Result : A5CQ53
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | ATP synthase subunit c (ATP synthase F(0) sector subunit c) (F-type ATPase subunit c) (F-ATPase subunit c) (Lipid-binding protein) |
| NCBI Accession ID | AM711867.1 |
| Organism | Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) |
| Left | 1331665 |
| Right | 1331898 |
| Strand | + |
| Nucleotide Sequence | GTGGACCCCATCATTCTCGCCGAGATCAACGGCAACATCGCGACCGTCGGCTACGGCCTCGCAGCGATCGGCCCCGGCATCGGTGTCGGGATCGTCGCGGGCAAGACCGTCGAGGCCATGGCCCGCCAGCCCGAGATGGCCGGCAGCCTCCGCACCACGATGTTCCTCGGCATCGCGTTCTCCGAGGCGCTCGCGCTCATCGGCCTCGCGACCTACTTCATCTTCACCAACTAG |
| Sequence | MDPIILAEINGNIATVGYGLAAIGPGIGVGIVAGKTVEAMARQPEMAGSLRTTMFLGIAFSEALALIGLATYFIFTN |
| Source of smORF | Swiss-Prot |
| Function | F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. {ECO:0000255|HAMAP-Rule:MF_01396}.; Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits. {ECO:0000255|HAMAP-Rule:MF_01396}. |
| Pubmed ID | 18192381 |
| Domain | CDD:412393 |
| Functional Category | Others |
| Uniprot ID | A5CQ53 |
| ORF Length (Amino Acid) | 77 |
++ More..
| Conservation Analysis |
No. of Species: 284
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1305870 | 1306103 | + | NZ_CP033724.1 | Clavibacter michiganensis subsp. michiganensis |
| 2 | 1677944 | 1678180 | - | NZ_CP028129.1 | Rathayibacter rathayi |
| 3 | 2018082 | 2018318 | - | NZ_CP047186.1 | Rathayibacter tanaceti |
| 4 | 1966630 | 1966866 | - | NZ_CP015515.1 | Rathayibacter tritici |
| 5 | 1448907 | 1449143 | - | NZ_CP028130.1 | Rathayibacter iranicus |
| 6 | 2741078 | 2741314 | - | NZ_CP047180.1 | Rathayibacter festucae |
| 7 | 211424 | 211660 | + | NZ_AP017457.1 | Aurantimicrobium minutum |
| 8 | 920811 | 921047 | + | NZ_CP026949.1 | Mycetocola zhujimingii |
| 9 | 2393578 | 2393805 | - | NZ_CP049933.1 | Leucobacter coleopterorum |
| 10 | 2188514 | 2188756 | - | NZ_CP071883.1 | Curtobacterium flaccumfaciens pv. flaccumfaciens |
| 11 | 1761016 | 1761249 | + | NZ_CP017146.1 | Marisediminicola antarctica |
| 12 | 2112884 | 2113129 | - | NZ_CP031421.1 | Microbacterium oleivorans |
| 13 | 938795 | 939028 | + | NZ_CP016282.1 | Cryobacterium arcticum |
| 14 | 1457637 | 1457870 | - | NZ_CP030033.1 | Cryobacterium soli |
| 15 | 1008202 | 1008435 | + | NZ_CP028913.1 | Agromyces badenianii |
| 16 | 3019653 | 3019886 | - | NZ_CP013979.1 | Agromyces aureus |
| 17 | 1143841 | 1144068 | - | NZ_CP049863.1 | Leucobacter viscericola |
| 18 | 909109 | 909342 | + | NZ_CP058670.1 | Chryseoglobus indicus |
| 19 | 2189381 | 2189611 | - | NZ_CP020715.1 | Cnuibacter physcomitrellae |
| 20 | 1393919 | 1394143 | - | NZ_CP026923.1 | Pontimonas salivibrio |
| 21 | 2298429 | 2298656 | + | NZ_CP060716.1 | Leucobacter denitrificans |
| 22 | 1912123 | 1912344 | - | NC_022438.1 | Leifsonia xyli subsp. cynodontis DSM 46306 |
| 23 | 7056356 | 7056577 | - | NZ_CP023445.1 | Actinosynnema pretiosum |
| 24 | 7192943 | 7193164 | - | NC_013093.1 | Actinosynnema mirum DSM 43827 |
| 25 | 2283167 | 2283358 | - | NZ_CP031422.1 | Microbacterium oxydans |
| 26 | 433707 | 433937 | + | NZ_CP007490.1 | Rhodoluna lacicola |
| 27 | 1076615 | 1076866 | - | NZ_CP032788.1 | Corynebacterium xerosis |
| 28 | 2543988 | 2544212 | + | NZ_CP065682.1 | Brevibacterium casei |
| 29 | 1339729 | 1339974 | + | NZ_CP011542.1 | Corynebacterium mustelae |
| 30 | 180727 | 180981 | + | NZ_CP068168.1 | Corynebacterium amycolatum |
| 31 | 2699089 | 2699310 | - | NZ_CP049934.1 | Leucobacter insecticola |
| 32 | 3261786 | 3262022 | - | NZ_CP035491.1 | Agromyces protaetiae |
| 33 | 1258408 | 1258647 | + | NZ_CP004353.1 | Corynebacterium vitaeruminis DSM 20294 |
| 34 | 2225994 | 2226203 | - | NZ_CP044231.1 | Microbacterium caowuchunii |
| 35 | 1175679 | 1175915 | + | NZ_CP044232.1 | Microbacterium lushaniae |
| 36 | 1716438 | 1716632 | - | NC_015673.1 | Corynebacterium resistens DSM 45100 |
| 37 | 492123 | 492359 | - | NZ_CP049255.1 | Microbacterium endophyticum |
| 38 | 1051562 | 1051801 | + | NZ_CP011541.1 | Corynebacterium epidermidicanis |
| 39 | 1007282 | 1007491 | + | NZ_CP031423.1 | Microbacterium lemovicicum |
| 40 | 1217546 | 1217782 | + | NZ_CP038266.1 | Microbacterium wangchenii |
| 41 | 2503414 | 2503650 | - | NZ_CP018762.1 | Microbacterium aurum |
| 42 | 1452185 | 1452430 | - | NZ_CP046883.1 | Corynebacterium anserum |
| 43 | 2153463 | 2153690 | - | NC_013172.1 | Brachybacterium faecium DSM 4810 |
| 44 | 1036176 | 1036421 | + | NZ_CP006841.1 | Corynebacterium lactis RW2-5 |
| 45 | 1845223 | 1845453 | - | NZ_CP035495.1 | Xylanimonas allomyrinae |
| 46 | 183975 | 184208 | - | NZ_CP061344.1 | Microbacterium hominis |
| 47 | 1044774 | 1044998 | - | NZ_CP035810.1 | Brevibacterium luteolum |
| 48 | 2677103 | 2677333 | - | NC_013530.1 | Xylanimonas cellulosilytica DSM 15894 |
| 49 | 1147686 | 1147919 | - | NZ_CP069485.1 | Corynebacterium glucuronolyticum |
| 50 | 1154054 | 1154290 | + | NC_013521.1 | Sanguibacter keddieii DSM 10542 |
| 51 | 1068163 | 1068405 | + | NZ_CP019688.1 | Corynebacterium glaucum |
| 52 | 212410 | 212622 | - | NZ_CP035494.1 | Microbacterium protaetiae |
| 53 | 959991 | 960230 | + | NZ_CP033897.1 | Corynebacterium gerontici |
| 54 | 2887295 | 2887522 | + | NZ_CP035806.1 | Leucobacter triazinivorans |
| 55 | 988018 | 988257 | + | NZ_LR738855.1 | Corynebacterium rouxii |
| 56 | 953765 | 954004 | + | NZ_LN831026.1 | Corynebacterium diphtheriae |
| 57 | 952382 | 952615 | + | NZ_CP064760.1 | Microbacterium schleiferi |
| 58 | 1695526 | 1695750 | + | NZ_CP026734.1 | Brevibacterium linens |
| 59 | 1433593 | 1433835 | - | NZ_CP033898.1 | Corynebacterium pseudopelargi |
| 60 | 1433208 | 1433450 | - | NZ_CP035299.1 | Corynebacterium pelargi |
| 61 | 939942 | 940187 | + | NZ_CP009248.1 | Corynebacterium sphenisci DSM 44792 |
| 62 | 1332715 | 1332960 | + | NC_020302.1 | Corynebacterium halotolerans YIM 70093 = DSM 44683 |
| 63 | 898009 | 898248 | + | NC_017301.2 | Corynebacterium pseudotuberculosis C231 |
| 64 | 2447307 | 2447546 | + | NZ_LT906443.1 | Corynebacterium ulcerans |
| 65 | 1140858 | 1141103 | + | NZ_LT906467.1 | Corynebacterium imitans |
| 66 | 1862504 | 1862722 | + | NZ_CP025333.1 | Brevibacterium aurantiacum |
| 67 | 2294169 | 2294402 | + | NZ_CP049253.1 | Microbacterium amylolyticum |
| 68 | 1688580 | 1688819 | - | NZ_CP009251.1 | Corynebacterium stationis |
| 69 | 933916 | 934155 | + | NZ_CP011546.1 | Corynebacterium uterequi |
| 70 | 2242982 | 2243218 | + | NZ_CP068161.1 | Corynebacterium propinquum |
| 71 | 1046787 | 1047026 | + | NZ_CP039247.1 | Corynebacterium endometrii |
| 72 | 1391259 | 1391456 | - | NZ_CP008944.1 | Corynebacterium atypicum |
| 73 | 350012 | 350242 | - | NZ_CP009312.1 | Lawsonella clevelandensis |
| 74 | 1458665 | 1458901 | + | NZ_CP031425.1 | Microbacterium foliorum |
| 75 | 1723150 | 1723380 | - | NZ_CP022544.1 | Bifidobacterium pseudolongum |
| 76 | 355240 | 355470 | - | NZ_CP018044.1 | Bifidobacterium choerinum |
| 77 | 2260548 | 2260775 | - | NZ_CP035037.1 | Leucobacter muris |
| 78 | 2734720 | 2734965 | - | NC_015671.1 | Cellulomonas gilvus ATCC 13127 |
| 79 | 975161 | 975406 | + | NZ_CP009215.1 | Corynebacterium ureicelerivorans |
| 80 | 2815333 | 2815563 | - | NZ_CP039291.1 | Cellulomonas shaoxiangyii |
| 81 | 1942012 | 1942245 | - | NZ_LS483423.1 | Jonesia denitrificans |
| 82 | 1766701 | 1766940 | - | NZ_LR698967.1 | Corynebacterium ammoniagenes |
| 83 | 522459 | 522686 | - | NC_004572.3 | Tropheryma whipplei str. Twist |
| 84 | 3133102 | 3133353 | - | NC_015514.1 | Cellulomonas fimi ATCC 484 |
| 85 | 936625 | 936870 | + | NZ_CP026948.1 | Corynebacterium liangguodongii |
| 86 | 1469645 | 1469884 | - | NZ_CP026947.1 | Corynebacterium yudongzhengii |
| 87 | 1044412 | 1044651 | + | NZ_CP011311.1 | Corynebacterium camporealensis |
| 88 | 1526793 | 1527020 | - | NZ_CP006018.1 | Bifidobacterium indicum LMG 11587 = DSM 20214 |
| 89 | 1564121 | 1564348 | - | NZ_CP007287.1 | Bifidobacterium coryneforme |
| 90 | 1883825 | 1884052 | - | NC_018720.1 | Bifidobacterium asteroides PRL2011 |
| 91 | 1321639 | 1321869 | - | NZ_CP062938.1 | Bifidobacterium eulemuris |
| 92 | 1556185 | 1556415 | + | NZ_CP062948.1 | Bifidobacterium lemurum |
| 93 | 37309 | 37536 | + | NZ_CP011786.1 | Bifidobacterium actinocoloniiforme DSM 22766 |
| 94 | 1183307 | 1183549 | + | NZ_CP006764.1 | Corynebacterium doosanense CAU 212 = DSM 45436 |
| 95 | 1411830 | 1412069 | - | NZ_LT906473.1 | Corynebacterium cystitidis |
| 96 | 1182838 | 1183068 | + | NC_014151.1 | Cellulomonas flavigena DSM 20109 |
| 97 | 1088426 | 1088677 | + | NZ_CP011545.1 | Corynebacterium testudinoris |
| 98 | 1576006 | 1576245 | - | NZ_CP011312.1 | Corynebacterium kutscheri |
| 99 | 1191330 | 1191572 | + | NC_012590.1 | Corynebacterium aurimucosum ATCC 700975 |
| 100 | 1571135 | 1571377 | - | NZ_LS483460.1 | Corynebacterium minutissimum |
| 101 | 1479649 | 1479873 | + | NC_012669.1 | Beutenbergia cavernae DSM 12333 |
| 102 | 1224071 | 1224313 | + | NZ_CP010827.1 | Corynebacterium singulare |
| 103 | 1679091 | 1679336 | - | NZ_CP009249.1 | Corynebacterium phocae |
| 104 | 2805608 | 2805838 | - | NZ_CP045529.1 | Luteimicrobium xylanilyticum |
| 105 | 1044877 | 1045116 | + | NZ_CP007790.1 | Corynebacterium marinum DSM 44953 |
| 106 | 3339606 | 3339851 | - | NC_015564.1 | Hoyosella subflava DQS3-9A1 |
| 107 | 2165783 | 2166004 | - | NZ_CP038157.1 | Corynebacterium sanguinis |
| 108 | 1196150 | 1196392 | + | NZ_CP009245.1 | Corynebacterium aquilae DSM 44791 |
| 109 | 839565 | 839756 | + | NZ_CP038256.1 | Microbacterium sediminis |
| 110 | 1203845 | 1204087 | + | NZ_CP009220.1 | Corynebacterium deserti GIMN1.010 |
| 111 | 1421908 | 1422150 | + | NZ_AP017369.1 | Corynebacterium suranareeae |
| 112 | 1232138 | 1232380 | + | NZ_CP015622.1 | Corynebacterium crudilactis |
| 113 | 1781168 | 1781395 | - | NZ_AP012325.1 | Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043 |
| 114 | 1191141 | 1191383 | + | NC_020506.1 | Corynebacterium callunae DSM 20147 |
| 115 | 1880505 | 1880732 | - | NZ_CP025199.1 | Bifidobacterium pseudocatenulatum |
| 116 | 1908187 | 1908414 | - | NZ_CP028341.1 | Bifidobacterium adolescentis |
| 117 | 2221834 | 2222061 | - | NZ_AP012326.1 | Bifidobacterium dentium JCM 1195 = DSM 20436 |
| 118 | 6195565 | 6195816 | + | NZ_CP027306.1 | Streptomyces atratus |
| 119 | 148706 | 148936 | + | NZ_AP012322.1 | Bifidobacterium angulatum DSM 20098 = JCM 7096 |
| 120 | 5551325 | 5551552 | + | NC_016109.1 | Kitasatospora setae KM-6054 |
| 121 | 1789997 | 1790239 | + | NZ_LS483464.1 | Corynebacterium renale |
| 122 | 6100185 | 6100433 | + | NZ_CP071139.1 | Streptomyces nojiriensis |
| 123 | 5254292 | 5254525 | + | NZ_CP029196.1 | Streptomyces venezuelae |
| 124 | 2146739 | 2146981 | - | NZ_CP048882.1 | Streptomyces bathyalis |
| 125 | 2771889 | 2772125 | - | NZ_CP023698.1 | Streptomyces viridifaciens |
| 126 | 3499328 | 3499558 | - | NZ_CP041694.1 | Cellulosimicrobium cellulans |
| 127 | 5726217 | 5726450 | + | NZ_CP010407.1 | Streptomyces vietnamensis |
| 128 | 1280664 | 1280879 | + | NC_014246.1 | Mobiluncus curtisii ATCC 43063 |
| 129 | 3729505 | 3729741 | + | NZ_CP014209.1 | Isoptericola dokdonensis DS-3 |
| 130 | 4354241 | 4354468 | - | NC_013757.1 | Geodermatophilus obscurus DSM 43160 |
| 131 | 1516460 | 1516690 | - | NZ_CP012117.1 | Dermabacter vaginalis |
| 132 | 2451409 | 2451642 | - | NZ_CP023692.1 | Streptomyces vinaceus |
| 133 | 6448358 | 6448594 | + | NZ_CP023690.1 | Streptomyces spectabilis |
| 134 | 3415069 | 3415296 | + | NZ_CP047156.1 | Epidermidibacterium keratini |
| 135 | 3217010 | 3217240 | - | NZ_CP032427.1 | Streptomyces griseorubiginosus |
| 136 | 1297005 | 1297217 | - | NZ_CP034438.1 | Flaviflexus salsibiostraticola |
| 137 | 4636543 | 4636779 | + | NZ_CP031264.1 | Streptacidiphilus bronchialis |
| 138 | 913990 | 914205 | + | NZ_CP051884.1 | Cellulomonas taurus |
| 139 | 1746679 | 1746915 | - | NC_020990.1 | Streptomyces albidoflavus |
| 140 | 6428243 | 6428494 | + | NZ_CP031455.1 | Streptomyces olivoreticuli subsp. olivoreticuli |
| 141 | 2511182 | 2511421 | - | NC_015588.1 | Isoptericola variabilis 225 |
| 142 | 4486816 | 4487058 | + | NC_016111.1 | Streptomyces cattleya NRRL 8057 = DSM 46488 |
| 143 | 5072165 | 5072416 | + | NZ_CP040752.1 | Streptomyces rectiverticillatus |
| 144 | 2969195 | 2969425 | - | NZ_CP034687.1 | Streptomyces griseoviridis |
| 145 | 2140282 | 2140515 | - | NZ_CP031742.1 | Streptomyces koyangensis |
| 146 | 5220400 | 5220630 | + | NZ_CP023693.1 | Streptomyces cinereoruber |
| 147 | 5432171 | 5432401 | + | NZ_CP042266.1 | Streptomyces qinzhouensis |
| 148 | 7087862 | 7088077 | + | NZ_CP034463.1 | Streptomyces aquilus |
| 149 | 359175 | 359402 | + | NZ_CP006712.1 | Bifidobacterium breve JCM 7017 |
| 150 | 357728 | 357955 | + | NZ_CP026999.1 | Bifidobacterium longum |
| 151 | 411105 | 411335 | + | NZ_CP040508.1 | Rhodoluna limnophila |
| 152 | 5618323 | 5618553 | + | NZ_CP020700.1 | Streptomyces tsukubensis |
| 153 | 3282782 | 3283006 | - | NC_013929.1 | Streptomyces scabiei 87.22 |
| 154 | 1978826 | 1979044 | + | NZ_CP008802.1 | Actinotignum schaalii |
| 155 | 1182080 | 1182331 | + | NZ_CP030862.1 | Streptomyces globosus |
| 156 | 2774838 | 2775068 | - | NZ_CP026652.1 | Streptomyces dengpaensis |
| 157 | 7306690 | 7306923 | + | NZ_CP045096.1 | Streptomyces phaeolivaceus |
| 158 | 2339454 | 2339684 | + | NC_013235.1 | Nakamurella multipartita DSM 44233 |
| 159 | 5420067 | 5420297 | + | NZ_CP023703.1 | Streptomyces galilaeus |
| 160 | 3045341 | 3045568 | - | NZ_CP051006.1 | Streptomyces griseofuscus |
| 161 | 2533753 | 2533986 | - | NZ_CP022310.1 | Streptomyces calvus |
| 162 | 2497404 | 2497652 | - | NZ_CP060404.1 | Streptomyces buecherae |
| 163 | 1597845 | 1598093 | + | NZ_CP016279.1 | Streptomyces griseochromogenes |
| 164 | 2207444 | 2207671 | - | NZ_CP023202.1 | Streptomyces xinghaiensis S187 |
| 165 | 3372685 | 3372921 | - | NZ_CP023699.1 | Streptomyces kanamyceticus |
| 166 | 5865679 | 5865927 | + | NZ_CP071839.1 | Streptomyces cyanogenus |
| 167 | 4979327 | 4979551 | + | NZ_CP015866.1 | Streptomyces parvulus |
| 168 | 5421422 | 5421646 | + | NZ_CP012382.1 | Streptomyces ambofaciens ATCC 23877 |
| 169 | 1020557 | 1020781 | + | NC_014165.1 | Thermobispora bispora DSM 43833 |
| 170 | 2293520 | 2293747 | - | NZ_CP034279.1 | Streptomyces ficellus |
| 171 | 5335148 | 5335369 | + | NZ_CP023407.1 | Streptomyces fungicidicus |
| 172 | 3193060 | 3193281 | - | NZ_CP030073.1 | Streptomyces cadmiisoli |
| 173 | 3066309 | 3066530 | - | NZ_AP023440.1 | Streptomyces glomeroaurantiacus |
| 174 | 6895911 | 6896135 | + | NZ_CP034539.1 | Streptomyces cyaneochromogenes |
| 175 | 5977242 | 5977484 | + | NZ_CP023691.1 | Streptomyces platensis |
| 176 | 2602680 | 2602892 | - | NZ_CP039292.1 | Actinomyces procaprae |
| 177 | 4502067 | 4502303 | + | NZ_CP029254.1 | Streptomyces spongiicola |
| 178 | 3277269 | 3277499 | - | NZ_CP045643.1 | Streptomyces fagopyri |
| 179 | 4275017 | 4275250 | + | NZ_CP032229.1 | Streptomyces seoulensis |
| 180 | 6535528 | 6535734 | + | NZ_CP070326.1 | Streptomyces noursei |
| 181 | 7331422 | 7331664 | + | NZ_CP065050.1 | Streptomyces solisilvae |
| 182 | 2867547 | 2867780 | - | NZ_CP032698.1 | Streptomyces hundungensis |
| 183 | 2565245 | 2565475 | - | NZ_CP023701.1 | Streptomyces subrutilus |
| 184 | 8207020 | 8207253 | - | NZ_CP063373.1 | Streptomyces ferrugineus |
| 185 | 3270708 | 3270941 | - | NZ_CP022744.1 | Streptomyces lincolnensis |
| 186 | 4736544 | 4736780 | + | NZ_CP029188.1 | Streptomyces tirandamycinicus |
| 187 | 5135461 | 5135691 | + | NZ_CP029043.1 | Streptomyces nigra |
| 188 | 3319287 | 3319517 | - | NZ_CP023689.1 | Streptomyces chartreusis |
| 189 | 6132133 | 6132378 | + | NZ_CP020569.1 | Streptomyces gilvosporeus |
| 190 | 4418375 | 4418611 | + | NZ_CP009922.3 | Streptomyces xiamenensis |
| 191 | 4496725 | 4496961 | + | NZ_CP054938.1 | Streptomyces harbinensis |
| 192 | 1613347 | 1613556 | + | NZ_LR134476.1 | Trueperella bialowiezensis |
| 193 | 3069620 | 3069859 | - | NZ_CP023688.1 | Streptomyces rimosus |
| 194 | 6333315 | 6333551 | + | NZ_CP022685.1 | Streptomyces formicae |
| 195 | 806989 | 807216 | - | NZ_LN849456.1 | Devriesea agamarum |
| 196 | 3947353 | 3947577 | - | NZ_AP023355.1 | Actinocatenispora thailandica |
| 197 | 4861832 | 4862080 | - | NC_016582.1 | Streptomyces bingchenggensis BCW-1 |
| 198 | 3531439 | 3531681 | - | NC_003155.5 | Streptomyces avermitilis MA-4680 = NBRC 14893 |
| 199 | 1551254 | 1551484 | - | NZ_CP031356.1 | Brachybacterium saurashtrense |
| 200 | 2164726 | 2164965 | - | NZ_CP015453.1 | Dietzia psychralcaliphila |
| 201 | 1094840 | 1095076 | + | NZ_CP009246.1 | Corynebacterium flavescens |
| 202 | 415307 | 415516 | + | NZ_CP070228.1 | Arcanobacterium phocisimile |
| 203 | 2327520 | 2327765 | - | NZ_CP023702.1 | Streptomyces nitrosporeus |
| 204 | 1470342 | 1470587 | + | NZ_CP051486.1 | Streptomyces pratensis |
| 205 | 1518834 | 1519037 | - | NZ_LR134357.1 | Actinomyces israelii |
| 206 | 2081758 | 2081997 | - | NZ_CP015449.1 | Dietzia lutea |
| 207 | 2076466 | 2076696 | + | NZ_CP023563.1 | Brachybacterium vulturis |
| 208 | 441713 | 441943 | - | NZ_CP022316.1 | Brachybacterium avium |
| 209 | 5352592 | 5352840 | + | NZ_CP010849.1 | Streptomyces cyaneogriseus subsp. noncyanogenus |
| 210 | 2808895 | 2809143 | - | NZ_LN831790.1 | Streptomyces leeuwenhoekii |
| 211 | 5797077 | 5797328 | + | NZ_CP019457.1 | Streptomyces lydicus |
| 212 | 430845 | 431084 | - | NZ_CP014635.1 | Corynebacterium simulans |
| 213 | 722909 | 723112 | + | NZ_CP066802.1 | Actinomyces weissii |
| 214 | 5137045 | 5137281 | + | NZ_CP072827.1 | Streptomyces mobaraensis NBRC 13819 = DSM 40847 |
| 215 | 5448178 | 5448426 | + | NZ_CP023695.1 | Streptomyces alboniger |
| 216 | 1621196 | 1621435 | - | NZ_CP067012.1 | Corynebacterium kefirresidentii |
| 217 | 2763436 | 2763648 | + | NZ_CP032624.1 | Gryllotalpicola protaetiae |
| 218 | 2991083 | 2991322 | - | NZ_CP011340.1 | Streptomyces pristinaespiralis |
| 219 | 1804103 | 1804312 | + | NZ_CP014228.1 | Actinomyces radicidentis |
| 220 | 865037 | 865246 | + | NZ_CP033325.1 | Georgenia faecalis |
| 221 | 1589405 | 1589635 | + | NZ_CP023564.1 | Brachybacterium ginsengisoli |
| 222 | 1728891 | 1729133 | - | NC_021663.1 | Corynebacterium terpenotabidum Y-11 |
| 223 | 251253 | 251456 | + | NZ_LT635457.1 | Actinomyces pacaensis |
| 224 | 2401478 | 2401699 | + | NZ_CP032630.1 | Protaetiibacter intestinalis |
| 225 | 912148 | 912354 | + | NZ_CP017812.1 | Boudabousia tangfeifanii |
| 226 | 1866645 | 1866896 | + | NZ_CP029146.1 | Rhodococcus ruber |
| 227 | 4561276 | 4561500 | + | NZ_CP061725.1 | Micromonospora craniellae |
| 228 | 1121894 | 1122118 | - | NZ_LT985188.1 | Micropruina glycogenica |
| 229 | 1164208 | 1164453 | + | NZ_CP033896.1 | Corynebacterium choanae |
| 230 | 1523333 | 1523569 | - | NC_012704.1 | Corynebacterium kroppenstedtii DSM 44385 |
| 231 | 1693621 | 1693848 | - | NZ_CP043661.1 | Kribbella qitaiheensis |
| 232 | 168271 | 168513 | + | NZ_CP042429.1 | Corynebacterium nuruki S6-4 |
| 233 | 6403672 | 6403899 | - | NZ_AP022870.1 | Phytohabitans flavus |
| 234 | 2261376 | 2261600 | - | NZ_AP022871.1 | Phytohabitans suffuscus |
| 235 | 5312824 | 5313054 | + | NZ_LR134501.1 | Nocardiopsis dassonvillei |
| 236 | 4163826 | 4164050 | - | NC_009380.1 | Salinispora tropica CNB-440 |
| 237 | 1376359 | 1376604 | + | NC_004369.1 | Corynebacterium efficiens YS-314 |
| 238 | 5231399 | 5231608 | - | NZ_CP022753.1 | Nocardiopsis gilva YIM 90087 |
| 239 | 4440683 | 4440928 | + | NC_022116.1 | Amycolatopsis mediterranei RB |
| 240 | 4441329 | 4441562 | - | NZ_CP045309.1 | Micromonospora terminaliae |
| 241 | 4570946 | 4571179 | + | NZ_CP017316.1 | Streptomyces rubrolavendulae |
| 242 | 4755662 | 4755895 | + | NZ_CP023696.1 | Streptomyces fradiae ATCC 10745 = DSM 40063 |
| 243 | 7315375 | 7315611 | - | NZ_CP023865.1 | Actinoplanes teichomyceticus ATCC 31121 |
| 244 | 4140741 | 4140995 | + | NZ_CP016793.1 | Lentzea guizhouensis |
| 245 | 10383463 | 10383657 | - | NZ_CP012752.1 | Kibdelosporangium phytohabitans |
| 246 | 5537028 | 5537258 | + | NZ_CP031194.1 | Streptomyces paludis |
| 247 | 1776351 | 1776581 | + | NZ_CP045572.1 | Nonomuraea nitratireducens |
| 248 | 80742 | 80993 | + | NZ_CP034562.1 | Flammeovirga pectinis |
| 249 | 5151613 | 5151852 | + | NZ_CP021080.1 | Streptomyces pluripotens |
| 250 | 2568541 | 2568747 | - | NC_010572.1 | Streptomyces griseus subsp. griseus NBRC 13350 |
| 251 | 5357359 | 5357565 | + | NZ_CP024957.1 | Streptomyces cavourensis |
| 252 | 5739843 | 5740049 | + | NZ_CP020570.1 | Streptomyces violaceoruber |
| 253 | 2348487 | 2348741 | - | NC_022600.1 | Gloeobacter kilaueensis JS1 |
| 254 | 5781282 | 5781488 | + | NZ_CP020563.1 | Kitasatospora albolonga |
| 255 | 5711030 | 5711260 | + | NC_021177.1 | Streptomyces fulvissimus DSM 40593 |
| 256 | 5610204 | 5610440 | + | NZ_CP063374.1 | Streptomyces chromofuscus |
| 257 | 5682463 | 5682693 | + | NZ_CP070242.1 | Streptomyces californicus |
| 258 | 2236289 | 2236498 | + | NZ_CP007519.1 | Trueperella pyogenes |
| 259 | 882658 | 882870 | + | NZ_CP017267.1 | Vagococcus teuberi |
| 260 | 4467179 | 4467400 | - | NC_013510.1 | Thermomonospora curvata DSM 43183 |
| 261 | 3507606 | 3507854 | - | NZ_CP017248.1 | Streptomyces fodineus |
| 262 | 5565837 | 5566043 | + | NZ_CP013738.1 | Streptomyces globisporus C-1027 |
| 263 | 1937857 | 1938099 | - | NZ_CP065253.1 | Streptomyces clavuligerus |
| 264 | 1475049 | 1475249 | - | NZ_CP017195.1 | Lactococcus paracarnosus |
| 265 | 6346036 | 6346275 | + | NZ_CP023694.1 | Streptomyces coeruleorubidus |
| 266 | 5794494 | 5794733 | + | NC_021985.1 | Streptomyces collinus Tu 365 |
| 267 | 1387127 | 1387339 | - | NZ_CP014989.1 | Serinicoccus hydrothermalis |
| 268 | 944403 | 944600 | + | NZ_CP022121.1 | Dehalobacterium formicoaceticum |
| 269 | 5946801 | 5947037 | + | NZ_CP021978.1 | Streptomyces hawaiiensis |
| 270 | 5215841 | 5216077 | + | NZ_AP023439.1 | Streptomyces tuirus |
| 271 | 6137778 | 6138014 | + | NZ_CP015098.1 | Streptomyces qaidamensis |
| 272 | 6342131 | 6342379 | + | NZ_CP047020.1 | Streptomyces broussonetiae |
| 273 | 1781083 | 1781316 | + | NC_013595.1 | Streptosporangium roseum DSM 43021 |
| 274 | 1885583 | 1885777 | - | NC_013124.1 | Acidimicrobium ferrooxidans DSM 10331 |
| 275 | 6437406 | 6437648 | - | NC_008278.1 | Frankia alni ACN14a |
| 276 | 1168429 | 1168683 | + | NC_014666.1 | Frankia inefficax |
| 277 | 1536806 | 1536994 | - | NZ_CP011005.1 | Psychromicrobium lacuslunae |
| 278 | 4445630 | 4445836 | - | NC_007777.1 | Frankia casuarinae |
| 279 | 2270230 | 2270448 | - | NZ_LR134379.1 | Slackia heliotrinireducens |
| 280 | 1390286 | 1390522 | + | NC_013947.1 | Stackebrandtia nassauensis DSM 44728 |
| 281 | 1376763 | 1376981 | - | NC_013170.1 | Cryptobacterium curtum DSM 15641 |
| 282 | 972217 | 972426 | + | NZ_LR134479.1 | Rothia aeria |
| 283 | 1802238 | 1802441 | - | NZ_LT635455.1 | Olsenella timonensis |
| 284 | 1723033 | 1723224 | - | NZ_AP019367.1 | Parolsenella catena |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP033724.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00953.23 | 0.87 | 246 | 1819.5 | same-strand | Glycosyl transferase family 4 |
| 2 | PF00119.22 | 0.99 | 281 | 82 | same-strand | ATP synthase A chain |
| 3 | PF00430.20 | 1.0 | 283 | 39.0 | same-strand | ATP synthase B/B' CF(0) |
| 4 | PF00213.20 | 0.99 | 281 | 592 | same-strand | ATP synthase delta (OSCP) subunit |
| 5 | PF00006.27 | 0.99 | 281 | 1664 | same-strand | ATP synthase alpha/beta family, nucleotide-binding domain |
| 6 | PF00306.29 | 1.0 | 283 | 1501 | same-strand | ATP synthase alpha/beta chain, C terminal domain |
| 7 | PF02874.25 | 1.0 | 283 | 1639.5 | same-strand | ATP synthase alpha/beta family, beta-barrel domain |
| 8 | PF00231.21 | 0.99 | 281 | 3149 | same-strand | ATP synthase |
++ More..