* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_AP018795.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00586.26
|
1.0
|
4
|
2711.5
|
same-strand
|
AIR synthase related protein, N-terminal domain
|
2
|
PF02769.24
|
1.0
|
4
|
2711.5
|
same-strand
|
AIR synthase related protein, C-terminal domain
|
3
|
PF04608.15
|
1.0
|
4
|
2233.5
|
same-strand
|
Phosphatidylglycerophosphatase A
|
4
|
PF02464.19
|
1.0
|
4
|
1391.5
|
same-strand
|
Competence-damaged protein
|
5
|
PF00154.23
|
1.0
|
4
|
181.0
|
same-strand
|
recA bacterial DNA recombination protein
|
6
|
PF08423.13
|
1.0
|
4
|
181.0
|
same-strand
|
Rad51
|
7
|
PF01411.21
|
1.0
|
4
|
59.5
|
same-strand
|
tRNA synthetases class II (A)
|
8
|
PF02272.21
|
1.0
|
4
|
59.5
|
same-strand
|
DHHA1 domain
|
9
|
PF07973.16
|
1.0
|
4
|
59.5
|
same-strand
|
Threonyl and Alanyl tRNA synthetase second additional domain
|
++ More..