Result : A5EXX2
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 30S ribosomal protein S20 |
| NCBI Accession ID | CP000513.1 |
| Organism | Dichelobacter nodosus (strain VCS1703A) |
| Left | 1061089 |
| Right | 1061355 |
| Strand | + |
| Nucleotide Sequence | TTGGCAAATACAGCACAGGCACTCAAACGAATCAGACAAACAAATAAAGCGCGCGCCCAAAACGCAAGCCAACGTTCAACGATTCGCACCGTTATGAAAAAGTTTTTAAAAGCAATTGAAGCGAAAGATATTGCTACCGCAGAACAAGAATTTTCAACTGCGGCAAGTTTATTAGATCGCGCGGCGCAAAAACACATTATTCACAAAAATAAAGCCAGTCGCTTAAAAAGCCGCATGCATGCCAAGAAAAAAGCATTAGTTGCTTAA |
| Sequence | MANTAQALKRIRQTNKARAQNASQRSTIRTVMKKFLKAIEAKDIATAEQEFSTAASLLDRAAQKHIIHKNKASRLKSRMHAKKKALVA |
| Source of smORF | Swiss-Prot |
| Function | Binds directly to 16S ribosomal RNA. {ECO:0000255|HAMAP-Rule:MF_00500}. |
| Pubmed ID | 17468768 |
| Domain | CDD:412349 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | A5EXX2 |
| ORF Length (Amino Acid) | 88 |
++ More..
| Conservation Analysis |
No. of Species: 345
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1282629 | 1282892 | - | NZ_LR134365.1 | Cardiobacterium hominis |
| 2 | 1294810 | 1295076 | - | NC_007912.1 | Saccharophagus degradans 2-40 |
| 3 | 560947 | 561210 | - | NC_012968.1 | Methylotenera mobilis JLW8 |
| 4 | 1791286 | 1791552 | + | NZ_CP064781.1 | Azospira restricta |
| 5 | 822170 | 822433 | + | NZ_LT906434.1 | Neisseria zoodegmatis |
| 6 | 4142364 | 4142627 | + | NC_016112.1 | Methylotuvimicrobium alcaliphilum 20Z |
| 7 | 538704 | 538967 | - | NC_012969.1 | Methylovorus glucosetrophus SIP3-4 |
| 8 | 2392296 | 2392562 | - | NZ_CP022579.1 | Oryzomicrobium terrae |
| 9 | 4274207 | 4274470 | + | NZ_CP035467.1 | Methylotuvimicrobium buryatense |
| 10 | 1033306 | 1033569 | - | NZ_CP031252.1 | Neisseria elongata |
| 11 | 5045984 | 5046250 | + | NZ_CP020038.1 | Agarilytica rhodophyticola |
| 12 | 1270098 | 1270364 | - | NZ_CP045650.1 | Acinetobacter wanghuae |
| 13 | 1513996 | 1514262 | + | NZ_CP065728.1 | Moraxella nonliquefaciens |
| 14 | 2000778 | 2001044 | + | NZ_CP024632.1 | Acinetobacter junii |
| 15 | 1569695 | 1569961 | - | NZ_CP030880.1 | Acinetobacter haemolyticus |
| 16 | 2183581 | 2183847 | - | NZ_CP012808.1 | Acinetobacter equi |
| 17 | 1584102 | 1584368 | + | NZ_CP041970.1 | Acinetobacter dispersus |
| 18 | 2363698 | 2363961 | + | NC_007947.1 | Methylobacillus flagellatus KT |
| 19 | 1273684 | 1273950 | - | NZ_CP030241.1 | Moraxella bovis |
| 20 | 508805 | 509068 | - | NZ_CP046027.1 | Neisseria brasiliensis |
| 21 | 1128681 | 1128947 | + | NZ_CP041335.1 | Chitinolyticbacter meiyuanensis |
| 22 | 1561978 | 1562241 | - | NZ_CP031253.1 | Neisseria lactamica |
| 23 | 1180625 | 1180888 | + | NZ_CP019448.1 | Simonsiella muelleri ATCC 29453 |
| 24 | 752372 | 752635 | + | NZ_AP021881.1 | Sulfuriferula nivalis |
| 25 | 1250782 | 1251045 | - | NZ_LS483369.1 | Neisseria cinerea |
| 26 | 1389445 | 1389708 | - | NZ_CP021520.1 | Neisseria meningitidis |
| 27 | 479502 | 479765 | - | NZ_CP012028.1 | Neisseria gonorrhoeae |
| 28 | 1451128 | 1451391 | + | NZ_CP039887.1 | Neisseria subflava |
| 29 | 45986 | 46249 | - | NZ_CP039886.1 | Neisseria flavescens |
| 30 | 1507473 | 1507736 | + | NZ_CP031699.1 | Neisseria animalis |
| 31 | 1752659 | 1752922 | - | NZ_CP072524.1 | Neisseria sicca |
| 32 | 1142977 | 1143240 | - | NZ_CP059563.1 | Conchiformibius steedae |
| 33 | 2001777 | 2002040 | + | NZ_LR134533.1 | Neisseria weaveri |
| 34 | 352870 | 353133 | + | NZ_CP018632.1 | Granulosicoccus antarcticus IMCC3135 |
| 35 | 1859903 | 1860166 | + | NZ_CP022278.1 | Neisseria chenwenguii |
| 36 | 1060221 | 1060487 | + | NC_014147.1 | Moraxella catarrhalis BBH18 |
| 37 | 2262360 | 2262626 | + | NZ_CP016895.1 | Acinetobacter larvae |
| 38 | 3191131 | 3191397 | - | NZ_AP022853.1 | Sulfurimicrobium lacus |
| 39 | 2014856 | 2015119 | - | NZ_CP031700.1 | Neisseria zalophi |
| 40 | 882402 | 882677 | - | NZ_CP043311.1 | Pseudomonas lalkuanensis |
| 41 | 1877923 | 1878186 | + | NZ_CP059565.1 | Neisseria wadsworthii |
| 42 | 2218220 | 2218483 | + | NC_022357.1 | Sulfuricella denitrificans skB26 |
| 43 | 2345633 | 2345893 | - | NZ_CP021377.1 | Oceanisphaera profunda |
| 44 | 835080 | 835343 | + | NZ_CP059569.1 | Kingella oralis |
| 45 | 922920 | 923195 | - | NZ_AP014862.1 | Pseudomonas furukawaii |
| 46 | 306332 | 306598 | + | NZ_CP040105.1 | Acinetobacter nosocomialis M2 |
| 47 | 2026682 | 2026948 | + | NZ_CP015121.1 | Acinetobacter baumannii |
| 48 | 1724792 | 1725061 | - | NZ_CP071766.1 | Acinetobacter towneri |
| 49 | 1608440 | 1608706 | - | NZ_CP014143.1 | Microbulbifer aggregans |
| 50 | 1355685 | 1355951 | - | NZ_LR134343.1 | Moraxella cuniculi |
| 51 | 1687440 | 1687709 | + | NZ_CP044483.1 | Acinetobacter schindleri |
| 52 | 2052151 | 2052417 | + | NZ_CP035934.2 | Acinetobacter cumulans |
| 53 | 2199208 | 2199471 | - | NZ_LR134313.1 | Neisseria canis |
| 54 | 660501 | 660761 | - | NZ_AP018724.1 | Sulfurivermis fontis |
| 55 | 3674017 | 3674280 | + | NZ_CP041730.1 | Chitinimonas arctica |
| 56 | 2760489 | 2760749 | + | NZ_CP017689.1 | Thalassotalea crassostreae |
| 57 | 1272477 | 1272740 | - | NZ_LR134516.1 | Neisseria animaloris |
| 58 | 2832546 | 2832809 | + | NZ_CP060414.1 | Neisseria musculi |
| 59 | 1396523 | 1396783 | + | NZ_CP034759.1 | Litorilituus sediminis |
| 60 | 2469598 | 2469864 | - | NZ_CP016210.1 | Azoarcus olearius |
| 61 | 1647887 | 1648165 | + | NZ_CP045302.1 | Azotobacter salinestris |
| 62 | 1454711 | 1454974 | + | NZ_CP031325.1 | Neisseria polysaccharea |
| 63 | 3565054 | 3565317 | + | NZ_LT671418.1 | Herminiimonas arsenitoxidans |
| 64 | 2121038 | 2121301 | + | NZ_CP059571.1 | Neisseria bacilliformis |
| 65 | 1125487 | 1125753 | - | NZ_AP014936.1 | Sulfurifustis variabilis |
| 66 | 236418 | 236687 | + | NZ_CP021781.1 | Francisella adeliensis |
| 67 | 1558355 | 1558618 | - | NZ_AP018738.1 | Ferriphaselus amnicola |
| 68 | 5112663 | 5112938 | + | NC_002516.2 | Pseudomonas aeruginosa PAO1 |
| 69 | 3484983 | 3485243 | - | NZ_CP020465.1 | Cognaticolwellia beringensis |
| 70 | 1384664 | 1384933 | - | NC_005966.1 | Acinetobacter baylyi ADP1 |
| 71 | 1038772 | 1039038 | - | NC_016603.1 | Acinetobacter pittii PHEA-2 |
| 72 | 2177740 | 2178006 | + | NZ_CP053391.1 | Acinetobacter lactucae |
| 73 | 2286264 | 2286530 | + | NZ_CP065820.1 | Acinetobacter seifertii |
| 74 | 538637 | 538903 | + | NZ_LR884459.1 | Psychrobacter arenosus |
| 75 | 2077845 | 2078111 | - | NZ_AP022345.1 | Fluviibacter phosphoraccumulans |
| 76 | 352769 | 353041 | - | NC_002971.4 | Coxiella burnetii RSA 493 |
| 77 | 5882879 | 5883145 | + | NZ_CP019038.1 | Massilia putida |
| 78 | 2499550 | 2499813 | + | NZ_HG916765.1 | Castellaniella defragrans 65Phen |
| 79 | 4112192 | 4112467 | + | NC_012560.1 | Azotobacter vinelandii DJ |
| 80 | 2357432 | 2357698 | - | NZ_CP025682.1 | Azoarcus pumilus |
| 81 | 2055426 | 2055689 | - | NZ_CP017707.1 | Chromobacterium vaccinii |
| 82 | 737592 | 737855 | + | NZ_AP019312.1 | Chromobacterium haemolyticum |
| 83 | 1950869 | 1951132 | - | NZ_AP021888.1 | Thiosulfativibrio zosterae |
| 84 | 1699818 | 1700078 | + | NZ_CP021376.1 | Oceanisphaera avium |
| 85 | 156847 | 157113 | + | NZ_CP070518.1 | Acinetobacter calcoaceticus |
| 86 | 5060038 | 5060307 | + | NZ_CP047698.1 | Pseudomonas knackmussii |
| 87 | 6110681 | 6110950 | + | NZ_CP048833.1 | Pseudomonas multiresinivorans |
| 88 | 1098386 | 1098655 | - | NZ_CP014158.1 | Pseudomonas citronellolis |
| 89 | 2054273 | 2054539 | + | NC_007969.1 | Psychrobacter cryohalolentis K5 |
| 90 | 2293442 | 2293708 | + | NC_014259.1 | Acinetobacter oleivorans DR1 |
| 91 | 357854 | 358126 | - | NZ_CP010427.1 | Allofrancisella guangzhouensis |
| 92 | 532942 | 533214 | - | NZ_CP014544.1 | Zhongshania aliphaticivorans |
| 93 | 898732 | 898995 | + | NC_013851.1 | Allochromatium vinosum DSM 180 |
| 94 | 2264508 | 2264771 | - | NZ_AP021889.1 | Thiosulfatimonas sediminis |
| 95 | 1019745 | 1020011 | - | NZ_CP014945.1 | Psychrobacter alimentarius |
| 96 | 5743428 | 5743706 | + | NZ_CP035088.1 | Pseudomonas viciae |
| 97 | 5805019 | 5805297 | + | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 98 | 542444 | 542707 | + | NZ_AP018721.1 | Sulfuritortus calidifontis |
| 99 | 1491954 | 1492217 | + | NZ_AP021884.1 | Sulfuriferula plumbiphila |
| 100 | 336208 | 336474 | - | NZ_CP060084.1 | Teredinibacter haidensis |
| 101 | 5155333 | 5155611 | - | NZ_CP048810.1 | Pseudomonas bijieensis |
| 102 | 812558 | 812824 | + | NZ_CP014646.1 | Thauera humireducens |
| 103 | 865196 | 865462 | + | NZ_CP007446.1 | Snodgrassella alvi wkB2 |
| 104 | 4077167 | 4077433 | + | NZ_CP034464.1 | Undibacterium parvum |
| 105 | 4134012 | 4134290 | + | NZ_CP060009.1 | Pseudomonas sediminis |
| 106 | 3962818 | 3963096 | + | NZ_CP013124.1 | Pseudomonas mendocina S5.2 |
| 107 | 3440475 | 3440753 | - | NZ_CP070505.1 | Pseudomonas toyotomiensis |
| 108 | 1096640 | 1096918 | - | NZ_CP068551.1 | Pseudomonas khazarica |
| 109 | 588131 | 588394 | + | NZ_CP007031.1 | Marichromatium purpuratum 984 |
| 110 | 3127138 | 3127398 | - | NZ_CP013816.1 | Piscirickettsia salmonis |
| 111 | 379371 | 379643 | - | NZ_CP009654.1 | Francisella frigiditurris |
| 112 | 6741204 | 6741470 | + | NZ_CP040017.1 | Massilia umbonata |
| 113 | 1807754 | 1808020 | + | NC_007204.1 | Psychrobacter arcticus 273-4 |
| 114 | 4045505 | 4045768 | - | NC_005085.1 | Chromobacterium violaceum ATCC 12472 |
| 115 | 762260 | 762523 | - | NZ_CP029495.1 | Chromobacterium phragmitis |
| 116 | 2527754 | 2528020 | - | NZ_CP012678.1 | Psychrobacter urativorans |
| 117 | 2283402 | 2283674 | - | NZ_CP014671.1 | Immundisolibacter cernigliae |
| 118 | 4504967 | 4505227 | + | NZ_CP019628.1 | Pseudoalteromonas aliena |
| 119 | 4044862 | 4045137 | + | NZ_LR215729.2 | Pseudomonas marincola |
| 120 | 3450447 | 3450713 | + | NZ_CP019650.1 | Microbulbifer agarilyticus |
| 121 | 2808282 | 2808545 | - | NZ_CP043473.1 | Chromobacterium paludis |
| 122 | 1204810 | 1205070 | - | NC_003910.7 | Colwellia psychrerythraea 34H |
| 123 | 394790 | 395056 | + | NZ_AP018933.1 | Zymobacter palmae |
| 124 | 328065 | 328328 | - | NZ_CP039731.1 | Aquitalea aquatilis |
| 125 | 629588 | 629851 | + | NZ_CP047241.1 | Aquitalea denitrificans |
| 126 | 1654918 | 1655181 | + | NZ_CP059564.1 | Alysiella filiformis |
| 127 | 5592289 | 5592555 | + | NZ_CP046904.1 | Massilia flava |
| 128 | 1273916 | 1274182 | - | NZ_CP031222.1 | Aquirhabdus parva |
| 129 | 4992077 | 4992343 | - | NZ_CP036401.1 | Massilia albidiflava |
| 130 | 664176 | 664439 | + | NZ_CP035033.1 | Hydrogenovibrio thermophilus |
| 131 | 2077057 | 2077323 | + | NZ_CP021323.1 | Kushneria konosiri |
| 132 | 1128288 | 1128554 | - | NZ_CP021358.1 | Kushneria marisflavi |
| 133 | 2671256 | 2671519 | - | NZ_CP015249.1 | Dokdonella koreensis DS-123 |
| 134 | 4958350 | 4958616 | + | NZ_CP048878.1 | Spartinivicinus ruber |
| 135 | 489651 | 489914 | + | NC_018012.1 | Thiocystis violascens DSM 198 |
| 136 | 1069662 | 1069922 | - | NZ_CP011041.1 | Pseudoalteromonas tetraodonis |
| 137 | 1055824 | 1056084 | - | NZ_CP011030.1 | Pseudoalteromonas issachenkonii |
| 138 | 2717131 | 2717397 | + | NZ_CP018839.1 | Thauera chlorobenzoica |
| 139 | 526729 | 526995 | + | NC_007963.1 | Chromohalobacter salexigens DSM 3043 |
| 140 | 3058440 | 3058709 | + | NZ_CP031415.1 | Saccharospirillum mangrovi |
| 141 | 996999 | 997268 | - | NZ_CP011381.2 | Moraxella bovoculi |
| 142 | 2540394 | 2540657 | - | NC_004757.1 | Nitrosomonas europaea ATCC 19718 |
| 143 | 2268944 | 2269210 | + | NZ_CP013189.1 | Pseudohongiella spirulinae |
| 144 | 770356 | 770619 | + | NZ_CP018799.1 | Mariprofundus aestuarium |
| 145 | 2160855 | 2161118 | + | NC_014394.1 | Gallionella capsiferriformans ES-2 |
| 146 | 1480216 | 1480485 | - | NZ_CP029843.1 | Lysobacter maris |
| 147 | 3623246 | 3623509 | - | NZ_CP011451.1 | Nitrosomonas communis |
| 148 | 1345551 | 1345814 | - | NC_020541.1 | Rhodanobacter denitrificans |
| 149 | 943127 | 943387 | - | NC_007481.1 | Pseudoalteromonas translucida |
| 150 | 1007171 | 1007431 | - | NZ_CP011036.1 | Pseudoalteromonas nigrifaciens |
| 151 | 2646932 | 2647192 | + | NZ_CP027523.1 | Pseudoalteromonas carrageenovora |
| 152 | 2803083 | 2803343 | + | NZ_CP011025.1 | Pseudoalteromonas arctica A 37-1-2 |
| 153 | 83572 | 83844 | - | NZ_CP038017.1 | Allofrancisella frigidaquae |
| 154 | 1146846 | 1147121 | - | NZ_AP022642.1 | Pseudomonas otitidis |
| 155 | 1769242 | 1769505 | - | NC_008344.1 | Nitrosomonas eutropha C91 |
| 156 | 566650 | 566910 | - | NZ_CP045350.1 | Vibrio aquimaris |
| 157 | 1746553 | 1746816 | + | NZ_CP070273.1 | Marinomonas foliarum |
| 158 | 3815623 | 3815886 | + | NZ_CP054301.1 | Marinomonas primoryensis |
| 159 | 1163557 | 1163823 | - | NZ_CP022358.1 | Shewanella bicestrii |
| 160 | 2018869 | 2019132 | - | NZ_AP020335.1 | Hydrogenovibrio marinus |
| 161 | 4277641 | 4277907 | - | NZ_HG322949.1 | Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 |
| 162 | 2517607 | 2517867 | + | NZ_CP033065.1 | Pseudoalteromonas agarivorans |
| 163 | 1055442 | 1055702 | - | NZ_CP023464.1 | Pseudoalteromonas atlantica |
| 164 | 2649655 | 2649915 | + | NZ_CP011028.1 | Pseudoalteromonas espejiana DSM 9414 |
| 165 | 1504418 | 1504687 | + | NZ_CP071517.1 | Lysobacter arenosi |
| 166 | 1055312 | 1055581 | - | NZ_CP011158.1 | Moraxella ovis |
| 167 | 2367584 | 2367847 | + | NZ_CP029347.1 | Saliniradius amylolyticus |
| 168 | 4278309 | 4278572 | + | NZ_CP061081.1 | Marinomonas arctica |
| 169 | 1403864 | 1404133 | - | NZ_CP046603.1 | Lysobacter soli |
| 170 | 4078905 | 4079165 | + | NZ_CP072425.1 | Pseudoalteromonas viridis |
| 171 | 2731709 | 2731969 | - | NZ_LR778301.1 | Denitratisoma oestradiolicum |
| 172 | 4361287 | 4361553 | + | NZ_CP060092.1 | Teredinibacter purpureus |
| 173 | 3019357 | 3019623 | + | NC_006513.1 | Aromatoleum aromaticum EbN1 |
| 174 | 7252255 | 7252518 | - | NZ_CP024608.1 | Massilia violaceinigra |
| 175 | 2138370 | 2138639 | - | NZ_CP023465.1 | Lysobacter capsici |
| 176 | 1711375 | 1711641 | - | NZ_CP029331.1 | Thauera hydrothermalis |
| 177 | 639903 | 640166 | - | NZ_CP009238.1 | Basilea psittacipulmonis DSM 24701 |
| 178 | 1790002 | 1790268 | + | NZ_CP028339.1 | Thauera aromatica K172 |
| 179 | 564280 | 564546 | - | NZ_CP059467.1 | Aromatoleum bremense |
| 180 | 2227038 | 2227307 | - | NZ_CP011129.1 | Lysobacter antibioticus |
| 181 | 999323 | 999586 | - | NC_013959.1 | Sideroxydans lithotrophicus ES-1 |
| 182 | 2534619 | 2534882 | - | NZ_CP039268.1 | Thermochromatium tepidum ATCC 43061 |
| 183 | 3921812 | 3922078 | + | NZ_CP059560.1 | Aromatoleum petrolei |
| 184 | 2272083 | 2272349 | + | NZ_CP028324.1 | Massilia armeniaca |
| 185 | 2730849 | 2731115 | + | NZ_CP014782.1 | Shewanella psychrophila |
| 186 | 967861 | 968127 | - | NZ_CP047491.1 | Microbulbifer hydrolyticus |
| 187 | 933961 | 934224 | + | NC_016043.1 | Taylorella asinigenitalis MCE3 |
| 188 | 358356 | 358619 | - | NZ_CP047165.1 | Pelistega ratti |
| 189 | 3947827 | 3948093 | + | NC_011566.1 | Shewanella piezotolerans WP3 |
| 190 | 2138388 | 2138654 | - | NZ_CP018845.1 | Herbaspirillum robiniae |
| 191 | 3618817 | 3619086 | + | NZ_CP011131.1 | Lysobacter gummosus |
| 192 | 2383639 | 2383899 | + | NZ_CP072844.1 | Psychrosphaera aestuarii |
| 193 | 3636351 | 3636614 | + | NC_015559.1 | Marinomonas posidonica IVIA-Po-181 |
| 194 | 1105397 | 1105657 | - | NZ_AP012273.1 | Thiolapillus brandeum |
| 195 | 1935308 | 1935574 | + | NC_018868.3 | Simiduia agarivorans SA1 = DSM 21679 |
| 196 | 162961 | 163227 | + | NZ_LR134418.1 | Legionella adelaidensis |
| 197 | 2088673 | 2088936 | - | NZ_CP059567.1 | Neisseria shayeganii |
| 198 | 2602530 | 2602796 | + | NC_017964.1 | Advenella kashmirensis WT001 |
| 199 | 768323 | 768586 | - | NZ_CP022987.1 | Pusillimonas thiosulfatoxidans |
| 200 | 2480423 | 2480686 | - | NZ_CP038034.1 | Achromobacter insolitus |
| 201 | 3562897 | 3563160 | - | NZ_CP027860.1 | Ahniella affigens |
| 202 | 1130472 | 1130738 | - | NZ_CP023559.1 | Salinicola tamaricis |
| 203 | 1138304 | 1138564 | + | NZ_AP012547.1 | Sulfuritalea hydrogenivorans sk43H |
| 204 | 1968945 | 1969211 | + | NZ_CP023422.1 | Janthinobacterium svalbardensis |
| 205 | 5742260 | 5742526 | + | NZ_CP041185.1 | Janthinobacterium tructae |
| 206 | 1896476 | 1896742 | + | NZ_CP048832.1 | Janthinobacterium lividum |
| 207 | 2808695 | 2808958 | + | NC_010170.1 | Bordetella petrii |
| 208 | 2238589 | 2238852 | - | NZ_CP016172.1 | Bordetella flabilis |
| 209 | 599529 | 599807 | - | NZ_CP026111.1 | Paraburkholderia terrae |
| 210 | 630571 | 630837 | - | NZ_CP014864.1 | Microbulbifer thermotolerans |
| 211 | 4460432 | 4460692 | + | NZ_CP028897.1 | Dongshaea marina |
| 212 | 1925736 | 1926005 | + | NZ_CP032134.1 | Acinetobacter chinensis |
| 213 | 808039 | 808311 | - | NZ_CP021060.1 | Taylorella equigenitalis |
| 214 | 3742110 | 3742373 | + | NZ_CP016171.1 | Bordetella bronchialis |
| 215 | 602428 | 602706 | - | NC_010622.1 | Paraburkholderia phymatum STM815 |
| 216 | 1395743 | 1396021 | + | NZ_CP015958.1 | Paraburkholderia caribensis |
| 217 | 2436947 | 2437210 | + | NZ_CP053986.1 | Achromobacter denitrificans |
| 218 | 1912111 | 1912377 | + | NZ_CP049801.1 | Acinetobacter shaoyimingii |
| 219 | 1547236 | 1547502 | - | NZ_CP049916.1 | Acinetobacter lanii |
| 220 | 3664869 | 3665132 | - | NZ_CP013119.1 | Alcaligenes faecalis |
| 221 | 264755 | 265015 | - | NZ_CP039712.1 | Vagococcus zengguangii |
| 222 | 3444647 | 3444913 | + | NZ_CP036422.1 | Halioglobus maricola |
| 223 | 578803 | 579075 | - | NZ_CP009795.1 | Burkholderia dolosa AU0158 |
| 224 | 2835229 | 2835501 | + | NZ_CP013398.1 | Burkholderia seminalis |
| 225 | 2903393 | 2903665 | + | NZ_CP013401.1 | Burkholderia metallica |
| 226 | 2908985 | 2909257 | + | NZ_CP013450.1 | Burkholderia cenocepacia |
| 227 | 2977256 | 2977528 | + | NZ_CP045235.1 | Burkholderia cepacia |
| 228 | 2408438 | 2408698 | + | NZ_CP016414.1 | Vibrio scophthalmi |
| 229 | 3171772 | 3172032 | - | NZ_CP072133.1 | Pseudoalteromonas xiamenensis |
| 230 | 2080799 | 2081059 | + | NZ_CP031961.1 | Pseudoalteromonas tunicata |
| 231 | 2088778 | 2089044 | + | NZ_CP029397.2 | Acinetobacter defluvii |
| 232 | 1699864 | 1700148 | + | NZ_LR699114.1 | Aquicella lusitana |
| 233 | 4061463 | 4061687 | + | NZ_CP024645.1 | Rhizobacter gummiphilus |
| 234 | 2329948 | 2330214 | - | NZ_CP019343.1 | Oceanicoccus sagamiensis |
| 235 | 3493988 | 3494251 | - | NZ_CP021395.1 | Bordetella hinzii |
| 236 | 535037 | 535309 | + | NZ_CP018787.1 | Oxalobacter formigenes |
| 237 | 1727006 | 1727269 | - | NZ_CP016440.1 | Bordetella pseudohinzii |
| 238 | 2202286 | 2202552 | - | NZ_AP014630.1 | Acinetobacter guillouiae |
| 239 | 1313214 | 1313480 | - | NZ_CP030086.1 | Polynucleobacter paneuropaeus |
| 240 | 602234 | 602506 | + | NZ_CP011503.1 | Burkholderia pyrrocinia |
| 241 | 2254728 | 2254991 | + | NC_010645.1 | Bordetella avium 197N |
| 242 | 309381 | 309644 | - | NZ_LT906482.1 | Eikenella corrodens |
| 243 | 1187585 | 1187848 | - | NZ_CP038018.1 | Eikenella exigua |
| 244 | 1133725 | 1133991 | + | NZ_CP013235.1 | Collimonas arenae |
| 245 | 835354 | 835632 | + | NZ_CP009555.1 | Burkholderia oklahomensis C6786 |
| 246 | 3186070 | 3186348 | + | NZ_CP009727.1 | Burkholderia mallei |
| 247 | 844833 | 845111 | - | NC_007651.1 | Burkholderia thailandensis E264 |
| 248 | 836062 | 836340 | + | NZ_CP008781.1 | Burkholderia pseudomallei |
| 249 | 1905516 | 1905779 | - | NZ_LT907988.1 | Orrella dioscoreae |
| 250 | 1115758 | 1116051 | - | NZ_CP029210.1 | Aquabacterium olei |
| 251 | 2476221 | 2476493 | + | NZ_CP046913.1 | Paraburkholderia acidisoli |
| 252 | 1621223 | 1621489 | + | NZ_CP068285.1 | Ralstonia syzygii subsp. celebesensis |
| 253 | 1364209 | 1364487 | + | NZ_CP031467.1 | Paraburkholderia caffeinilytica |
| 254 | 2354197 | 2354475 | + | NC_021287.1 | Caballeronia insecticola |
| 255 | 2596608 | 2596892 | + | NZ_AP018150.1 | Mycoavidus cysteinexigens |
| 256 | 2353889 | 2354152 | + | NZ_AP018725.1 | Sulfuriflexus mobilis |
| 257 | 2604216 | 2604479 | + | NZ_CP043146.1 | Bordetella holmesii |
| 258 | 1437683 | 1437907 | - | NC_015436.1 | Sphaerochaeta coccoides DSM 17374 |
| 259 | 3864396 | 3864659 | + | NZ_CP043046.1 | Pigmentiphaga aceris |
| 260 | 2300523 | 2300786 | + | NZ_CP058952.1 | Chitinibacter fontanus |
| 261 | 4274085 | 4274354 | - | NZ_CP013232.1 | Collimonas fungivorans |
| 262 | 1303649 | 1303912 | + | NZ_CP014841.1 | Dyella thiooxydans |
| 263 | 2686805 | 2687038 | + | NZ_CP022423.1 | Vitreoscilla filiformis |
| 264 | 1307577 | 1307843 | - | NC_009901.1 | Shewanella pealeana ATCC 700345 |
| 265 | 1370832 | 1371098 | - | NC_010334.1 | Shewanella halifaxensis HAW-EB4 |
| 266 | 524841 | 525104 | + | NZ_CP037953.1 | Permianibacter aggregans |
| 267 | 1893282 | 1893545 | + | NZ_AP018560.1 | Aerosticca soli |
| 268 | 1279073 | 1279342 | + | NZ_CP013236.1 | Collimonas pratensis |
| 269 | 462039 | 462314 | - | NC_014722.1 | Mycetohabitans rhizoxinica HKI 454 |
| 270 | 1015309 | 1015575 | - | NC_010995.1 | Cellvibrio japonicus Ueda107 |
| 271 | 1700030 | 1700296 | - | NZ_CP007501.1 | Polynucleobacter duraquae |
| 272 | 592019 | 592279 | - | NZ_CP047475.1 | Vibrio astriarenae |
| 273 | 2688546 | 2688806 | + | NZ_LT960611.1 | Vibrio tapetis subsp. tapetis |
| 274 | 2544507 | 2544770 | + | NZ_CP049134.1 | Paraburkholderia tropica |
| 275 | 298616 | 298879 | - | NC_015276.1 | Marinomonas mediterranea MMB-1 |
| 276 | 514405 | 514665 | - | NZ_CP030788.1 | Vibrio campbellii |
| 277 | 2686327 | 2686596 | - | NZ_CP060820.1 | Lysobacter solisilvae (ex Woo and Kim 2020) |
| 278 | 2379183 | 2379443 | + | NZ_CP009977.1 | Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 |
| 279 | 3129974 | 3130234 | + | NC_013456.1 | Vibrio antiquarius |
| 280 | 2721630 | 2721890 | + | NZ_CP031781.1 | Vibrio parahaemolyticus |
| 281 | 2490499 | 2490771 | + | NZ_CP046909.1 | Paraburkholderia acidiphila |
| 282 | 1249222 | 1249494 | - | NZ_CP013481.2 | Pandoraea apista |
| 283 | 734347 | 734607 | - | NZ_CP009467.1 | Vibrio harveyi |
| 284 | 4041190 | 4041450 | + | NC_008709.1 | Psychromonas ingrahamii 37 |
| 285 | 2606121 | 2606381 | + | NZ_CP032093.1 | Vibrio alfacsensis |
| 286 | 2167122 | 2167382 | - | NC_017856.1 | Methylophaga frappieri |
| 287 | 2587837 | 2588097 | + | NZ_CP018312.1 | Vibrio rotiferianus |
| 288 | 1292745 | 1293005 | + | NZ_CP019959.1 | Vibrio owensii |
| 289 | 1709955 | 1710215 | + | NZ_CP025792.1 | Vibrio jasicida 090810c |
| 290 | 5024281 | 5024553 | + | NZ_CP013480.3 | Pandoraea norimbergensis |
| 291 | 2567908 | 2568177 | + | NZ_CP041242.1 | Lysobacter alkalisoli |
| 292 | 549712 | 549972 | - | NZ_CP009354.1 | Vibrio tubiashii ATCC 19109 |
| 293 | 634052 | 634312 | - | NC_011312.1 | Aliivibrio salmonicida LFI1238 |
| 294 | 2196305 | 2196565 | + | NZ_AP018685.1 | Vibrio rumoiensis |
| 295 | 2431438 | 2431698 | + | NZ_CP032090.1 | Pseudoalteromonas donghaensis |
| 296 | 1154344 | 1154604 | - | NC_016041.1 | Glaciecola nitratireducens FR1064 |
| 297 | 569027 | 569287 | - | NZ_AP019651.1 | Vibrio taketomensis |
| 298 | 2286918 | 2287178 | + | NZ_AP019657.1 | Vibrio ponticus |
| 299 | 5293519 | 5293782 | - | NZ_LR134302.1 | Achromobacter spanius |
| 300 | 578357 | 578620 | + | NZ_CP054020.1 | Thiomicrorhabdus xiamenensis |
| 301 | 982387 | 982647 | - | NZ_CP013187.1 | Pseudoalteromonas phenolica |
| 302 | 2121080 | 2121373 | - | NZ_CP020121.1 | Comamonas kerstersii |
| 303 | 2263160 | 2263420 | + | NZ_CP033078.1 | Vibrio zhugei |
| 304 | 495228 | 495488 | - | NZ_AP018689.1 | Vibrio aphrogenes |
| 305 | 581465 | 581725 | - | NZ_CP012621.1 | Zobellella denitrificans |
| 306 | 1595705 | 1595971 | + | NZ_CP011930.1 | Herbaspirillum seropedicae |
| 307 | 1426434 | 1426700 | + | NZ_CP013737.1 | Herbaspirillum rubrisubalbicans M1 |
| 308 | 1570501 | 1570767 | + | NZ_CP037993.1 | Herbaspirillum huttiense |
| 309 | 2850960 | 2851220 | + | NZ_AP014635.1 | Vibrio tritonius |
| 310 | 2461104 | 2461364 | - | NZ_CP046793.1 | Vibrio metschnikovii |
| 311 | 233901 | 234161 | - | NZ_CP014035.2 | Vibrio fluvialis |
| 312 | 3104531 | 3104791 | + | NZ_CP040990.1 | Vibrio furnissii |
| 313 | 2966399 | 2966716 | + | NC_015677.1 | Ramlibacter tataouinensis TTB310 |
| 314 | 723634 | 723894 | - | NZ_CP046268.1 | Vibrio spartinae |
| 315 | 2787272 | 2787535 | + | NC_017033.1 | Frateuria aurantia DSM 6220 |
| 316 | 1804093 | 1804359 | - | NZ_CP003915.1 | Advenella mimigardefordensis DPN7 |
| 317 | 1400167 | 1400469 | - | NZ_CP027792.1 | Pulveribacter suum |
| 318 | 1193961 | 1194227 | - | NZ_LT615228.1 | Polynucleobacter necessarius |
| 319 | 86494 | 86754 | - | NZ_CP051180.1 | Ferrimonas lipolytica |
| 320 | 682656 | 682916 | - | NZ_CP044069.1 | Vibrio vulnificus |
| 321 | 1826434 | 1826700 | - | NC_009379.1 | Polynucleobacter asymbioticus QLW-P1DMWA-1 |
| 322 | 1236540 | 1236803 | - | NZ_AP018558.1 | Hydrogenophilus thermoluteolus |
| 323 | 592260 | 592520 | - | NC_017857.3 | Methylophaga nitratireducenticrescens |
| 324 | 89568 | 89846 | - | NZ_CP012676.1 | Pseudomonas versuta |
| 325 | 1563622 | 1563885 | - | NC_015581.1 | Thiomicrospira cyclica ALM1 |
| 326 | 3241217 | 3241480 | + | NC_012691.1 | Tolumonas auensis DSM 9187 |
| 327 | 828417 | 828695 | - | NZ_CP062158.2 | Pseudomonas lundensis |
| 328 | 850107 | 850367 | - | NC_014541.1 | Ferrimonas balearica DSM 9799 |
| 329 | 3349466 | 3349729 | + | NZ_CP040449.1 | Aeromonas simiae |
| 330 | 2247185 | 2247448 | - | NZ_CP033040.1 | Thiomicrorhabdus indica |
| 331 | 2155989 | 2156258 | + | NC_016147.2 | Pseudoxanthomonas spadix BD-a59 |
| 332 | 4236566 | 4236838 | + | NC_023018.2 | Pandoraea pnomenusa |
| 333 | 1151257 | 1151523 | - | NZ_CP012943.1 | Ralstonia solanacearum |
| 334 | 1993588 | 1993851 | - | NZ_CP040602.1 | Thiomicrorhabdus sediminis |
| 335 | 1909157 | 1909429 | - | NZ_CP047385.1 | Pandoraea fibrosis |
| 336 | 4457333 | 4457605 | + | NZ_CP011253.3 | Pandoraea oxalativorans |
| 337 | 4577942 | 4578214 | + | NZ_LT906435.1 | Pandoraea sputorum |
| 338 | 1391332 | 1391595 | + | NZ_CP028901.1 | Algicoccus marinus |
| 339 | 1032420 | 1032686 | - | NZ_CP011257.1 | Ralstonia mannitolilytica |
| 340 | 4487754 | 4488026 | + | NZ_CP010897.2 | Pandoraea vervacti |
| 341 | 4112294 | 4112566 | + | NZ_CP011807.3 | Pandoraea faecigallinarum |
| 342 | 4712851 | 4713123 | + | NZ_CP010310.2 | Pandoraea pulmonicola |
| 343 | 839634 | 839852 | - | NZ_CP017326.1 | Weissella soli |
| 344 | 885713 | 885931 | + | NZ_CP027563.1 | Weissella confusa |
| 345 | 2889537 | 2889806 | - | NZ_CP016022.1 | Ralstonia insidiosa |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_012968.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF03023.16 | 0.7 | 240 | 253.5 | opposite-strand | Lipid II flippase MurJ |
| 2 | PF14667.8 | 0.68 | 234 | 254.0 | opposite-strand | Polysaccharide biosynthesis C-terminal domain |
++ More..