Result : P37723
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Osmotically-inducible lipoprotein B |
| NCBI Accession ID | AE006468.2 |
| Organism | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) |
| Left | 1799917 |
| Right | 1800135 |
| Strand | + |
| Nucleotide Sequence | ATGTTTATGACGAGCAAAAAAATGGCCGCTGCTGTGCTGGCAATCACCGTAGCAATGTCTCTGAGCGCCTGCTCAAACTGGTCCAAGCGCGATCGCAACACGGCTATTGGCGCAGGTGCGGGGGCGTTAGGCGGCGCAGTGTTAACGGACGGCAGTACATTAGGCACCCTGGGCGGCGCGGCGGTCGGCGGCGTGATTGGTCACCAGGTTGGAAAATAA |
| Sequence | MFMTSKKMAAAVLAITVAMSLSACSNWSKRDRNTAIGAGAGALGGAVLTDGSTLGTLGGAAVGGVIGHQVGK |
| Source of smORF | Swiss-Prot |
| Function | Provides resistance to osmotic stress. May be important for stationary-phase survival (By similarity). {ECO:0000250}. |
| Pubmed ID | 11677609 2436909 7920643 |
| Domain | CDD:182532 |
| Functional Category | Others |
| Uniprot ID | P37723 |
| ORF Length (Amino Acid) | 72 |
++ More..
| Conservation Analysis |
No. of Species: 168
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1799917 | 1800135 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 2 | 4311308 | 4311526 | + | NZ_CP053416.1 | Salmonella bongori |
| 3 | 2393287 | 2393505 | + | NZ_LR134340.1 | Escherichia marmotae |
| 4 | 704985 | 705203 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 5 | 1337394 | 1337612 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 6 | 1343110 | 1343328 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 7 | 1829343 | 1829561 | + | NC_013716.1 | Citrobacter rodentium ICC168 |
| 8 | 1843953 | 1844171 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 9 | 1391957 | 1392175 | - | NZ_AP014857.1 | Escherichia albertii |
| 10 | 459716 | 459934 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 11 | 2583086 | 2583304 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 12 | 2576279 | 2576497 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 13 | 2539207 | 2539425 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 14 | 4685351 | 4685569 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 15 | 2633317 | 2633535 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 16 | 1771111 | 1771329 | + | NZ_CP017279.1 | Enterobacter ludwigii |
| 17 | 865981 | 866199 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 18 | 2797669 | 2797887 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 19 | 1328326 | 1328544 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 20 | 3984017 | 3984235 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 21 | 2967513 | 2967731 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 22 | 1137624 | 1137842 | + | NZ_CP038469.1 | Citrobacter tructae |
| 23 | 4699623 | 4699841 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 24 | 370099 | 370317 | + | NZ_CP033744.1 | Citrobacter freundii |
| 25 | 1392628 | 1392846 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 26 | 3360217 | 3360414 | + | NZ_CP036175.1 | Klebsiella huaxiensis |
| 27 | 1910625 | 1910843 | + | NZ_LR134201.1 | Cedecea lapagei |
| 28 | 2167176 | 2167394 | - | NZ_CP023525.1 | Cedecea neteri |
| 29 | 2535650 | 2535835 | + | NZ_CP054058.1 | Scandinavium goeteborgense |
| 30 | 2549111 | 2549308 | + | NZ_CP045845.1 | Kluyvera intermedia |
| 31 | 2107744 | 2107962 | - | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 32 | 2170735 | 2170953 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 33 | 4134063 | 4134278 | + | NZ_CP042941.1 | Atlantibacter hermannii |
| 34 | 479797 | 480015 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 35 | 2522322 | 2522540 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 36 | 2666674 | 2666892 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 37 | 3276494 | 3276712 | - | NZ_CP020388.1 | Pluralibacter gergoviae |
| 38 | 2381248 | 2381463 | + | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 39 | 1698716 | 1698934 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 40 | 2382978 | 2383193 | + | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 41 | 927174 | 927392 | - | NZ_CP067057.1 | Rahnella aceris |
| 42 | 2544426 | 2544644 | + | NC_015968.1 | Enterobacter soli |
| 43 | 5497577 | 5497759 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 44 | 5404642 | 5404821 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 45 | 3056053 | 3056259 | - | NZ_CP023536.1 | Providencia alcalifaciens |
| 46 | 1070226 | 1070441 | - | NZ_CP027107.1 | Cronobacter sakazakii |
| 47 | 1841298 | 1841513 | - | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 48 | 4014581 | 4014778 | - | NZ_CP026047.1 | Raoultella planticola |
| 49 | 3314976 | 3315173 | + | NZ_CP050508.1 | Raoultella terrigena |
| 50 | 529024 | 529242 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 51 | 2590180 | 2590398 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 52 | 2989323 | 2989541 | - | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 53 | 2027082 | 2027300 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 54 | 3503061 | 3503282 | + | NZ_CP060111.1 | Klebsiella michiganensis |
| 55 | 3029972 | 3030169 | + | NZ_CP041247.1 | Raoultella electrica |
| 56 | 2223559 | 2223756 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 57 | 3209429 | 3209614 | + | NZ_CP046672.1 | Raoultella ornithinolytica |
| 58 | 4963143 | 4963322 | + | NZ_CP011254.1 | Serratia fonticola |
| 59 | 2055637 | 2055855 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 60 | 2974771 | 2974989 | + | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 61 | 2233838 | 2234056 | - | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 62 | 3161094 | 3161312 | + | NZ_CP054254.1 | Klebsiella variicola |
| 63 | 2239626 | 2239844 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 64 | 2066690 | 2066905 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 65 | 1927800 | 1928009 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 66 | 2321395 | 2321610 | + | NZ_CP061511.1 | Mixta calida |
| 67 | 2423123 | 2423338 | + | NZ_CP026377.1 | Mixta gaviniae |
| 68 | 2667371 | 2667589 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 69 | 2222563 | 2222778 | - | NC_017554.1 | Pantoea ananatis PA13 |
| 70 | 3561202 | 3561417 | - | NZ_CP019706.1 | Pantoea alhagi |
| 71 | 4120149 | 4120325 | - | NZ_CP007230.1 | Yersinia similis |
| 72 | 1837809 | 1838030 | - | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 73 | 1963966 | 1964175 | - | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 74 | 4081510 | 4081725 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 75 | 585849 | 586064 | + | NZ_CP049115.1 | Pantoea stewartii |
| 76 | 2134711 | 2134926 | + | NZ_CP034148.1 | Pantoea agglomerans |
| 77 | 1939250 | 1939465 | - | NZ_CP045720.1 | Pantoea eucalypti |
| 78 | 1921730 | 1921945 | - | NZ_CP038853.1 | Pantoea vagans |
| 79 | 2314931 | 2315146 | + | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 80 | 3534740 | 3534916 | - | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 81 | 1612675 | 1612893 | + | NZ_CP031123.2 | Providencia huaxiensis |
| 82 | 2070614 | 2070832 | + | NZ_LN907827.1 | Erwinia gerundensis |
| 83 | 1962409 | 1962624 | + | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 84 | 1831923 | 1832132 | + | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 85 | 1640139 | 1640354 | - | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 86 | 4129628 | 4129846 | + | NZ_CP065640.1 | Serratia rubidaea |
| 87 | 3889313 | 3889525 | - | NZ_CP065640.1 | Serratia rubidaea |
| 88 | 2845839 | 2846057 | + | NZ_LT906479.1 | Serratia ficaria |
| 89 | 2570552 | 2570737 | - | NZ_LT906479.1 | Serratia ficaria |
| 90 | 2854395 | 2854613 | + | NZ_CP048784.1 | Serratia liquefaciens |
| 91 | 2507112 | 2507297 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 92 | 2891402 | 2891620 | + | NZ_LR134494.1 | Serratia quinivorans |
| 93 | 2564164 | 2564349 | - | NZ_LR134494.1 | Serratia quinivorans |
| 94 | 2843183 | 2843401 | + | NC_015567.1 | Serratia plymuthica AS9 |
| 95 | 2248885 | 2249103 | - | NZ_CP048796.1 | Providencia vermicola |
| 96 | 2178215 | 2178397 | - | NZ_LS483422.1 | Providencia heimbachae |
| 97 | 2676234 | 2676452 | + | NZ_CP050150.1 | Hafnia alvei |
| 98 | 1515432 | 1515647 | + | NZ_CP028271.1 | Mixta intestinalis |
| 99 | 2287679 | 2287897 | - | NZ_CP071320.1 | Serratia ureilytica |
| 100 | 2620873 | 2621052 | + | NZ_CP071320.1 | Serratia ureilytica |
| 101 | 2106857 | 2107075 | + | NZ_CP016948.1 | Serratia surfactantfaciens |
| 102 | 1797983 | 1798159 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 103 | 2799534 | 2799752 | + | NZ_CP038662.1 | Serratia nematodiphila |
| 104 | 2507483 | 2507659 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 105 | 2684268 | 2684450 | + | NZ_CP021376.1 | Oceanisphaera avium |
| 106 | 2091252 | 2091443 | + | NZ_CP009159.1 | Actinobacillus suis ATCC 33415 |
| 107 | 2029152 | 2029343 | - | NZ_CP007715.1 | Actinobacillus equuli subsp. equuli |
| 108 | 1720310 | 1720528 | + | NZ_AP018150.1 | Mycoavidus cysteinexigens |
| 109 | 3264343 | 3264570 | + | NZ_AP019312.1 | Chromobacterium haemolyticum |
| 110 | 859579 | 859782 | + | NZ_CP031699.1 | Neisseria animalis |
| 111 | 1767380 | 1767556 | - | NZ_CP039887.1 | Neisseria subflava |
| 112 | 1973602 | 1973778 | + | NZ_CP039886.1 | Neisseria flavescens |
| 113 | 2121889 | 2122104 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 114 | 3490982 | 3491203 | + | NC_005085.1 | Chromobacterium violaceum ATCC 12472 |
| 115 | 2780804 | 2781013 | - | NZ_CP060414.1 | Neisseria musculi |
| 116 | 1070906 | 1071097 | + | NZ_LR134533.1 | Neisseria weaveri |
| 117 | 3285962 | 3286183 | - | NZ_CP026364.1 | Proteus hauseri |
| 118 | 4759353 | 4759538 | + | NZ_CP036401.1 | Massilia albidiflava |
| 119 | 194225 | 194446 | + | NZ_CP029495.1 | Chromobacterium phragmitis |
| 120 | 4063335 | 4063529 | + | NZ_HG322949.1 | Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 |
| 121 | 6973535 | 6973735 | - | NZ_CP040017.1 | Massilia umbonata |
| 122 | 2455750 | 2455947 | - | NZ_CP059571.1 | Neisseria bacilliformis |
| 123 | 271865 | 272071 | + | NZ_LT906434.1 | Neisseria zoodegmatis |
| 124 | 369895 | 370110 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 125 | 2870945 | 2871127 | + | NZ_CP029736.1 | Providencia rettgeri |
| 126 | 990989 | 991171 | - | NZ_CP013737.1 | Herbaspirillum rubrisubalbicans M1 |
| 127 | 1175394 | 1175576 | + | NZ_CP013737.1 | Herbaspirillum rubrisubalbicans M1 |
| 128 | 1118861 | 1119076 | - | NZ_CP037993.1 | Herbaspirillum huttiense |
| 129 | 1302560 | 1302751 | + | NZ_CP037993.1 | Herbaspirillum huttiense |
| 130 | 1181556 | 1181738 | - | NZ_CP011930.1 | Herbaspirillum seropedicae |
| 131 | 1364254 | 1364445 | + | NZ_CP011930.1 | Herbaspirillum seropedicae |
| 132 | 2026504 | 2026680 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 133 | 2230425 | 2230643 | - | NZ_CP023422.1 | Janthinobacterium svalbardensis |
| 134 | 2827450 | 2827647 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 135 | 2493265 | 2493480 | + | NZ_CP018845.1 | Herbaspirillum robiniae |
| 136 | 2356968 | 2357144 | - | NZ_CP018845.1 | Herbaspirillum robiniae |
| 137 | 2191056 | 2191274 | - | NZ_CP048832.1 | Janthinobacterium lividum |
| 138 | 3431021 | 3431230 | - | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 139 | 3152690 | 3152908 | - | NZ_CP023706.1 | Edwardsiella tarda |
| 140 | 5988702 | 5988920 | - | NZ_CP041185.1 | Janthinobacterium tructae |
| 141 | 1361449 | 1361670 | + | NC_010554.1 | Proteus mirabilis HI4320 |
| 142 | 1988468 | 1988644 | - | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 143 | 582186 | 582401 | - | NZ_CP009787.1 | Yersinia rohdei |
| 144 | 2136133 | 2136348 | + | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 145 | 2381363 | 2381578 | + | NZ_CP043727.1 | Yersinia canariae |
| 146 | 1914845 | 1915060 | + | NZ_CP032487.1 | Yersinia hibernica |
| 147 | 1763523 | 1763744 | - | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 148 | 2621898 | 2622125 | + | NZ_CP064338.1 | Schlegelella thermodepolymerans |
| 149 | 4943810 | 4943986 | - | NZ_CP009460.1 | Dickeya fangzhongdai |
| 150 | 510440 | 510655 | + | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 151 | 2256576 | 2256755 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 152 | 2203051 | 2203266 | - | NZ_CP046293.1 | Yersinia intermedia |
| 153 | 2261377 | 2261559 | + | NZ_CP021377.1 | Oceanisphaera profunda |
| 154 | 1783728 | 1783904 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 155 | 2850278 | 2850454 | + | NC_014500.1 | Dickeya dadantii 3937 |
| 156 | 518286 | 518489 | - | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
| 157 | 103893 | 104069 | + | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 158 | 2381251 | 2381427 | - | NZ_CP018139.1 | Halomonas aestuarii |
| 159 | 1701807 | 1702034 | + | NZ_CP041335.1 | Chitinolyticbacter meiyuanensis |
| 160 | 1624738 | 1624923 | - | NZ_CP054840.1 | Acidovorax antarcticus |
| 161 | 3524958 | 3525164 | + | NZ_CP013232.1 | Collimonas fungivorans |
| 162 | 2793207 | 2793383 | + | NZ_CP031560.1 | Dickeya dianthicola |
| 163 | 2720321 | 2720497 | + | NZ_LT615367.1 | Dickeya aquatica |
| 164 | 2781172 | 2781348 | + | NZ_CP025799.1 | Dickeya zeae |
| 165 | 1136504 | 1136725 | + | NZ_CP043146.1 | Bordetella holmesii |
| 166 | 2857648 | 2857842 | - | NZ_CP010554.1 | Rugosibacter aromaticivorans |
| 167 | 1977264 | 1977452 | - | NC_012968.1 | Methylotenera mobilis JLW8 |
| 168 | 1350542 | 1350757 | - | NZ_CP013459.1 | Burkholderia stagnalis |
| 169 | 2138807 | 2138998 | - | NZ_AP022853.1 | Sulfurimicrobium lacus |
| 170 | 1834699 | 1834881 | + | NZ_CP047165.1 | Pelistega ratti |
| 171 | 370901 | 371077 | + | NC_012969.1 | Methylovorus glucosetrophus SIP3-4 |
| 172 | 1034215 | 1034397 | + | NZ_LR134326.1 | Bordetella bronchiseptica |
| 173 | 3180455 | 3180637 | - | NZ_AP019378.1 | Bordetella parapertussis |
| 174 | 2076623 | 2076835 | + | NZ_CP009795.1 | Burkholderia dolosa AU0158 |
| 175 | 2163370 | 2163588 | - | NZ_CP013236.1 | Collimonas pratensis |
| 176 | 2446392 | 2446583 | - | NZ_CP059560.1 | Aromatoleum petrolei |
| 177 | 3316402 | 3316614 | + | NC_007951.1 | Paraburkholderia xenovorans LB400 |
| 178 | 2173037 | 2173255 | + | NZ_CP015839.1 | Marinobacterium aestuarii |
| 179 | 3052249 | 3052464 | + | NZ_CP025682.1 | Azoarcus pumilus |
| 180 | 2057462 | 2057656 | + | NZ_CP059467.1 | Aromatoleum bremense |
| 181 | 1401764 | 1401952 | - | NZ_CP009832.1 | Burkholderia multivorans ATCC BAA-247 |
| 182 | 1800663 | 1800878 | - | NZ_CP022987.1 | Pusillimonas thiosulfatoxidans |
| 183 | 1936900 | 1937094 | + | NC_006513.1 | Aromatoleum aromaticum EbN1 |
| 184 | 738569 | 738745 | - | NZ_LT671418.1 | Herminiimonas arsenitoxidans |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_003197.2
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01253.24 | 0.68 | 114 | 115 | opposite-strand | Translation initiation factor SUI1 |
| 2 | PF00215.26 | 0.68 | 114 | 442 | opposite-strand | Orotidine 5'-phosphate decarboxylase / HUMPS family |
| 3 | PF18073.3 | 0.65 | 110 | 1366 | opposite-strand | Rubredoxin metal binding domain |
++ More..