* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_006461.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00694.21
|
1.0
|
3
|
1487
|
same-strand
|
Aconitase C-terminal domain
|
2
|
PF05685.14
|
1.0
|
3
|
3145
|
same-strand
|
Putative restriction endonuclease
|
3
|
PF00579.27
|
0.67
|
2
|
219.5
|
opposite-strand
|
tRNA synthetases class I (W and Y)
|
4
|
PF00330.22
|
0.67
|
2
|
67.5
|
same-strand
|
Aconitase family (aconitate hydratase)
|
5
|
PF00180.22
|
0.67
|
2
|
2093.5
|
same-strand
|
Isocitrate/isopropylmalate dehydrogenase
|
++ More..