Result : P39212
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Putative transposase InsN for insertion sequence element IS911B |
| NCBI Accession ID | AP009048.1 |
| Organism | Escherichia coli (strain K12) |
| Left | 4511877 |
| Right | 4512143 |
| Strand | + |
| Nucleotide Sequence | ATGAAAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTTGTTGACCAGAAATACACGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAG |
| Sequence | MKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRKLRKKLQRIEMENEILKRLL |
| Source of smORF | Swiss-Prot |
| Function | Involved in the transposition of the insertion sequence IS911. |
| Pubmed ID | 7610040 9278503 16738553 |
| Domain | CDD:419669 |
| Functional Category | DNA-binding |
| Uniprot ID | P39212 |
| ORF Length (Amino Acid) | 88 |
++ More..
| Conservation Analysis |
No. of Species: 70
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 4507197 | 4507463 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 2 | 216826 | 217128 | + | NC_004851.1 | Shigella flexneri 2a str. 301 |
| 3 | 710018 | 710320 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 4 | 1096052 | 1096354 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 5 | 1834975 | 1835277 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 6 | 2478177 | 2478479 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 7 | 2347124 | 2347426 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 8 | 2070002 | 2070304 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 9 | 1962471 | 1962773 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 10 | 1944825 | 1945127 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 11 | 1878959 | 1879261 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 12 | 2953478 | 2953780 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 13 | 1633008 | 1633310 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 14 | 902713 | 903015 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 15 | 717082 | 717384 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 16 | 539494 | 539796 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 17 | 238328 | 238630 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 18 | 4393594 | 4393896 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 19 | 969737 | 970039 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 20 | 3156064 | 3156366 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 21 | 3066414 | 3066716 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 22 | 2823812 | 2824114 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 23 | 2555761 | 2556063 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 24 | 1843424 | 1843726 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 25 | 2385301 | 2385603 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 26 | 2274201 | 2274503 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 27 | 2526424 | 2526726 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 28 | 1793956 | 1794258 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 29 | 2637420 | 2637722 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 30 | 2938763 | 2939065 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 31 | 3776721 | 3777023 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 32 | 3964826 | 3965128 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 33 | 1518042 | 1518344 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 34 | 3056873 | 3057175 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 35 | 2937835 | 2938137 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 36 | 4549802 | 4550104 | - | NZ_AP014857.1 | Escherichia albertii |
| 37 | 2160138 | 2160440 | + | NZ_AP014857.1 | Escherichia albertii |
| 38 | 2139417 | 2139719 | - | NZ_AP014857.1 | Escherichia albertii |
| 39 | 3608016 | 3608318 | + | NZ_AP014857.1 | Escherichia albertii |
| 40 | 14383 | 14688 | + | NC_002128.1 | Escherichia coli O157:H7 str. Sakai |
| 41 | 134307 | 134609 | + | NZ_CP045203.1 | Citrobacter telavivensis |
| 42 | 4085349 | 4085651 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 43 | 3900014 | 3900316 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 44 | 1314144 | 1314446 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 45 | 2580103 | 2580405 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 46 | 3759034 | 3759336 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 47 | 4105593 | 4105895 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 48 | 288484 | 288795 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 49 | 4310350 | 4310652 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 50 | 3149996 | 3150298 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 51 | 359404 | 359706 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 52 | 3608944 | 3609246 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 53 | 2198819 | 2199121 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 54 | 3276268 | 3276570 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 55 | 2672297 | 2672599 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 56 | 99028 | 99330 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 57 | 80919 | 81218 | + | NZ_CP026049.1 | Raoultella planticola |
| 58 | 52154 | 52456 | + | NZ_CP026049.1 | Raoultella planticola |
| 59 | 4061046 | 4061348 | - | NZ_CP019706.1 | Pantoea alhagi |
| 60 | 323765 | 324067 | + | NZ_CP019706.1 | Pantoea alhagi |
| 61 | 526199 | 526501 | + | NZ_CP019706.1 | Pantoea alhagi |
| 62 | 3494189 | 3494491 | - | NZ_CP019706.1 | Pantoea alhagi |
| 63 | 1007123 | 1007425 | + | NZ_CP019706.1 | Pantoea alhagi |
| 64 | 2538535 | 2538837 | + | NZ_CP019706.1 | Pantoea alhagi |
| 65 | 2857976 | 2858278 | + | NC_010554.1 | Proteus mirabilis HI4320 |
| 66 | 1009193 | 1009495 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 67 | 2512624 | 2512926 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 68 | 1508656 | 1508958 | + | NZ_CP023009.1 | Lonsdalea britannica |
| 69 | 2460626 | 2460928 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 70 | 1617711 | 1618013 | + | NZ_CP023009.1 | Lonsdalea britannica |
| 71 | 2058502 | 2058804 | + | NZ_CP023009.1 | Lonsdalea britannica |
| 72 | 890586 | 890888 | - | NZ_CP023567.1 | Erwinia pyrifoliae |
| 73 | 2930319 | 2930621 | - | NZ_CP023567.1 | Erwinia pyrifoliae |
| 74 | 1163606 | 1163908 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 75 | 2618786 | 2619088 | - | NZ_CP023567.1 | Erwinia pyrifoliae |
| 76 | 1665518 | 1665820 | - | NZ_CP023567.1 | Erwinia pyrifoliae |
| 77 | 2772753 | 2773055 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 78 | 2869217 | 2869519 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 79 | 3301472 | 3301774 | - | NZ_CP065534.1 | Lonsdalea populi |
| 80 | 3261754 | 3262056 | - | NZ_CP065534.1 | Lonsdalea populi |
| 81 | 926743 | 927045 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 82 | 431032 | 431334 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 83 | 320941 | 321243 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 84 | 1290382 | 1290684 | + | NZ_CP034035.1 | Brenneria rubrifaciens |
| 85 | 3710846 | 3711148 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 86 | 3580697 | 3580999 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 87 | 717553 | 717855 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 88 | 2248494 | 2248796 | + | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 89 | 897314 | 897616 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 90 | 661406 | 661708 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 91 | 101442 | 101744 | - | NC_015963.1 | Enterobacter soli |
| 92 | 146644 | 146946 | + | NC_015963.1 | Enterobacter soli |
| 93 | 2927349 | 2927651 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 94 | 2054508 | 2054810 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 95 | 80083 | 80385 | - | NZ_CP023526.1 | Cedecea neteri |
| 96 | 2895349 | 2895651 | + | NZ_LR134201.1 | Cedecea lapagei |
| 97 | 4250011 | 4250313 | - | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 98 | 5035671 | 5035973 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 99 | 3966362 | 3966664 | - | NC_017554.1 | Pantoea ananatis PA13 |
| 100 | 1073056 | 1073358 | + | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 101 | 3194043 | 3194345 | - | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 102 | 65040 | 65342 | - | NZ_CP051549.1 | Phytobacter diazotrophicus |
| 103 | 1634733 | 1635035 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 104 | 3799973 | 3800227 | - | NZ_CP038498.1 | Pectobacterium punjabense |
| 105 | 1930612 | 1930866 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 106 | 523013 | 523267 | - | NZ_CP038498.1 | Pectobacterium punjabense |
| 107 | 3328265 | 3328567 | + | NZ_CP033744.1 | Citrobacter freundii |
| 108 | 865173 | 865481 | + | NZ_CP041783.1 | Shewanella donghaensis |
| 109 | 2129968 | 2130276 | + | NZ_CP041783.1 | Shewanella donghaensis |
| 110 | 834784 | 835092 | - | NZ_AP014525.1 | Vibrio cholerae MS6 |
| 111 | 318462 | 318770 | + | NZ_AP014525.1 | Vibrio cholerae MS6 |
| 112 | 747969 | 748277 | - | NZ_AP014525.1 | Vibrio cholerae MS6 |
| 113 | 423729 | 424037 | + | NZ_AP014525.1 | Vibrio cholerae MS6 |
| 114 | 445273 | 445581 | + | NZ_AP014525.1 | Vibrio cholerae MS6 |
| 115 | 1793346 | 1793654 | - | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 116 | 1440234 | 1440542 | + | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 117 | 813228 | 813536 | - | NZ_CP033078.1 | Vibrio zhugei |
| 118 | 811934 | 812242 | - | NZ_CP033078.1 | Vibrio zhugei |
| 119 | 788921 | 789229 | - | NZ_CP033078.1 | Vibrio zhugei |
| 120 | 1204058 | 1204360 | + | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 121 | 1156727 | 1157035 | - | NZ_CP044069.1 | Vibrio vulnificus |
| 122 | 1036117 | 1036425 | - | NZ_CP044068.1 | Vibrio vulnificus |
| 123 | 49672 | 49983 | + | NZ_CP067058.1 | Rahnella aceris |
| 124 | 149182 | 149493 | + | NZ_CP067058.1 | Rahnella aceris |
| 125 | 3164504 | 3164815 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 126 | 4916584 | 4916895 | - | NC_014306.1 | Erwinia billingiae Eb661 |
| 127 | 3109757 | 3110068 | - | NC_014306.1 | Erwinia billingiae Eb661 |
| 128 | 3578313 | 3578624 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 129 | 1476505 | 1476816 | - | NZ_CP067057.1 | Rahnella aceris |
| 130 | 1320519 | 1320827 | + | NZ_CP014034.2 | Vibrio fluvialis |
| 131 | 4719419 | 4719667 | - | NC_011566.1 | Shewanella piezotolerans WP3 |
| 132 | 4374283 | 4374531 | - | NC_011566.1 | Shewanella piezotolerans WP3 |
| 133 | 2277853 | 2278101 | - | NC_011566.1 | Shewanella piezotolerans WP3 |
| 134 | 4708437 | 4708685 | + | NC_011566.1 | Shewanella piezotolerans WP3 |
| 135 | 5286323 | 5286571 | + | NC_011566.1 | Shewanella piezotolerans WP3 |
| 136 | 107723 | 108034 | - | NZ_CP054057.1 | Scandinavium goeteborgense |
| 137 | 417 | 671 | - | NZ_CP005973.1 | Photobacterium gaetbulicola Gung47 |
| 138 | 2366693 | 2366947 | - | NZ_CP005974.1 | Photobacterium gaetbulicola Gung47 |
| 139 | 1675038 | 1675292 | + | NZ_CP005974.1 | Photobacterium gaetbulicola Gung47 |
| 140 | 2246927 | 2247238 | - | NZ_AP018689.1 | Vibrio aphrogenes |
| 141 | 488216 | 488527 | + | NC_011312.1 | Aliivibrio salmonicida LFI1238 |
| 142 | 3605 | 3916 | + | NZ_CP040989.1 | Vibrio furnissii |
| 143 | 3671540 | 3671800 | - | NZ_LR134531.1 | Pragia fontium |
| 144 | 3076341 | 3076652 | - | NZ_CP011036.1 | Pseudoalteromonas nigrifaciens |
| 145 | 1056284 | 1056595 | - | NZ_CP034015.1 | Shewanella livingstonensis |
| 146 | 2665528 | 2665839 | - | NC_016901.1 | Shewanella baltica OS678 |
| 147 | 4970138 | 4970449 | + | NC_016901.1 | Shewanella baltica OS678 |
| 148 | 5156247 | 5156558 | - | NC_016901.1 | Shewanella baltica OS678 |
| 149 | 2704373 | 2704684 | - | NC_016901.1 | Shewanella baltica OS678 |
| 150 | 38720 | 39031 | - | NC_016905.1 | Shewanella baltica OS678 |
| 151 | 4786646 | 4786957 | - | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 152 | 4294728 | 4295039 | - | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 153 | 810479 | 810790 | + | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 154 | 883550 | 883861 | + | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 155 | 1018193 | 1018504 | + | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 156 | 2429661 | 2429972 | + | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 157 | 1916762 | 1917073 | - | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 158 | 3623223 | 3623534 | + | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 159 | 3762942 | 3763253 | + | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 160 | 2656196 | 2656432 | - | NZ_CP072844.1 | Psychrosphaera aestuarii |
| 161 | 136855 | 137124 | - | NZ_CP070626.1 | Photobacterium damselae subsp. damselae |
| 162 | 1227071 | 1227382 | - | NZ_CP040990.1 | Vibrio furnissii |
| 163 | 2877242 | 2877490 | - | NZ_CP011041.1 | Pseudoalteromonas tetraodonis |
| 164 | 1497223 | 1497471 | - | NZ_CP011041.1 | Pseudoalteromonas tetraodonis |
| 165 | 252163 | 252414 | - | NZ_CP021376.1 | Oceanisphaera avium |
| 166 | 1295226 | 1295477 | + | NZ_CP021376.1 | Oceanisphaera avium |
| 167 | 1289889 | 1290140 | - | NZ_CP021376.1 | Oceanisphaera avium |
| 168 | 2083188 | 2083439 | + | NZ_CP021376.1 | Oceanisphaera avium |
| 169 | 2090754 | 2091005 | + | NZ_CP021376.1 | Oceanisphaera avium |
| 170 | 457387 | 457698 | - | NZ_CP011037.1 | Pseudoalteromonas nigrifaciens |
| 171 | 359954 | 360265 | - | NZ_CP011026.1 | Pseudoalteromonas arctica A 37-1-2 |
| 172 | 127337 | 127648 | - | NZ_CP011026.1 | Pseudoalteromonas arctica A 37-1-2 |
| 173 | 608755 | 609066 | + | NZ_CP011025.1 | Pseudoalteromonas arctica A 37-1-2 |
| 174 | 774204 | 774515 | + | NZ_CP011025.1 | Pseudoalteromonas arctica A 37-1-2 |
| 175 | 2953449 | 2953760 | - | NZ_CP011025.1 | Pseudoalteromonas arctica A 37-1-2 |
| 176 | 2184160 | 2184471 | - | NZ_CP011025.1 | Pseudoalteromonas arctica A 37-1-2 |
| 177 | 2084138 | 2084449 | + | NZ_CP011025.1 | Pseudoalteromonas arctica A 37-1-2 |
| 178 | 328052 | 328303 | - | NZ_CP052766.1 | Alteromonas pelagimontana |
| 179 | 2445192 | 2445431 | + | NZ_CP052766.1 | Alteromonas pelagimontana |
| 180 | 4439442 | 4439756 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 181 | 878632 | 878895 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 182 | 578775 | 579086 | + | NZ_CP014782.1 | Shewanella psychrophila |
| 183 | 2829024 | 2829335 | - | NZ_CP014782.1 | Shewanella psychrophila |
| 184 | 4005350 | 4005661 | + | NZ_CP014782.1 | Shewanella psychrophila |
| 185 | 5444361 | 5444672 | - | NZ_CP014782.1 | Shewanella psychrophila |
| 186 | 615528 | 615839 | + | NC_011313.1 | Aliivibrio salmonicida LFI1238 |
| 187 | 1825540 | 1825848 | + | NZ_CP022272.1 | Shewanella marisflavi |
| 188 | 2799330 | 2799638 | + | NZ_CP022272.1 | Shewanella marisflavi |
| 189 | 3256471 | 3256779 | + | NZ_CP022272.1 | Shewanella marisflavi |
| 190 | 827829 | 828137 | - | NZ_CP022272.1 | Shewanella marisflavi |
| 191 | 3839653 | 3839961 | + | NZ_CP022272.1 | Shewanella marisflavi |
| 192 | 2915942 | 2916250 | + | NZ_CP022272.1 | Shewanella marisflavi |
| 193 | 1906956 | 1907264 | + | NZ_CP022272.1 | Shewanella marisflavi |
| 194 | 4560548 | 4560856 | + | NC_009092.1 | Shewanella loihica PV-4 |
| 195 | 2126807 | 2127061 | + | NZ_CP043042.1 | Marinobacter fonticola |
| 196 | 3481826 | 3482077 | - | NZ_CP058952.1 | Chitinibacter fontanus |
| 197 | 3075438 | 3075689 | - | NZ_CP058952.1 | Chitinibacter fontanus |
| 198 | 1736712 | 1736963 | - | NZ_CP058952.1 | Chitinibacter fontanus |
| 199 | 1421260 | 1421511 | - | NZ_CP058952.1 | Chitinibacter fontanus |
| 200 | 1014418 | 1014729 | - | NZ_AP014636.1 | Vibrio tritonius |
| 201 | 1462781 | 1463092 | - | NZ_AP014635.1 | Vibrio tritonius |
| 202 | 1451815 | 1452069 | + | NZ_CP014226.1 | Halomonas chromatireducens |
| 203 | 4582500 | 4582814 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 204 | 3312913 | 3313212 | - | NC_007498.2 | Syntrophotalea carbinolica DSM 2380 |
| 205 | 1253053 | 1253361 | + | NZ_CP042382.1 | Pistricoccus aurantiacus |
| 206 | 1262651 | 1262959 | + | NZ_CP042382.1 | Pistricoccus aurantiacus |
| 207 | 1216248 | 1216556 | - | NZ_CP042382.1 | Pistricoccus aurantiacus |
| 208 | 2619793 | 2620044 | - | NZ_CP032093.1 | Vibrio alfacsensis |
| 209 | 2488803 | 2489054 | - | NZ_CP032093.1 | Vibrio alfacsensis |
| 210 | 1785530 | 1785781 | - | NZ_CP032093.1 | Vibrio alfacsensis |
| 211 | 1794619 | 1794876 | + | NZ_CP032093.1 | Vibrio alfacsensis |
| 212 | 1806093 | 1806350 | + | NZ_CP032093.1 | Vibrio alfacsensis |
| 213 | 617355 | 617606 | - | NZ_CP032094.1 | Vibrio alfacsensis |
| 214 | 920552 | 920803 | - | NZ_CP032094.1 | Vibrio alfacsensis |
| 215 | 930591 | 930842 | + | NZ_CP032094.1 | Vibrio alfacsensis |
| 216 | 64411 | 64668 | + | NZ_CP032094.1 | Vibrio alfacsensis |
| 217 | 1222961 | 1223218 | + | NZ_CP032094.1 | Vibrio alfacsensis |
| 218 | 2197220 | 2197531 | - | NZ_CP007142.1 | Gynuella sunshinyii YC6258 |
| 219 | 1721071 | 1721379 | + | NC_017856.1 | Methylophaga frappieri |
| 220 | 1062061 | 1062309 | - | NC_002516.2 | Pseudomonas aeruginosa PAO1 |
| 221 | 2118645 | 2118893 | + | NC_002516.2 | Pseudomonas aeruginosa PAO1 |
| 222 | 1667149 | 1667400 | + | NZ_CP012362.1 | Oblitimonas alkaliphila |
| 223 | 280461 | 280757 | + | NZ_CP047698.1 | Pseudomonas knackmussii |
| 224 | 2249615 | 2249911 | + | NZ_CP047698.1 | Pseudomonas knackmussii |
| 225 | 3751163 | 3751459 | + | NZ_CP047698.1 | Pseudomonas knackmussii |
| 226 | 2236065 | 2236361 | - | NZ_CP047698.1 | Pseudomonas knackmussii |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000913.3
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00665.28 | 0.87 | 61 | 213.0 | same-strand | Integrase core domain |
| 2 | PF13683.8 | 0.86 | 60 | 213 | same-strand | Integrase core domain |
| 3 | PF13333.8 | 0.73 | 51 | 213.0 | same-strand | Integrase core domain |
++ More..