Result : P32696
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Phage shock protein G |
| NCBI Accession ID | U00096.3 |
| Organism | Escherichia coli (strain K12) |
| Left | 4262840 |
| Right | 4263082 |
| Strand | + |
| Nucleotide Sequence | ATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTCGGCGGTATGCTGGCATTGATGATTAAGTTGCTGCCGTGGTTACTACTGGCGATTGCGGTGGTGTGGGTTATTAAGGCGATTAAAGCACCAAAAGTGCCGAAATATCAGCGTTATGACCGCTGGCGTTACTAA |
| Sequence | MLELLFVIGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALMIKLLPWLLLAIAVVWVIKAIKAPKVPKYQRYDRWRY |
| Source of smORF | Swiss-Prot |
| Function | Effector of the phage shock response. {ECO:0000269|Pubmed:15485810}. |
| Pubmed ID | 8265357 9278503 16738553 15485810 19555453 |
| Domain | CDD:420036 |
| Functional Category | Others |
| Uniprot ID | P32696 |
| ORF Length (Amino Acid) | 80 |
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| Conservation Analysis |
No. of Species: 112
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3751326 | 3751568 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 2 | 4262840 | 4263082 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 3 | 5116121 | 5116363 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 4 | 4279440 | 4279682 | + | NZ_AP014857.1 | Escherichia albertii |
| 5 | 4326699 | 4326941 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 6 | 296826 | 297068 | + | NZ_LR134340.1 | Escherichia marmotae |
| 7 | 5066176 | 5066418 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 8 | 918547 | 918789 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 9 | 3791117 | 3791359 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 10 | 3225652 | 3225894 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 11 | 753848 | 754090 | - | NZ_LT556085.1 | Citrobacter amalonaticus |
| 12 | 317862 | 318104 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 13 | 3834680 | 3834922 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 14 | 3069392 | 3069634 | - | NZ_CP038469.1 | Citrobacter tructae |
| 15 | 3473393 | 3473635 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 16 | 3053463 | 3053705 | + | NZ_CP033744.1 | Citrobacter freundii |
| 17 | 4208930 | 4209172 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 18 | 310452 | 310694 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 19 | 91486 | 91728 | - | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 20 | 4465142 | 4465384 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 21 | 309922 | 310164 | + | NC_015968.1 | Enterobacter soli |
| 22 | 3246216 | 3246458 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 23 | 2789007 | 2789249 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 24 | 4244651 | 4244893 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 25 | 4861012 | 4861254 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 26 | 323324 | 323566 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 27 | 326413 | 326655 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 28 | 2280024 | 2280266 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 29 | 337355 | 337597 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 30 | 3594508 | 3594750 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 31 | 324799 | 325041 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 32 | 1265239 | 1265481 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 33 | 311305 | 311547 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 34 | 2069254 | 2069496 | + | NZ_CP026047.1 | Raoultella planticola |
| 35 | 4944191 | 4944433 | - | NZ_CP041247.1 | Raoultella electrica |
| 36 | 5240943 | 5241185 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 37 | 5192501 | 5192743 | - | NZ_CP054254.1 | Klebsiella variicola |
| 38 | 5659709 | 5659951 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 39 | 3811726 | 3811986 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 40 | 3890632 | 3890892 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 41 | 301141 | 301401 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 42 | 3981562 | 3981822 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 43 | 154842 | 155102 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 44 | 3874883 | 3875143 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 45 | 2029030 | 2029272 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 46 | 2214648 | 2214890 | + | NZ_CP053416.1 | Salmonella bongori |
| 47 | 4513440 | 4513682 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 48 | 4341421 | 4341660 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 49 | 5263698 | 5263940 | - | NZ_CP050508.1 | Raoultella terrigena |
| 50 | 1355590 | 1355832 | - | NZ_CP042941.1 | Atlantibacter hermannii |
| 51 | 4067138 | 4067380 | + | NZ_CP017279.1 | Enterobacter ludwigii |
| 52 | 3788311 | 3788553 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 53 | 295830 | 296072 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 54 | 2825396 | 2825638 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 55 | 5745022 | 5745264 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 56 | 3444851 | 3445084 | - | NZ_LN907827.1 | Erwinia gerundensis |
| 57 | 5800086 | 5800328 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 58 | 376295 | 376492 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 59 | 2526086 | 2526304 | - | NZ_CP009787.1 | Yersinia rohdei |
| 60 | 4315158 | 4315376 | - | NZ_CP032487.1 | Yersinia hibernica |
| 61 | 3235845 | 3236081 | - | NZ_CP067057.1 | Rahnella aceris |
| 62 | 1834540 | 1834758 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 63 | 1182331 | 1182606 | + | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 64 | 3062350 | 3062607 | + | NZ_CP034035.1 | Brenneria rubrifaciens |
| 65 | 4012221 | 4012496 | + | NZ_CP031560.1 | Dickeya dianthicola |
| 66 | 3830536 | 3830808 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 67 | 113149 | 113421 | - | NZ_CP015749.1 | Pectobacterium parmentieri |
| 68 | 4844257 | 4844475 | - | NZ_LR134494.1 | Serratia quinivorans |
| 69 | 389270 | 389491 | + | NZ_CP050150.1 | Hafnia alvei |
| 70 | 1044466 | 1044738 | + | NZ_CP065044.1 | Pectobacterium aroidearum |
| 71 | 2061635 | 2061853 | + | NZ_CP007230.1 | Yersinia similis |
| 72 | 2510484 | 2510756 | - | NZ_CP047495.1 | Pectobacterium brasiliense |
| 73 | 836131 | 836403 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 74 | 4905838 | 4906080 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 75 | 4131434 | 4131652 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 76 | 2817404 | 2817676 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 77 | 3417529 | 3417762 | - | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 78 | 4049093 | 4049380 | + | NZ_CP034938.1 | Pectobacterium odoriferum |
| 79 | 1234155 | 1234373 | - | NZ_CP011254.1 | Serratia fonticola |
| 80 | 827031 | 827306 | - | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 81 | 729905 | 730177 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 82 | 3473840 | 3474070 | - | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 83 | 281160 | 281387 | + | NZ_CP034148.1 | Pantoea agglomerans |
| 84 | 860458 | 860679 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 85 | 366031 | 366264 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 86 | 3807631 | 3807858 | - | NZ_CP038853.1 | Pantoea vagans |
| 87 | 401828 | 402046 | + | NZ_CP011118.1 | Yersinia enterocolitica |
| 88 | 789411 | 789686 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 89 | 4253752 | 4253970 | - | NZ_CP043727.1 | Yersinia canariae |
| 90 | 3798418 | 3798645 | - | NZ_CP045720.1 | Pantoea eucalypti |
| 91 | 4017929 | 4018201 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 92 | 2294200 | 2294418 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 93 | 263283 | 263501 | + | NZ_CP046293.1 | Yersinia intermedia |
| 94 | 3812107 | 3812385 | + | NZ_CP025799.1 | Dickeya zeae |
| 95 | 2987165 | 2987383 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 96 | 4923668 | 4923886 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 97 | 791730 | 791948 | - | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 98 | 4805017 | 4805235 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 99 | 1037528 | 1037746 | - | NZ_CP065640.1 | Serratia rubidaea |
| 100 | 3985846 | 3986064 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 101 | 1462398 | 1462616 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 102 | 2014657 | 2014875 | + | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 103 | 248676 | 248894 | + | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 104 | 5322181 | 5322402 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 105 | 3750669 | 3750944 | - | NZ_CP009460.1 | Dickeya fangzhongdai |
| 106 | 3977468 | 3977743 | + | NC_014500.1 | Dickeya dadantii 3937 |
| 107 | 3857001 | 3857231 | - | NZ_CP015581.1 | Tatumella citrea |
| 108 | 4754764 | 4754982 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 109 | 427838 | 428056 | + | NZ_CP071320.1 | Serratia ureilytica |
| 110 | 848779 | 849000 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 111 | 4731007 | 4731225 | - | NZ_LT906479.1 | Serratia ficaria |
| 112 | 449292 | 449516 | + | NZ_CP023009.1 | Lonsdalea britannica |
| 113 | 4440500 | 4440739 | - | NZ_CP006569.1 | Sodalis praecaptivus |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP061527.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01475.21 | 0.72 | 81 | 2976.0 | opposite-strand | Ferric uptake regulator family |
| 2 | PF01207.19 | 1.0 | 112 | 157 | same-strand | Dihydrouridine synthase (Dus) |
| 3 | PF00107.28 | 0.69 | 77 | 185.5 | opposite-strand | Zinc-binding dehydrogenase |
| 4 | PF13602.8 | 0.97 | 109 | 227.0 | opposite-strand | Zinc-binding dehydrogenase |
| 5 | PF03796.17 | 0.97 | 109 | 1329.5 | same-strand | DnaB-like helicase C terminal domain |
| 6 | PF00772.23 | 0.97 | 109 | 1329.5 | same-strand | DnaB-like helicase N terminal domain |
| 7 | PF13481.8 | 0.97 | 109 | 1329.5 | same-strand | AAA domain |
| 8 | PF01168.22 | 0.86 | 96 | 2865 | same-strand | Alanine racemase, N-terminal domain |
| 9 | PF00842.23 | 0.87 | 97 | 2865.0 | same-strand | Alanine racemase, C-terminal domain |
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