Protein Information |
Information Type | Description |
---|---|
Protein name | Putative cytochrome bd-II ubiquinol oxidase subunit AppX |
NCBI Accession ID | M58708.1 |
Organism | Escherichia coli (strain K12) |
Left | 16 |
Right | 108 |
Strand | + |
Nucleotide Sequence | ATGTGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAA |
Sequence | MWYLLWFVGILLMCSLSTLVLVWLDPRLKS |
Source of smORF | Swiss-Prot |
Function | Might be part of cytochrome bd-II oxidase (appB and appC). Able to restore reductant resistance to a cydX deletion mutant upon overexpression. CydX and this protein may have some functional overlap. {ECO:0000269|Pubmed:23749980}. |
Pubmed ID | 2168385 1658595 9278503 16738553 19121005 19734316 21778229 23749980 |
Domain | CDD:173210 |
Functional Category | Others |
Uniprot ID | P24244 |
ORF Length (Amino Acid) | 30 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 1219707 | 1219799 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
2 | 1040445 | 1040537 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
3 | 1028871 | 1028963 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
4 | 2709643 | 2709735 | - | NZ_CP061527.1 | Shigella dysenteriae |
5 | 1188309 | 1188398 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
6 | 3287279 | 3287368 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
7 | 1052106 | 1052198 | + | NZ_AP014857.1 | Escherichia albertii |
8 | 1707253 | 1707345 | + | NZ_LR134340.1 | Escherichia marmotae |
9 | 2221247 | 2221336 | + | NZ_CP023706.1 | Edwardsiella tarda |
10 | 508385 | 508474 | + | NZ_CP016043.1 | Edwardsiella hoshinae |
11 | 4403775 | 4403864 | + | NZ_CP053416.1 | Salmonella bongori |
12 | 1893092 | 1893181 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
13 | 1317725 | 1317814 | + | NZ_CP044098.1 | Citrobacter portucalensis |
14 | 2367711 | 2367800 | + | NZ_CP038469.1 | Citrobacter tructae |
15 | 3793844 | 3793933 | - | NZ_CP033744.1 | Citrobacter freundii |
16 | 2944069 | 2944155 | - | NZ_CP035492.1 | Paenibacillus protaetiae |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF07449.13 | 0.93 | 14 | 3693 | same-strand | Hydrogenase-1 expression protein HyaE |
2 | PF04809.15 | 0.93 | 14 | 2840.0 | same-strand | HupH hydrogenase expression protein, C-terminal conserved region |
3 | PF01654.19 | 0.93 | 14 | 1161 | same-strand | Cytochrome bd terminal oxidase subunit I |
4 | PF02322.17 | 0.93 | 14 | 13 | same-strand | Cytochrome bd terminal oxidase subunit II |