Result : P37057
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Prophage late control protein OgrK (Prophage P2 OGR protein) |
| NCBI Accession ID | M81463.1 |
| Organism | Escherichia coli (strain K12) |
| Left | 99 |
| Right | 317 |
| Strand | + |
| Nucleotide Sequence | ATGTTTCATTGTCCTTTATGCCAGCATGCCGCACATGCGCGTACAAGCCGCTATATCACTGACACGACAAAAGAGCGTTATCATCAGTGCCAGAACGTGAATTGCAGCGCCACGTTCATCACTTATGAGTCGGTACAGCGATACATCGTGAAGCCGGGAGAAGTCCACGCCGTAAGACCGCACCCGTTGCCGTCAGGGCAGCAAATTATGTGGATGTAA |
| Sequence | MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHVVRPHPLPSGQQIMWM |
| Source of smORF | Swiss-Prot |
| Function | Cryptic version of the phage P2 OGR protein which acts as an activator of P2 late transcription. |
| Pubmed ID | 1597424 1597423 9097040 9278503 16738553 |
| Domain | CDD:418614 |
| Functional Category | Others |
| Uniprot ID | P37057 |
| ORF Length (Amino Acid) | 72 |
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| Conservation Analysis |
No. of Species: 78
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2167302 | 2167520 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 2 | 25686 | 25904 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 3 | 3054275 | 3054493 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 4 | 5299002 | 5299220 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 5 | 1844406 | 1844627 | - | NZ_CP023529.1 | Lelliottia amnigena |
| 6 | 963567 | 963788 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 7 | 3793316 | 3793534 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 8 | 4308113 | 4308307 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 9 | 2056584 | 2056784 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 10 | 4644923 | 4645141 | - | NZ_CP015113.1 | Kosakonia radicincitans |
| 11 | 2711639 | 2711860 | - | NZ_CP009756.1 | Enterobacter cloacae |
| 12 | 4014206 | 4014424 | - | NZ_CP027986.1 | Enterobacter sichuanensis |
| 13 | 3095543 | 3095761 | + | NZ_CP044098.1 | Citrobacter portucalensis |
| 14 | 4218696 | 4218917 | + | NZ_CP044098.1 | Citrobacter portucalensis |
| 15 | 1778105 | 1778323 | + | NZ_LT906479.1 | Serratia ficaria |
| 16 | 971707 | 971925 | - | NZ_LT906479.1 | Serratia ficaria |
| 17 | 3633652 | 3633870 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 18 | 4209631 | 4209849 | - | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 19 | 4787746 | 4787949 | - | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 20 | 685087 | 685305 | + | NZ_CP050508.1 | Raoultella terrigena |
| 21 | 4331769 | 4331987 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 22 | 3456620 | 3456838 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 23 | 2616647 | 2616868 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 24 | 4040869 | 4041069 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 25 | 3212203 | 3212421 | - | NZ_CP016043.1 | Edwardsiella hoshinae |
| 26 | 2313199 | 2313417 | + | NZ_CP015749.1 | Pectobacterium parmentieri |
| 27 | 3926740 | 3926958 | + | NZ_CP011254.1 | Serratia fonticola |
| 28 | 2983936 | 2984154 | - | NZ_CP011254.1 | Serratia fonticola |
| 29 | 4150515 | 4150733 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 30 | 1714706 | 1714924 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 31 | 1153214 | 1153432 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 32 | 376396 | 376614 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 33 | 3104856 | 3105074 | - | NZ_CP043727.1 | Yersinia canariae |
| 34 | 4084840 | 4085058 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 35 | 1808307 | 1808525 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 36 | 2110966 | 2111184 | + | NZ_LR134494.1 | Serratia quinivorans |
| 37 | 875205 | 875423 | - | NZ_LR134494.1 | Serratia quinivorans |
| 38 | 2003789 | 2004010 | - | NZ_LR134494.1 | Serratia quinivorans |
| 39 | 3932607 | 3932825 | - | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 40 | 4978615 | 4978833 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 41 | 1773265 | 1773489 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 42 | 4282139 | 4282360 | + | NZ_CP067057.1 | Rahnella aceris |
| 43 | 3727596 | 3727814 | + | NZ_CP034938.1 | Pectobacterium odoriferum |
| 44 | 827570 | 827788 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 45 | 2018140 | 2018358 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 46 | 3258875 | 3259075 | + | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 47 | 2480209 | 2480424 | + | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 48 | 2752733 | 2752948 | + | NZ_CP011118.1 | Yersinia enterocolitica |
| 49 | 4172985 | 4173212 | + | NZ_CP071320.1 | Serratia ureilytica |
| 50 | 644827 | 645045 | + | NZ_CP011078.1 | Yersinia ruckeri |
| 51 | 3160264 | 3160479 | - | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 52 | 878471 | 878689 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 53 | 2207796 | 2208011 | + | NZ_CP032487.1 | Yersinia hibernica |
| 54 | 199678 | 199905 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 55 | 5048310 | 5048528 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 56 | 4359774 | 4359974 | + | NZ_CP017279.1 | Enterobacter ludwigii |
| 57 | 870841 | 871068 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 58 | 2031091 | 2031309 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 59 | 197493 | 197711 | + | NZ_CP023536.1 | Providencia alcalifaciens |
| 60 | 2200923 | 2201141 | - | NZ_LN907827.1 | Erwinia gerundensis |
| 61 | 716689 | 716907 | + | NC_017554.1 | Pantoea ananatis PA13 |
| 62 | 2490158 | 2490352 | + | NC_012880.1 | Musicola paradisiaca Ech703 |
| 63 | 4163053 | 4163256 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 64 | 686659 | 686877 | + | NZ_CP054254.1 | Klebsiella variicola |
| 65 | 1983185 | 1983394 | + | NZ_CP065534.1 | Lonsdalea populi |
| 66 | 3229074 | 3229292 | - | NZ_CP065534.1 | Lonsdalea populi |
| 67 | 2590799 | 2591017 | + | NZ_CP026377.1 | Mixta gaviniae |
| 68 | 3863625 | 3863843 | - | NZ_CP026377.1 | Mixta gaviniae |
| 69 | 1099660 | 1099854 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 70 | 2601057 | 2601251 | + | NZ_LT615367.1 | Dickeya aquatica |
| 71 | 12061 | 12252 | + | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 72 | 3016626 | 3016844 | - | NZ_CP028271.1 | Mixta intestinalis |
| 73 | 1746725 | 1746943 | - | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 74 | 1332485 | 1332721 | - | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 75 | 8471 | 8692 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 76 | 1279028 | 1279246 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 77 | 1866534 | 1866725 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 78 | 2687342 | 2687533 | + | NZ_CP025799.1 | Dickeya zeae |
| 79 | 2073029 | 2073220 | - | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 80 | 2712695 | 2712886 | + | NZ_CP031560.1 | Dickeya dianthicola |
| 81 | 2756870 | 2757061 | + | NC_014500.1 | Dickeya dadantii 3937 |
| 82 | 5032845 | 5033036 | - | NZ_CP009460.1 | Dickeya fangzhongdai |
| 83 | 3460148 | 3460366 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 84 | 715432 | 715650 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 85 | 4109164 | 4109382 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 86 | 1101343 | 1101561 | + | NZ_CP031123.2 | Providencia huaxiensis |
| 87 | 3645669 | 3645887 | - | NZ_CP031123.2 | Providencia huaxiensis |
| 88 | 912894 | 913112 | + | NZ_AP014857.1 | Escherichia albertii |
| 89 | 3519736 | 3519924 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 90 | 1757611 | 1757829 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 91 | 3433991 | 3434200 | - | NZ_CP026364.1 | Proteus hauseri |
| 92 | 2844431 | 2844649 | - | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 93 | 10251 | 10472 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 94 | 2118115 | 2118333 | - | NC_010554.1 | Proteus mirabilis HI4320 |
| 95 | 656418 | 656636 | + | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 96 | 1757803 | 1758021 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 97 | 476465 | 476686 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 98 | 1690142 | 1690342 | + | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 99 | 1589980 | 1590195 | + | NZ_CP050150.1 | Hafnia alvei |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP057657.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF04985.16 | 0.76 | 59 | 4689.5 | same-strand | Phage tail tube protein FII |
| 2 | PF10109.11 | 0.82 | 64 | 4333 | same-strand | Phage tail assembly chaperone proteins, E, or 41 or 14 |
| 3 | PF10145.11 | 0.62 | 48 | 1694.5 | same-strand | Phage-related minor tail protein |
| 4 | PF06995.13 | 0.86 | 67 | 1230.5 | same-strand | Phage P2 GpU |
| 5 | PF05954.13 | 0.77 | 60 | 80 | same-strand | Phage tail baseplate hub (GPD) |
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