Result : P37549
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Protein SspF |
| NCBI Accession ID | X00847.1 |
| Organism | Bacillus subtilis (strain 168) |
| Left | 176 |
| Right | 361 |
| Strand | + |
| Nucleotide Sequence | TTGGGCAGACGTCGTGGAGTTATGTCAGATGAGTTTAAATATGAGCTGGCTAAAGACCTTGGTTTTTATGACACAGTAAAAAATGGAGGCTGGGGTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAA |
| Sequence | MGRRRGVMSDEFKYELAKDLGFYDTVKNGGWGEIRARDAGNMVKRAIEIAEQQMAQNQNNR |
| Source of smORF | Swiss-Prot |
| Function | May play some important role in either sporulation or the dormant spore. |
| Pubmed ID | 6205155 7584024 9384377 |
| Domain | CDD:395207 |
| Functional Category | DNA-binding |
| Uniprot ID | P37549 |
| ORF Length (Amino Acid) | 61 |
++ More..
| Conservation Analysis |
No. of Species: 162
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 53183 | 53368 | + | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 2 | 52869 | 53054 | + | NZ_CP034943.1 | Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 |
| 3 | 189018 | 189203 | + | NZ_CP033052.1 | Bacillus vallismortis |
| 4 | 53060 | 53245 | + | NZ_CP048852.1 | Bacillus tequilensis |
| 5 | 33442 | 33627 | + | NZ_CP013984.1 | Bacillus inaquosorum |
| 6 | 52877 | 53062 | + | NZ_CP051464.1 | Bacillus mojavensis |
| 7 | 1956360 | 1956545 | - | NZ_CP029364.1 | Bacillus halotolerans |
| 8 | 32061 | 32246 | + | NZ_CP011150.1 | Bacillus altitudinis |
| 9 | 1493227 | 1493412 | - | NZ_CP043404.1 | Bacillus safensis |
| 10 | 3877079 | 3877267 | - | NZ_CP011937.1 | Bacillus velezensis |
| 11 | 54276 | 54464 | + | NZ_CP053376.1 | Bacillus amyloliquefaciens |
| 12 | 60575 | 60760 | + | NZ_LT603683.1 | Bacillus glycinifermentans |
| 13 | 1576283 | 1576468 | - | NZ_CP017786.1 | Bacillus xiamenensis |
| 14 | 57675 | 57860 | + | NC_006270.3 | Bacillus licheniformis DSM 13 = ATCC 14580 |
| 15 | 84293 | 84478 | + | NZ_CP023665.1 | Bacillus paralicheniformis |
| 16 | 4135695 | 4135877 | - | NZ_CP016020.1 | Bacillus weihaiensis |
| 17 | 1082937 | 1083125 | + | NZ_CP017703.1 | Aeribacillus pallidus |
| 18 | 50581 | 50763 | + | NZ_CP065425.1 | Heyndrickxia vini |
| 19 | 50369 | 50554 | + | NZ_CP024848.1 | Oceanobacillus zhaokaii |
| 20 | 77286 | 77471 | + | NC_002570.2 | Alkalihalobacillus halodurans C-125 |
| 21 | 61838 | 62020 | + | NC_014829.1 | Evansella cellulosilytica DSM 2522 |
| 22 | 4276966 | 4277148 | + | NZ_CP033433.1 | Cohnella candidum |
| 23 | 1655585 | 1655767 | + | NZ_CP021434.1 | Tumebacillus avium |
| 24 | 1533502 | 1533681 | + | NZ_CP063356.1 | Anaerobacillus isosaccharinicus |
| 25 | 65185 | 65364 | + | NZ_CP041666.1 | Radiobacillus deserti |
| 26 | 188798 | 188983 | + | NC_013205.1 | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
| 27 | 47725 | 47904 | + | NC_007530.2 | Bacillus anthracis str. 'Ames Ancestor' |
| 28 | 47373 | 47552 | + | NZ_CP064875.1 | Bacillus toyonensis |
| 29 | 47345 | 47524 | + | NZ_CP032365.1 | Bacillus wiedmannii |
| 30 | 58705 | 58890 | + | NC_013791.2 | Alkalihalobacillus pseudofirmus OF4 |
| 31 | 49633 | 49815 | + | NZ_LS483476.1 | Lederbergia lentus |
| 32 | 5072003 | 5072182 | - | NZ_CP040336.1 | Bacillus luti |
| 33 | 54629 | 54811 | + | NZ_AP019400.1 | Cohnella abietis |
| 34 | 56591 | 56758 | + | NC_014098.1 | Kyrpidia tusciae DSM 2912 |
| 35 | 2237626 | 2237814 | + | NZ_CP009709.1 | Weizmannia coagulans DSM 1 = ATCC 7050 |
| 36 | 1840966 | 1841121 | - | NZ_CP041305.1 | Cytobacillus ciccensis |
| 37 | 63428 | 63613 | + | NZ_CP017962.1 | Virgibacillus halodenitrificans |
| 38 | 2213419 | 2213601 | + | NZ_CP017705.1 | Brevibacillus laterosporus DSM 25 |
| 39 | 47622 | 47801 | + | NC_011725.1 | Bacillus cereus B4264 |
| 40 | 271049 | 271228 | - | NZ_AP017312.1 | Aneurinibacillus soli |
| 41 | 54571 | 54756 | + | NZ_CP012024.1 | Bacillus smithii |
| 42 | 57039 | 57227 | + | NZ_CP024955.1 | Kyrpidia spormannii |
| 43 | 4489164 | 4489322 | - | NZ_CP022657.1 | Tumebacillus algifaecis |
| 44 | 2262337 | 2262534 | - | NC_013921.1 | Thermoanaerobacter italicus Ab9 |
| 45 | 2144889 | 2145086 | - | NC_014209.1 | Thermoanaerobacter mathranii subsp. mathranii str. A3 |
| 46 | 48058 | 48237 | + | NZ_CP024109.1 | Bacillus cytotoxicus |
| 47 | 2313221 | 2313376 | + | NZ_CP045298.1 | Paenibacillus brasilensis |
| 48 | 5621963 | 5622118 | - | NZ_CP020028.1 | Paenibacillus kribbensis |
| 49 | 4650713 | 4650874 | + | NZ_CP018866.1 | Sutcliffiella cohnii |
| 50 | 1149241 | 1149423 | - | NZ_CP022315.1 | Virgibacillus phasianinus |
| 51 | 1633889 | 1634044 | + | NC_016641.1 | Paenibacillus terrae HPL-003 |
| 52 | 3821673 | 3821825 | + | NZ_CP054614.1 | Paenibacillus barcinonensis |
| 53 | 126037 | 126216 | + | NZ_LR134338.1 | Brevibacillus brevis |
| 54 | 897323 | 897481 | - | NZ_CP043611.1 | Paenibacillus antarcticus |
| 55 | 137860 | 138042 | - | NZ_CP039710.1 | Thermoactinomyces vulgaris |
| 56 | 684052 | 684207 | + | NZ_CP026520.1 | Paenibacillus chitinolyticus |
| 57 | 62283 | 62465 | + | NZ_CP029797.1 | Paraliobacillus zengyii |
| 58 | 1513301 | 1513456 | - | NZ_CP011388.1 | Paenibacillus swuensis |
| 59 | 52707 | 52862 | + | NZ_CP031223.1 | Psychrobacillus glaciei |
| 60 | 53409 | 53564 | + | NC_004193.1 | Oceanobacillus iheyensis HTE831 |
| 61 | 164829 | 165011 | + | NZ_CP053989.1 | Niallia circulans |
| 62 | 2182860 | 2183057 | - | NZ_CP009170.1 | Thermoanaerobacter kivui |
| 63 | 2592101 | 2592298 | - | NC_015958.1 | Thermoanaerobacter wiegelii Rt8.B1 |
| 64 | 138659 | 138838 | - | NZ_CP020772.1 | Halobacillus mangrovi |
| 65 | 2438423 | 2438620 | - | NC_003869.1 | Caldanaerobacter subterraneus subsp. tengcongensis MB4 |
| 66 | 5345522 | 5345695 | - | NZ_CP045293.1 | Paenibacillus guangzhouensis |
| 67 | 68417 | 68608 | + | NZ_AP021853.1 | Sporolactobacillus terrae |
| 68 | 134627 | 134809 | - | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 69 | 202584 | 202781 | + | NC_014964.1 | Thermoanaerobacter brockii subsp. finnii Ako-1 |
| 70 | 35829 | 35987 | + | NZ_CP034346.1 | Paenibacillus lutimineralis |
| 71 | 563815 | 563988 | - | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 72 | 3197382 | 3197543 | - | NZ_CP035492.1 | Paenibacillus protaetiae |
| 73 | 983342 | 983494 | - | NZ_CP034248.1 | Paenibacillus lentus |
| 74 | 42156 | 42314 | + | NZ_CP019699.1 | Novibacillus thermophilus |
| 75 | 2168082 | 2168258 | - | NZ_CP008876.1 | Terribacillus goriensis |
| 76 | 431914 | 432072 | - | NZ_CP070511.1 | Parageobacillus toebii |
| 77 | 62722 | 62907 | + | NZ_CP009416.1 | Jeotgalibacillus malaysiensis |
| 78 | 1461902 | 1462081 | - | NZ_CP018622.1 | Virgibacillus dokdonensis |
| 79 | 3184041 | 3184199 | + | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 80 | 451638 | 451817 | - | NZ_CP026363.1 | Brevibacillus agri |
| 81 | 93519 | 93695 | + | NZ_CP048104.1 | Kroppenstedtia pulmonis |
| 82 | 112189 | 112341 | + | NZ_CP048103.1 | Kroppenstedtia eburnea |
| 83 | 199841 | 199999 | + | NZ_CP019659.1 | Paenibacillus larvae subsp. larvae |
| 84 | 2624873 | 2625040 | - | NZ_CP013862.1 | Lentibacillus amyloliquefaciens |
| 85 | 61694 | 61876 | + | NC_017668.1 | Halobacillus halophilus DSM 2266 |
| 86 | 3178184 | 3178363 | - | NZ_CP014342.1 | Geobacillus subterraneus |
| 87 | 54814 | 54984 | + | NZ_CP024035.1 | Priestia aryabhattai |
| 88 | 50645 | 50800 | + | NZ_CP023704.1 | Caldibacillus thermoamylovorans |
| 89 | 3952642 | 3952809 | - | NC_019897.1 | Thermobacillus composti KWC4 |
| 90 | 2344806 | 2344985 | - | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 91 | 38442 | 38594 | + | NZ_CP009286.1 | Paenibacillus stellifer |
| 92 | 3179271 | 3179429 | - | NZ_CP016809.1 | Paenibacillus ihbetae |
| 93 | 293417 | 293575 | + | NZ_CP034235.1 | Paenibacillus psychroresistens |
| 94 | 51358 | 51537 | + | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 95 | 2744958 | 2745137 | + | NZ_CP061470.1 | Geobacillus zalihae |
| 96 | 4861418 | 4861594 | - | NC_016627.1 | Acetivibrio clariflavus DSM 19732 |
| 97 | 34584 | 34736 | + | NZ_CP009287.1 | Paenibacillus graminis |
| 98 | 7096550 | 7096702 | + | NZ_CP021780.1 | Paenibacillus donghaensis |
| 99 | 255116 | 255265 | - | NZ_CP022437.1 | Virgibacillus necropolis |
| 100 | 221350 | 221529 | - | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 101 | 4632901 | 4633077 | - | NZ_CP014616.1 | Sporosarcina psychrophila |
| 102 | 53132 | 53287 | + | NZ_CP042593.1 | Bacillus dafuensis |
| 103 | 1906982 | 1907137 | + | NZ_CP068595.1 | Paenibacillus sonchi |
| 104 | 34738 | 34893 | + | NZ_LN831776.1 | Paenibacillus riograndensis SBR5 |
| 105 | 55991 | 56161 | + | NC_022524.1 | Bacillus infantis NRRL B-14911 |
| 106 | 1947135 | 1947284 | + | NZ_CP048429.1 | Paenibacillus jilunlii |
| 107 | 4143452 | 4143607 | - | NZ_CP014167.1 | Paenibacillus yonginensis |
| 108 | 3746647 | 3746802 | - | NZ_CP045295.1 | Paenibacillus cellulositrophicus |
| 109 | 215075 | 215236 | + | NC_014410.1 | Thermoanaerobacterium thermosaccharolyticum DSM 571 |
| 110 | 2271412 | 2271591 | + | NZ_CP031092.1 | Salicibibacter kimchii |
| 111 | 2897967 | 2898149 | - | NC_020134.1 | Thermoclostridium stercorarium subsp. stercorarium DSM 8532 |
| 112 | 1796806 | 1796961 | - | NZ_CP015108.1 | Sporosarcina ureae |
| 113 | 2493383 | 2493559 | + | NZ_CP030926.1 | Peribacillus butanolivorans |
| 114 | 2520196 | 2520372 | - | NZ_CP017704.1 | Peribacillus simplex NBRC 15720 = DSM 1321 |
| 115 | 2779072 | 2779248 | - | NZ_CP068053.1 | Peribacillus psychrosaccharolyticus |
| 116 | 47234 | 47386 | + | NZ_CP009428.1 | Paenibacillus odorifer |
| 117 | 2166211 | 2166390 | - | NZ_CP035485.1 | Salicibibacter halophilus |
| 118 | 178001 | 178186 | - | NZ_CP017560.1 | Sporosarcina ureilytica |
| 119 | 73510 | 73665 | + | NZ_CP034118.1 | Staphylospora marina |
| 120 | 4780526 | 4780687 | - | NZ_CP010820.1 | Lysinibacillus fusiformis |
| 121 | 74411 | 74572 | + | NZ_CP006837.1 | Lysinibacillus varians |
| 122 | 4647221 | 4647382 | - | NZ_CP019980.1 | Lysinibacillus sphaericus |
| 123 | 180413 | 180574 | + | NC_015555.1 | Thermoanaerobacterium xylanolyticum LX-11 |
| 124 | 2447988 | 2448149 | - | NZ_CP047602.1 | Thermoanaerobacterium aotearoense |
| 125 | 2306089 | 2306247 | + | NZ_CP011058.1 | Paenibacillus beijingensis |
| 126 | 41367 | 41549 | + | NZ_CP015378.1 | Fictibacillus phosphorivorans |
| 127 | 1700428 | 1700607 | - | NZ_CP022121.1 | Dehalobacterium formicoaceticum |
| 128 | 181815 | 181979 | + | NC_010718.1 | Natranaerobius thermophilus JW/NM-WN-LF |
| 129 | 4045641 | 4045811 | - | NC_011898.1 | Ruminiclostridium cellulolyticum H10 |
| 130 | 3547194 | 3547346 | - | NZ_CP016502.1 | Acetivibrio thermocellus DSM 2360 |
| 131 | 756636 | 756815 | - | NZ_CP017237.1 | Moorella thermoacetica |
| 132 | 2735898 | 2736083 | - | NZ_CP038012.1 | Sporosarcina pasteurii |
| 133 | 3561136 | 3561288 | - | NZ_CP025197.1 | Acetivibrio saccincola |
| 134 | 3852475 | 3852663 | + | NZ_CP038015.1 | Paenisporosarcina antarctica |
| 135 | 1516611 | 1516766 | - | NC_015949.1 | Caldicellulosiruptor lactoaceticus 6A |
| 136 | 951747 | 951902 | + | NC_014721.1 | Caldicellulosiruptor kristjanssonii I77R1B |
| 137 | 4795724 | 4795894 | - | NZ_CP061336.1 | Ruminiclostridium herbifermentans |
| 138 | 1599317 | 1599472 | - | NC_014657.1 | Caldicellulosiruptor owensensis OL |
| 139 | 1709221 | 1709376 | - | NC_014392.1 | Caldicellulosiruptor obsidiansis OB47 |
| 140 | 1102922 | 1103077 | + | NC_014720.1 | Caldicellulosiruptor kronotskyensis 2002 |
| 141 | 1864374 | 1864529 | - | NC_012034.1 | Caldicellulosiruptor bescii DSM 6725 |
| 142 | 1843167 | 1843322 | - | NZ_CP034791.1 | Caldicellulosiruptor changbaiensis |
| 143 | 2448687 | 2448842 | - | NC_009437.1 | Caldicellulosiruptor saccharolyticus DSM 8903 |
| 144 | 2038831 | 2039004 | - | NZ_CP022983.1 | Cytobacillus kochii |
| 145 | 1408676 | 1408861 | - | NZ_AP014924.1 | Limnochorda pilosa |
| 146 | 993482 | 993637 | + | NC_014652.1 | Caldicellulosiruptor hydrothermalis 108 |
| 147 | 3125922 | 3126101 | + | NC_018017.1 | Desulfitobacterium dehalogenans ATCC 51507 |
| 148 | 1161002 | 1161190 | + | NZ_CP059066.1 | Koleobacter methoxysyntrophicus |
| 149 | 2577025 | 2577195 | - | NC_015519.1 | Tepidanaerobacter acetatoxydans Re1 |
| 150 | 1998501 | 1998680 | - | NC_010337.2 | Heliomicrobium modesticaldum Ice1 |
| 151 | 1098894 | 1099085 | - | NC_014220.1 | Syntrophothermus lipocalidus DSM 12680 |
| 152 | 2644891 | 2645070 | + | NC_019903.1 | Desulfitobacterium dichloroeliminans LMG P-21439 |
| 153 | 929280 | 929459 | + | NC_019978.1 | Halobacteroides halobius DSM 5150 |
| 154 | 3959824 | 3960003 | + | NC_011830.1 | Desulfitobacterium hafniense DCB-2 |
| 155 | 2039713 | 2039874 | - | NC_011899.1 | Halothermothrix orenii H 168 |
| 156 | 2202017 | 2202211 | - | NC_014377.1 | Thermosediminibacter oceani DSM 16646 |
| 157 | 1010015 | 1010185 | - | NC_014378.1 | Acetohalobium arabaticum DSM 5501 |
| 158 | 2346348 | 2346500 | + | NZ_CP025286.1 | Ethanoligenens harbinense YUAN-3 |
| 159 | 1506044 | 1506235 | + | NC_018870.1 | Thermacetogenium phaeum DSM 12270 |
| 160 | 3057155 | 3057331 | - | NZ_CP045798.1 | Thermoanaerosceptrum fracticalcis |
| 161 | 3094400 | 3094573 | + | NC_021184.1 | Desulfoscipio gibsoniae DSM 7213 |
| 162 | 2210359 | 2210517 | - | NC_015520.1 | Mahella australiensis 50-1 BON |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000964.3
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF13331.8 | 0.69 | 111 | 2537 | same-strand | Domain of unknown function (DUF4093) |
| 2 | PF00398.22 | 0.7 | 113 | 1664 | same-strand | Ribosomal RNA adenine dimethylase |
| 3 | PF05582.14 | 0.62 | 101 | 672 | same-strand | YabG peptidase U57 |
| 4 | PF06257.13 | 0.73 | 118 | 159.5 | same-strand | Biofilm formation stimulator VEG |
| 5 | PF00288.28 | 0.73 | 118 | 190.0 | same-strand | GHMP kinases N terminal domain |
| 6 | PF08544.15 | 0.65 | 106 | 195.5 | same-strand | GHMP kinases C terminal |
| 7 | PF09182.12 | 0.72 | 116 | 1134.0 | same-strand | Bacterial purine repressor, N-terminal |
| 8 | PF00156.29 | 0.62 | 101 | 1125 | same-strand | Phosphoribosyl transferase domain |
| 9 | PF04026.14 | 0.69 | 111 | 2500 | same-strand | SpoVG |
| 10 | PF00132.26 | 0.61 | 99 | 2981 | same-strand | Bacterial transferase hexapeptide (six repeats) |
| 11 | PF00483.25 | 0.62 | 100 | 2974.5 | same-strand | Nucleotidyl transferase |
| 12 | PF14602.8 | 0.6 | 98 | 2982.0 | same-strand | Hexapeptide repeat of succinyl-transferase |
++ More..