Protein Information |
Information Type | Description |
---|---|
Protein name | Uncharacterized protein HI_1601 |
NCBI Accession ID | L42023.1 |
Organism | Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) |
Left | 1668392 |
Right | 1668679 |
Strand | - |
Nucleotide Sequence | ATGAAAAAATTAGCAACATTAACAGCATTAGCAGGTGCATTAACGATGGCAGTAGCGACAGCAGCACAGGCTGAATCAAAGTCAAGCAGTACTGATAATACAGCAACACCTTGTGTGGGCGATAAATGTGTCAAAACAAAAGCTGCAGAAGGTAAATGTGGTGAAGGCAAATGCGGTGCAGACAAAGCTAAATCTGCAGAAGGTAAATGTGGTGAAGGCAAATGCGGTGCAGACAAAGCTAAATCTGCTGAAGGCAAATGTGGCGAAGGTAAATGCGGTTCTAAATAA |
Sequence | MKKLATLTALAGALTMAVATAAQAESKSSSTDNTATPCVGDKCVKTKAAEGKCGEGKCGADKAKSAEGKCGEGKCGADKAKSAEGKCGEGKCGSK |
Source of smORF | Swiss-Prot |
Function | The ORF matches to the profile of COG3767. Profile Description: Uncharacterized low-complexity protein [Function unknown]. |
Pubmed ID | 7542800 |
Domain | CDD:226290 |
Functional Category | Others |
Uniprot ID | P44269 |
ORF Length (Amino Acid) | 95 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 1319056 | 1319343 | + | NZ_LS483429.1 | Haemophilus aegyptius |
2 | 1599207 | 1599494 | - | NZ_CP009610.1 | Haemophilus influenzae |
3 | 1748295 | 1748582 | + | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
4 | 1769592 | 1769837 | + | NZ_CP055305.1 | Mannheimia pernigra |
5 | 1709798 | 1710043 | + | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
6 | 1639357 | 1639602 | + | NZ_CP046531.1 | Mannheimia ovis |
7 | 1152393 | 1152689 | + | NZ_CP022278.1 | Neisseria chenwenguii |
8 | 1448601 | 1448837 | + | NZ_CP018804.1 | Histophilus somni |
9 | 1878842 | 1879117 | - | NZ_LR134516.1 | Neisseria animaloris |
10 | 887004 | 887273 | - | NZ_AP018725.1 | Sulfuriflexus mobilis |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF07681.14 | 1.0 | 10 | 68.0 | same-strand | DoxX |
2 | PF05114.15 | 1.0 | 10 | 89.5 | same-strand | Protein of unknown function (DUF692) |
3 | PF09836.11 | 1.0 | 10 | 1001.0 | same-strand | Putative DNA-binding domain |