Protein Information |
Information Type | Description |
---|---|
Protein name | Putative uncharacterized protein ORF7 |
NCBI Accession ID | M32882.1 |
Organism | Clostridium perfringens |
Left | 4347 |
Right | 4514 |
Strand | + |
Nucleotide Sequence | ATGAAAAATATAGATTCAATAAAGTTAAGAATATTTTCAAGCATATGTTTTGCTATTGCAGGTATATTAGGATTAGTTGATAAAAATTATTTATTAGGAGGTGCATTTATTTTAATGTTAGTTAGTAATATTATTTTAATTATTTCAGAAAAGAAAAAATTAAAATAA |
Sequence | MKNIDSIKLRIFSSICFAIAGILGLVDKNYLLGGAFILMLVSNIILIISEKKKLK |
Source of smORF | Swiss-Prot |
Function | |
Pubmed ID | 2901768 |
Domain | |
Functional Category | Others |
Uniprot ID | P18018 |
ORF Length (Amino Acid) | 55 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 887820 | 887984 | - | NZ_CP011803.1 | Clostridium carboxidivorans P7 |
2 | 4082327 | 4082491 | + | NZ_CP012395.1 | Clostridium autoethanogenum DSM 10061 |
3 | 1841205 | 1841369 | + | NC_014328.1 | Clostridium ljungdahlii DSM 13528 |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF13630.8 | 0.67 | 2 | 230.0 | same-strand | SdpI/YfhL protein family |
2 | PF12650.9 | 0.67 | 2 | 31.0 | same-strand | Domain of unknown function (DUF3784) |
3 | PF01569.23 | 0.67 | 2 | 403.0 | same-strand | PAP2 superfamily |
4 | PF08984.13 | 0.67 | 2 | 2193.0 | same-strand | Domain of unknown function (DUF1858) |