Result : P44030
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized HTH-type transcriptional regulator HI_0659 |
| NCBI Accession ID | L42023.1 |
| Organism | Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) |
| Left | 702730 |
| Right | 703026 |
| Strand | - |
| Nucleotide Sequence | ATGAATAAAATCAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGAGAAAGTAATTTGCGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGCCAGCAACTTGGGATTTCCCAAAAACAACTTGAAACCTTAAGCGGTGTGAAGCAACCTATGATTGCACGCATTGAAAAAGGACAAACGAATCCTCAGCTTGAAACGTTGTTAAAATTGCTCGCTCCTTTAGGGAAAACCCTGTCGATTGTTCCTCTAAGGGTAAAAAATGCCTAA |
| Sequence | MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKLLAPLGKTLSIVPLRVKNA |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl22854. Profile Description: N/A. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254. |
| Pubmed ID | 7542800 |
| Domain | CDD:419869 |
| Functional Category | DNA-binding |
| Uniprot ID | P44030 |
| ORF Length (Amino Acid) | 98 |
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| Conservation Analysis |
No. of Species: 11
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 377631 | 377927 | + | NZ_CP009610.1 | Haemophilus influenzae |
| 2 | 401397 | 401693 | + | NZ_LS483429.1 | Haemophilus aegyptius |
| 3 | 1588635 | 1588928 | - | NZ_CP030753.1 | Actinobacillus pleuropneumoniae |
| 4 | 2430495 | 2430743 | + | NZ_CP009159.1 | Actinobacillus suis ATCC 33415 |
| 5 | 2367363 | 2367611 | + | NZ_CP007715.1 | Actinobacillus equuli subsp. equuli |
| 6 | 2041518 | 2041808 | + | NZ_CP014699.1 | Streptococcus pantholopis |
| 7 | 569663 | 569956 | + | NC_015875.1 | Streptococcus pseudopneumoniae IS7493 |
| 8 | 752461 | 752718 | + | NC_017581.1 | Streptococcus thermophilus JIM 8232 |
| 9 | 1325189 | 1325446 | + | NZ_CP032620.1 | Streptococcus koreensis |
| 10 | 1358547 | 1358807 | - | NZ_CP012805.1 | Streptococcus anginosus |
| 11 | 570475 | 570741 | - | NZ_CP016757.1 | Cloacibacillus porcorum |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LS483429.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF05973.16 | 0.73 | 8 | 23.0 | same-strand | Phage derived protein Gp49-like (DUF891) |
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