Result : P0CV86

Protein Information

• Protein name: Uncharacterized protein Rv1954A
• NCBI Accession ID: AL123456.3
• Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
• Left: 2201277
• Right: 2201579
• Strand: +
• Nucleotide Sequence: ATGGCCAGGGGCAGGGTCGTGTGCATTGGGGATGCAGGTTGCGACTGTACACCCGGCGTGTTCCGCGCGACAGCGGGTGGGATGCCGGTGCTGGTGGTCATCGAGTCTGGGACAGGAGGTGATCAGATGGCTCGTAAAGCTACGTCCCCGGGTAAGCCGGCTCCGACGTCGGGACAGTATCGCCCGGTTGGCGGTGGCAACGAGGTGACCGTTCCGAAGGGACACCGTCTGCCTCCCTCGCCCAAGCCCGGTCAGAAGTGGGTGAACGTCGATCCGACGAAGAACAAGAGCGGCCGCGGCTGA
• Sequence: MARGRVVCIGDAGCDCTPGVFRATAGGMPVLVVIESGTGGDQMARKATSPGKPAPTSGQYRPVGGGNEVTVPKGHRLPPSPKPGQKWVNVDPTKNKSGRG
• Source of smORF: Swiss-Prot
• Pubmed ID: 9634230 19118359 20585061
• Functional Category: Others
• Uniprot ID: P0CV86
• ORF Length (Amino Acid): 100

Conservation Analysis

No. of Species: 2

Sr.No.	Left Position	Right Position	Strand	NCBI Accession id	Species Name
1	2201277	2201579	+	NC_000962.3	Mycobacterium tuberculosis H37Rv
2	2245286	2245588	+	NC_015848.1	Mycobacterium canettii CIPT 140010059

Neighborhood Conservation Analysis

^* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
^* 'Small ORF' represents the entry/query analyzed.
^* Image generated using 'gggenes'(R-Package).

Neighborhood Representative Chosen(Species): NC_000962.3

Sr.No.	Domain	Co-occurrence Frequency	No. of species in which domain occurs with smORF	Median distance b/w smORF and domain bearing ORFs	Orientation relative to smORF	PFAM Information
1	PF05973.16	1.0	2	152.0	same-strand	Phage derived protein Gp49-like (DUF891)
2	PF01381.24	1.0	2	559.0	same-strand	Helix-turn-helix
3	PF13560.8	1.0	2	559.0	same-strand	Helix-turn-helix domain
4	PF05016.17	1.0	2	2102.5	opposite-strand	ParE toxin of type II toxin-antitoxin system, parDE