* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP019238.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF03230.15
|
0.67
|
2
|
1894.5
|
same-strand
|
Antirestriction protein
|
2
|
PF17383.4
|
0.67
|
2
|
75.0
|
same-strand
|
Uncharacterized KorC regulated protein A
|
3
|
PF17394.4
|
0.67
|
2
|
130.5
|
same-strand
|
Uncharacterized KleE stable inheritance protein
|
4
|
PF16509.7
|
0.67
|
2
|
982.0
|
same-strand
|
TrfB plasmid transcriptional repressor
|
5
|
PF13614.8
|
0.67
|
2
|
1290.0
|
same-strand
|
AAA domain
|
6
|
PF01656.25
|
0.67
|
2
|
1290.0
|
same-strand
|
CobQ/CobB/MinD/ParA nucleotide binding domain
|
7
|
PF06613.13
|
0.67
|
2
|
2051.0
|
same-strand
|
KorB C-terminal beta-barrel domain
|
8
|
PF02195.20
|
0.67
|
2
|
2051.0
|
same-strand
|
ParB-like nuclease domain
|
9
|
PF08535.12
|
0.67
|
2
|
2051.0
|
same-strand
|
KorB domain
|
++ More..