Result : P42456
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | leu leader peptide (leuA operon attenuator peptide) |
| NCBI Accession ID | |
| Organism | Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) |
| Left | |
| Right | |
| Strand | |
| Nucleotide Sequence | |
| Sequence | MLHHMTSRANLLLLRRGGSQRS |
| Source of smORF | Swiss-Prot |
| Function | Involved in control of the biosynthesis of leucine. {ECO:0000250}. |
| Pubmed ID | 8117072 12743753 12948626 |
| Domain | |
| Functional Category | Others |
| Uniprot ID | P42456 |
| ORF Length (Amino Acid) | 22 |
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| Conservation Analysis |
No. of Species: 9
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 397779 | 397847 | - | NZ_AP017369.1 | Corynebacterium suranareeae |
| 2 | 251360 | 251428 | - | NC_020506.1 | Corynebacterium callunae DSM 20147 |
| 3 | 280325 | 280381 | - | NZ_CP009220.1 | Corynebacterium deserti GIMN1.010 |
| 4 | 284956 | 285012 | - | NZ_CP015622.1 | Corynebacterium crudilactis |
| 5 | 206595 | 206651 | - | NZ_CP007790.1 | Corynebacterium marinum DSM 44953 |
| 6 | 160365 | 160427 | - | NZ_CP011312.1 | Corynebacterium kutscheri |
| 7 | 176960 | 177022 | - | NZ_LN831026.1 | Corynebacterium diphtheriae |
| 8 | 186015 | 186074 | - | NZ_CP008944.1 | Corynebacterium atypicum |
| 9 | 246848 | 246910 | - | NZ_LR738855.1 | Corynebacterium rouxii |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_AP017369.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF07685.16 | 0.67 | 6 | 4991.0 | same-strand | CobB/CobQ-like glutamine amidotransferase domain |
| 2 | PF08353.12 | 0.78 | 7 | 3859 | same-strand | MurT ligase C-terminal |
| 3 | PF08245.14 | 0.67 | 6 | 3723.5 | same-strand | Mur ligase middle domain |
| 4 | PF00682.21 | 1.0 | 9 | 84 | same-strand | HMGL-like |
| 5 | PF08502.12 | 1.0 | 9 | 84 | same-strand | LeuA allosteric (dimerisation) domain |
| 6 | PF00696.30 | 0.67 | 6 | 1871.5 | opposite-strand | Amino acid kinase family |
| 7 | PF13840.8 | 0.67 | 6 | 1871.5 | opposite-strand | ACT domain |
| 8 | PF01842.27 | 0.67 | 6 | 1871.5 | opposite-strand | ACT domain |
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