ProsmORF-pred
Result : P42320
Protein Information
Information Type Description
Protein name Uncharacterized protein YxiJ
NCBI Accession ID D83026.1
Organism Bacillus subtilis (strain 168)
Left 4155
Right 4451
Strand +
Nucleotide Sequence GTGCTTCAAAAACTGAGAAAAAGACAGCGAGAGCTTGAAGAAAAGCAGTACCCTGATGAATTGTACGGCTTTGAAGCGGAAATCTATGAGTTTTTTATGCTTGTTGCTGGCAGTTTGGATTATGTGCTGGCGAATAAAAGGATACCCCGGCATCAGCGGCGTTCGTTGGAGAAAAGCTTTTTTGAGCTGTATCCTGACATACTTCCGGATATGATCAAAAACGATAAGGATCTGTATCATCACATTCTCTTGTATGAACAAGTCAGACAAGAGATTTGCGTTGCGCTATCCAACTGA
Sequence MLQKLRKRQRELEEKQYPDELYGFEAEIYEFFMLVAGSLDYVLANKRIPRHQRRSLEKSFFELYPDILPDMIKNDKDLYHHILLYEQVRQEICVALSN
Source of smORF Swiss-Prot
Function
Pubmed ID 8969509 9384377
Domain
Functional Category Others
Uniprot ID P42320
ORF Length (Amino Acid) 98
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Conservation Analysis
Conservation Analysis
No. of Species: 7
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 4019625 4019921 - NC_000964.3 Bacillus subtilis subsp. subtilis str. 168
2 3840038 3840334 - NZ_CP048852.1 Bacillus tequilensis
3 3910822 3911118 - NZ_CP013984.1 Bacillus inaquosorum
4 2214488 2214784 + NZ_CP029364.1 Bacillus halotolerans
5 3851390 3851686 - NZ_CP034943.1 Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499
6 3835136 3835432 - NZ_CP051464.1 Bacillus mojavensis
7 3905034 3905330 - NZ_CP033052.1 Bacillus vallismortis
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_CP013984.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF10898.10 0.86 6 456.5 same-strand Protein of unknown function (DUF2716)
2 PF11193.10 0.71 5 828 opposite-strand Protein of unknown function (DUF2812)
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