* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LR134340.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF01381.24
|
0.67
|
2
|
1735.5
|
same-strand
|
Helix-turn-helix
|
2
|
PF13560.8
|
0.67
|
2
|
1735.5
|
same-strand
|
Helix-turn-helix domain
|
3
|
PF07151.14
|
0.67
|
2
|
1148
|
same-strand
|
Protein of unknown function (DUF1391)
|
4
|
PF14163.8
|
0.67
|
2
|
540
|
opposite-strand
|
Super-infection exclusion protein B
|
5
|
PF06630.13
|
0.67
|
2
|
452
|
same-strand
|
Enterobacterial exodeoxyribonuclease VIII
|
6
|
PF12684.9
|
0.67
|
2
|
452
|
same-strand
|
PDDEXK-like domain of unknown function (DUF3799)
|
7
|
PF03837.16
|
0.67
|
2
|
3045
|
same-strand
|
RecT family
|
8
|
PF06688.13
|
0.67
|
2
|
4098
|
same-strand
|
Protein of unknown function (DUF1187)
|
9
|
PF06806.14
|
0.67
|
2
|
4386
|
same-strand
|
Putative excisionase (DUF1233)
|
++ More..