Result : P44076
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein HI_0926 |
| NCBI Accession ID | L42023.1 |
| Organism | Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) |
| Left | 984395 |
| Right | 984655 |
| Strand | - |
| Nucleotide Sequence | ATGAGCAAACCCATTCTTTTTTATGCAGAAACATGCCCAGATACCGCGCCATTTGTCGCGGAGTTGGATCGCTTAGGTGTGGATTACGATGAAGTAGAAATTATGACTTCATTACCTAATCTCAAACAATTCATTCGTTTACGCGATAGCAGTGCAGAATTTGATAACTCGAAAGCAAATGGCTATTTAGGCATTCCTGCATTGTTATTACCAAATGGCGATGTTGTTTTAGACCTATCAAAGTTAAAAGTAATTTTTTAA |
| Sequence | MSKPILFYAETCPDTAPFVAELDRLGVDYDEVEIMTSLPNLKQFIRLRDSSAEFDNSKANGYLGIPALLLPNGDVVLDLSKLKVIF |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl00388. Profile Description: Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold. Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. |
| Pubmed ID | 7542800 |
| Domain | CDD:412351 |
| Functional Category | Others |
| Uniprot ID | P44076 |
| ORF Length (Amino Acid) | 86 |
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| Conservation Analysis |
No. of Species: 22
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 70366 | 70626 | + | NZ_CP009610.1 | Haemophilus influenzae |
| 2 | 71699 | 71959 | + | NZ_LS483429.1 | Haemophilus aegyptius |
| 3 | 220805 | 221065 | - | NZ_LS483458.1 | Haemophilus haemolyticus |
| 4 | 43869 | 44126 | + | NZ_LT906463.1 | Haemophilus pittmaniae |
| 5 | 507662 | 507871 | + | NZ_LS483443.1 | Aggregatibacter segnis ATCC 33393 |
| 6 | 1314964 | 1315227 | + | NZ_LT906448.1 | Pasteurella dagmatis |
| 7 | 397459 | 397722 | + | NZ_CP028926.1 | Pasteurella multocida |
| 8 | 814702 | 814968 | - | NZ_LR134167.1 | Avibacterium volantium |
| 9 | 329671 | 329934 | - | NZ_CP055305.1 | Mannheimia pernigra |
| 10 | 2050360 | 2050569 | - | NZ_CP006954.1 | Bibersteinia trehalosi USDA-ARS-USMARC-188 |
| 11 | 1536231 | 1536497 | + | NC_011852.1 | Glaesserella parasuis SH0165 |
| 12 | 162541 | 162750 | + | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
| 13 | 585065 | 585325 | + | NZ_CP061280.1 | Mannheimia bovis |
| 14 | 1585723 | 1585986 | - | NZ_CP018804.1 | Histophilus somni |
| 15 | 2031013 | 2031222 | - | NZ_CP006944.1 | Mannheimia varigena USDA-ARS-USMARC-1312 |
| 16 | 361618 | 361878 | + | NZ_CP015029.1 | Frederiksenia canicola |
| 17 | 320350 | 320616 | - | NZ_CP029206.1 | Actinobacillus porcitonsillarum |
| 18 | 109657 | 109920 | - | NZ_CP029206.1 | Actinobacillus porcitonsillarum |
| 19 | 300690 | 300947 | - | NZ_CP046531.1 | Mannheimia ovis |
| 20 | 245796 | 246059 | + | NZ_CP016180.1 | Pasteurella skyensis |
| 21 | 952589 | 952804 | + | NZ_CP016953.1 | Streptococcus himalayensis |
| 22 | 425206 | 425421 | - | NZ_CP015196.1 | Streptococcus marmotae |
| 23 | 1805424 | 1805669 | - | NZ_CP023434.1 | Suicoccus acidiformans |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP009610.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF02091.17 | 0.86 | 19 | 59 | same-strand | Glycyl-tRNA synthetase alpha subunit |
| 2 | PF02092.19 | 0.77 | 17 | 1570 | same-strand | Glycyl-tRNA synthetase beta subunit |
| 3 | PF05746.17 | 0.77 | 17 | 1570 | same-strand | DALR anticodon binding domain |
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