Result : P0DKB3
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Small protein MntS |
| NCBI Accession ID | U00096.3 |
| Organism | Escherichia coli (strain K12) |
| Left | 852869 |
| Right | 852997 |
| Strand | - |
| Nucleotide Sequence | ATGAATGAGTTCAAGAGGTGTATGCGCGTGTTTAGTCATTCTCCCTTTAAAGTACGGTTAATGCTGCTCTCTATGTTGTGCGATATGGTCAACAACAAACCGCAGCAAGATAAACCTTCCGATAAATAG |
| Sequence | MNEFKRCMRVFSHSPFKVRLMLLSMLCDMVNNKPQQDKPSDK |
| Source of smORF | Swiss-Prot |
| Function | Required for repression of mntH by MntR. May function as a chaperone that makes manganese more available by delivering it to the necessary cellular locations when manganese is limiting. {ECO:0000269|Pubmed:21908668}. |
| Pubmed ID | 9278503 16738553 21908668 21778229 |
| Domain | CDD:380222 |
| Functional Category | Others |
| Uniprot ID | P0DKB3 |
| ORF Length (Amino Acid) | 42 |
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| Conservation Analysis |
No. of Species: 57
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 977176 | 977304 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 2 | 852869 | 852997 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 3 | 796930 | 797058 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 4 | 2886811 | 2886939 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 5 | 845116 | 845244 | - | NZ_AP014857.1 | Escherichia albertii |
| 6 | 4488333 | 4488461 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 7 | 3077524 | 3077652 | - | NZ_LT556085.1 | Citrobacter amalonaticus |
| 8 | 1497244 | 1497372 | - | NZ_LR134340.1 | Escherichia marmotae |
| 9 | 3995989 | 3996117 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 10 | 901809 | 901937 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 11 | 93610 | 93738 | - | NZ_CP038469.1 | Citrobacter tructae |
| 12 | 732573 | 732701 | + | NZ_CP044098.1 | Citrobacter portucalensis |
| 13 | 2135500 | 2135628 | + | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 14 | 4379425 | 4379553 | - | NZ_CP033744.1 | Citrobacter freundii |
| 15 | 901960 | 902088 | - | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 16 | 3354603 | 3354728 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 17 | 3380987 | 3381115 | - | NZ_CP053416.1 | Salmonella bongori |
| 18 | 3586807 | 3586932 | + | NZ_LR134475.1 | Klebsiella aerogenes |
| 19 | 3146032 | 3146157 | + | NZ_CP045845.1 | Kluyvera intermedia |
| 20 | 1405523 | 1405651 | - | NC_015968.1 | Enterobacter soli |
| 21 | 3535460 | 3535585 | + | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 22 | 3976321 | 3976446 | + | NZ_CP036175.1 | Klebsiella huaxiensis |
| 23 | 1568093 | 1568218 | - | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 24 | 4156170 | 4156295 | + | NZ_CP060111.1 | Klebsiella michiganensis |
| 25 | 3756921 | 3757046 | + | NZ_CP054254.1 | Klebsiella variicola |
| 26 | 3149429 | 3149560 | + | NZ_CP035129.1 | Kosakonia cowanii |
| 27 | 1735055 | 1735180 | - | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 28 | 1546221 | 1546352 | - | NZ_CP015113.1 | Kosakonia radicincitans |
| 29 | 1642936 | 1643064 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 30 | 1438665 | 1438793 | - | NZ_CP027986.1 | Enterobacter sichuanensis |
| 31 | 1451157 | 1451285 | - | NZ_AP022508.1 | Enterobacter bugandensis |
| 32 | 3059729 | 3059854 | + | NZ_CP054058.1 | Scandinavium goeteborgense |
| 33 | 1470201 | 1470329 | - | NZ_CP009756.1 | Enterobacter cloacae |
| 34 | 628716 | 628847 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 35 | 1111158 | 1111286 | + | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 36 | 1400138 | 1400266 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 37 | 2066560 | 2066688 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 38 | 1453094 | 1453225 | + | NZ_CP045300.1 | Kosakonia arachidis |
| 39 | 349158 | 349286 | - | NZ_CP023529.1 | Lelliottia amnigena |
| 40 | 1540606 | 1540737 | - | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 41 | 1519124 | 1519255 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 42 | 3632208 | 3632333 | + | NZ_CP041247.1 | Raoultella electrica |
| 43 | 3450037 | 3450162 | - | NZ_CP026047.1 | Raoultella planticola |
| 44 | 3923486 | 3923611 | + | NZ_CP050508.1 | Raoultella terrigena |
| 45 | 3781238 | 3781363 | + | NZ_CP046672.1 | Raoultella ornithinolytica |
| 46 | 3971711 | 3971839 | - | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 47 | 2898709 | 2898837 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 48 | 4135935 | 4136063 | + | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 49 | 3014954 | 3015082 | + | NZ_AP023184.1 | Buttiauxella agrestis |
| 50 | 3141692 | 3141817 | + | NZ_LR134201.1 | Cedecea lapagei |
| 51 | 3042805 | 3042933 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 52 | 2707484 | 2707609 | - | NZ_CP020388.1 | Pluralibacter gergoviae |
| 53 | 2676613 | 2676741 | + | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 54 | 3360889 | 3361017 | + | NZ_CP023525.1 | Cedecea neteri |
| 55 | 1474915 | 1475049 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 56 | 2615861 | 2615995 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 57 | 1430345 | 1430479 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 58 | 1986884 | 1987018 | + | NZ_CP027107.1 | Cronobacter sakazakii |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00497.22 | 0.86 | 49 | 4870.5 | same-strand | Bacterial extracellular solute-binding proteins, family 3 |
| 2 | PF00210.26 | 1.0 | 57 | 3995.0 | same-strand | Ferritin-like domain |
| 3 | PF00892.22 | 1.0 | 57 | 2814.0 | same-strand | EamA-like transporter family |
| 4 | PF13505.8 | 1.0 | 57 | 1937.5 | opposite-strand | Outer membrane protein beta-barrel domain |
| 5 | PF00884.25 | 0.98 | 56 | 278 | same-strand | Sulfatase |
| 6 | PF01325.21 | 0.98 | 56 | 186 | opposite-strand | Iron dependent repressor, N-terminal DNA binding domain |
| 7 | PF03600.18 | 0.95 | 54 | 654 | opposite-strand | Citrate transporter |
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