Result : P44269
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein HI_1601 |
| NCBI Accession ID | L42023.1 |
| Organism | Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) |
| Left | 1668392 |
| Right | 1668679 |
| Strand | - |
| Nucleotide Sequence | ATGAAAAAATTAGCAACATTAACAGCATTAGCAGGTGCATTAACGATGGCAGTAGCGACAGCAGCACAGGCTGAATCAAAGTCAAGCAGTACTGATAATACAGCAACACCTTGTGTGGGCGATAAATGTGTCAAAACAAAAGCTGCAGAAGGTAAATGTGGTGAAGGCAAATGCGGTGCAGACAAAGCTAAATCTGCAGAAGGTAAATGTGGTGAAGGCAAATGCGGTGCAGACAAAGCTAAATCTGCTGAAGGCAAATGTGGCGAAGGTAAATGCGGTTCTAAATAA |
| Sequence | MKKLATLTALAGALTMAVATAAQAESKSSSTDNTATPCVGDKCVKTKAAEGKCGEGKCGADKAKSAEGKCGEGKCGADKAKSAEGKCGEGKCGSK |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of COG3767. Profile Description: Uncharacterized low-complexity protein [Function unknown]. |
| Pubmed ID | 7542800 |
| Domain | CDD:226290 |
| Functional Category | Others |
| Uniprot ID | P44269 |
| ORF Length (Amino Acid) | 95 |
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| Conservation Analysis |
No. of Species: 10
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1319056 | 1319343 | + | NZ_LS483429.1 | Haemophilus aegyptius |
| 2 | 1599207 | 1599494 | - | NZ_CP009610.1 | Haemophilus influenzae |
| 3 | 1748295 | 1748582 | + | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
| 4 | 1769592 | 1769837 | + | NZ_CP055305.1 | Mannheimia pernigra |
| 5 | 1709798 | 1710043 | + | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
| 6 | 1639357 | 1639602 | + | NZ_CP046531.1 | Mannheimia ovis |
| 7 | 1152393 | 1152689 | + | NZ_CP022278.1 | Neisseria chenwenguii |
| 8 | 1448601 | 1448837 | + | NZ_CP018804.1 | Histophilus somni |
| 9 | 1878842 | 1879117 | - | NZ_LR134516.1 | Neisseria animaloris |
| 10 | 887004 | 887273 | - | NZ_AP018725.1 | Sulfuriflexus mobilis |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LS483429.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF07681.14 | 1.0 | 10 | 68.0 | same-strand | DoxX |
| 2 | PF05114.15 | 1.0 | 10 | 89.5 | same-strand | Protein of unknown function (DUF692) |
| 3 | PF09836.11 | 1.0 | 10 | 1001.0 | same-strand | Putative DNA-binding domain |
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