | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 64 | 1255751 | 1256005 | - | NZ_CP047495.1 | Pectobacterium brasiliense |
| 65 | 4493514 | 4493768 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 66 | 4585222 | 4585476 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 67 | 351770 | 352024 | + | NZ_CP034938.1 | Pectobacterium odoriferum |
| 68 | 537678 | 537932 | + | NZ_CP071320.1 | Serratia ureilytica |
| 69 | 4883643 | 4883897 | + | NC_013716.1 | Citrobacter rodentium ICC168 |
| 70 | 3203845 | 3204099 | - | NZ_CP029185.2 | Limnobaculum parvum |
| 71 | 4709464 | 4709718 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 72 | 398217 | 398471 | + | NZ_LT615367.1 | Dickeya aquatica |
| 73 | 331936 | 332190 | + | NZ_CP023525.1 | Cedecea neteri |
| 74 | 335170 | 335424 | + | NZ_LR134201.1 | Cedecea lapagei |
| 75 | 4233099 | 4233353 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 76 | 530698 | 530952 | + | NZ_CP050508.1 | Raoultella terrigena |
| 77 | 335832 | 336086 | - | NZ_CP020388.1 | Pluralibacter gergoviae |
| 78 | 3654977 | 3655231 | - | NZ_CP048796.1 | Providencia vermicola |
| 79 | 3798114 | 3798368 | + | NZ_CP016176.1 | Xenorhabdus hominickii |
| 80 | 2509630 | 2509884 | + | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 81 | 341000 | 341254 | + | NZ_CP031560.1 | Dickeya dianthicola |
| 82 | 350484 | 350738 | + | NC_014500.1 | Dickeya dadantii 3937 |
| 83 | 4051158 | 4051412 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 84 | 4493835 | 4494089 | - | NC_014306.1 | Erwinia billingiae Eb661 |
| 85 | 498722 | 498976 | + | NZ_AP023184.1 | Buttiauxella agrestis |
| 86 | 1132910 | 1133164 | - | NZ_CP023706.1 | Edwardsiella tarda |
| 87 | 3712255 | 3712509 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 88 | 1757975 | 1758229 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 89 | 3159189 | 3159443 | - | NZ_CP016043.1 | Edwardsiella hoshinae |
| 90 | 2637725 | 2637979 | - | NZ_AP019651.1 | Vibrio taketomensis |
| 91 | 20807 | 21061 | + | NZ_AP019657.1 | Vibrio ponticus |
| 92 | 2284584 | 2284838 | + | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 93 | 398515 | 398769 | + | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 94 | 3821837 | 3822091 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LS483458.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00005.29 | 0.99 | 93 | 2427.0 | same-strand | ABC transporter |
| 2 | PF02405.18 | 1.0 | 94 | 1638.0 | same-strand | Permease MlaE |
| 3 | PF02470.22 | 1.0 | 94 | 1083.5 | same-strand | MlaD protein |
| 4 | PF05494.14 | 1.0 | 94 | 427.5 | same-strand | MlaC protein |
| 5 | PF00275.22 | 1.0 | 94 | 55.5 | same-strand | EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) |
| 6 | PF13466.8 | 0.96 | 90 | 133.0 | same-strand | STAS domain |
++ More..