Result : P0ADX0
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein YheV |
| NCBI Accession ID | AE005174.2 |
| Organism | Escherichia coli O157:H7 |
| Left | 4265720 |
| Right | 4265920 |
| Strand | - |
| Nucleotide Sequence | ATGGCAATCCGAAAACGTTTTATTGCGGGCGCAAAATGCCCGGCCTGTCAGGCGCAGGATTCAATGGCGATGTGGCGCGAAAATAATATTGATATTGTTGAATGCGTTAAGTGCGGACACCAGATGCGAGAAGCAGACAAAGAAGCCCGCGATCACGTTCGCAAAGATGAGCAAGTGATCGGGATTTTTCATCCGGACTAG |
| Sequence | MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMREADKEARDHVRKDEQVIGIFHPD |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl01410. Profile Description: Probable metal-binding protein (DUF2387). Members of this family are small proteins, about 70 residues in length, with a basic triplet near the N-terminus and a probable metal-binding motif CPXCX(18)CXXC. Members are found in various Proteobacteria. |
| Pubmed ID | 11206551 11258796 |
| Domain | CDD:412886 |
| Functional Category | Others |
| Uniprot ID | P0ADX0 |
| ORF Length (Amino Acid) | 66 |
++ More..
| Conservation Analysis |
No. of Species: 144
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 361429 | 361629 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 2 | 3478592 | 3478792 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 3 | 4198626 | 4198826 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 4 | 1268055 | 1268255 | - | NZ_CP026047.1 | Raoultella planticola |
| 5 | 3966668 | 3966868 | - | NZ_LR134340.1 | Escherichia marmotae |
| 6 | 2384775 | 2384975 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 7 | 393223 | 393423 | + | NZ_CP035129.1 | Kosakonia cowanii |
| 8 | 3008641 | 3008841 | - | NZ_CP023529.1 | Lelliottia amnigena |
| 9 | 3447869 | 3448069 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 10 | 4724224 | 4724424 | + | NC_013716.1 | Citrobacter rodentium ICC168 |
| 11 | 410167 | 410367 | + | NZ_CP041247.1 | Raoultella electrica |
| 12 | 448505 | 448705 | + | NZ_CP046672.1 | Raoultella ornithinolytica |
| 13 | 3439490 | 3439690 | - | NZ_AP014857.1 | Escherichia albertii |
| 14 | 446519 | 446719 | + | NZ_CP045845.1 | Kluyvera intermedia |
| 15 | 4191144 | 4191344 | - | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 16 | 411808 | 412008 | + | NZ_CP050508.1 | Raoultella terrigena |
| 17 | 2040070 | 2040270 | - | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 18 | 4214229 | 4214429 | - | NZ_AP022508.1 | Enterobacter bugandensis |
| 19 | 4039545 | 4039745 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 20 | 3815448 | 3815648 | + | NZ_CP038469.1 | Citrobacter tructae |
| 21 | 1167349 | 1167549 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 22 | 2708206 | 2708406 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 23 | 4458287 | 4458487 | - | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 24 | 1642274 | 1642474 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 25 | 40148 | 40348 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 26 | 4303087 | 4303287 | - | NZ_CP027986.1 | Enterobacter sichuanensis |
| 27 | 4411164 | 4411364 | - | NZ_CP009756.1 | Enterobacter cloacae |
| 28 | 2869717 | 2869917 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 29 | 4643294 | 4643494 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 30 | 438788 | 438988 | + | NZ_CP014007.2 | Kosakonia oryzae |
| 31 | 4885263 | 4885463 | - | NZ_CP015113.1 | Kosakonia radicincitans |
| 32 | 409883 | 410083 | + | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 33 | 4881144 | 4881344 | - | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 34 | 419423 | 419623 | + | NZ_CP054254.1 | Klebsiella variicola |
| 35 | 2992326 | 2992526 | + | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 36 | 3546414 | 3546614 | + | NZ_CP045300.1 | Kosakonia arachidis |
| 37 | 5127096 | 5127296 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 38 | 2817059 | 2817259 | + | NZ_CP044098.1 | Citrobacter portucalensis |
| 39 | 2265693 | 2265893 | - | NZ_CP033744.1 | Citrobacter freundii |
| 40 | 413715 | 413915 | + | NZ_LR134475.1 | Klebsiella aerogenes |
| 41 | 492607 | 492807 | + | NZ_CP060111.1 | Klebsiella michiganensis |
| 42 | 4307151 | 4307351 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 43 | 4321648 | 4321848 | - | NC_015968.1 | Enterobacter soli |
| 44 | 434721 | 434921 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 45 | 3607007 | 3607207 | - | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 46 | 966027 | 966227 | + | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 47 | 1457139 | 1457339 | - | NZ_CP053416.1 | Salmonella bongori |
| 48 | 531757 | 531957 | + | NZ_CP036175.1 | Klebsiella huaxiensis |
| 49 | 362001 | 362201 | + | NZ_CP054058.1 | Scandinavium goeteborgense |
| 50 | 4361949 | 4362149 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 51 | 3979209 | 3979409 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 52 | 3784632 | 3784832 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 53 | 211885 | 212085 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 54 | 65870 | 66070 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 55 | 4069082 | 4069282 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 56 | 298945 | 299145 | + | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 57 | 2103322 | 2103516 | + | NZ_CP042941.1 | Atlantibacter hermannii |
| 58 | 221042 | 221242 | + | NZ_CP023525.1 | Cedecea neteri |
| 59 | 225530 | 225730 | + | NZ_LR134201.1 | Cedecea lapagei |
| 60 | 3901856 | 3902056 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 61 | 726266 | 726466 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 62 | 443654 | 443848 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 63 | 3627715 | 3627909 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 64 | 453794 | 453988 | + | NZ_CP038853.1 | Pantoea vagans |
| 65 | 2461633 | 2461827 | - | NZ_CP049115.1 | Pantoea stewartii |
| 66 | 390100 | 390294 | + | NZ_CP061511.1 | Mixta calida |
| 67 | 380865 | 381065 | + | NZ_AP023184.1 | Buttiauxella agrestis |
| 68 | 444178 | 444372 | + | NC_017554.1 | Pantoea ananatis PA13 |
| 69 | 3542033 | 3542227 | - | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 70 | 303124 | 303318 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 71 | 4601194 | 4601388 | - | NC_014306.1 | Erwinia billingiae Eb661 |
| 72 | 464703 | 464897 | + | NZ_CP026377.1 | Mixta gaviniae |
| 73 | 3495434 | 3495628 | - | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 74 | 4213674 | 4213868 | + | NZ_CP028271.1 | Mixta intestinalis |
| 75 | 408633 | 408827 | + | NZ_LN907827.1 | Erwinia gerundensis |
| 76 | 1201384 | 1201578 | - | NZ_CP019706.1 | Pantoea alhagi |
| 77 | 92697 | 92891 | + | NZ_CP015581.1 | Tatumella citrea |
| 78 | 5024103 | 5024306 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 79 | 4393355 | 4393579 | - | NZ_CP032487.1 | Yersinia hibernica |
| 80 | 670021 | 670224 | - | NZ_CP023536.1 | Providencia alcalifaciens |
| 81 | 4821550 | 4821753 | - | NZ_LT906479.1 | Serratia ficaria |
| 82 | 4908032 | 4908235 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 83 | 1224593 | 1224760 | - | NZ_CP026364.1 | Proteus hauseri |
| 84 | 4952041 | 4952244 | - | NZ_LR134494.1 | Serratia quinivorans |
| 85 | 3678636 | 3678803 | - | NZ_CP060401.1 | Xenorhabdus nematophila |
| 86 | 2605079 | 2605294 | - | NZ_CP009787.1 | Yersinia rohdei |
| 87 | 321715 | 321936 | + | NZ_CP011118.1 | Yersinia enterocolitica |
| 88 | 424623 | 424826 | + | NZ_LS483422.1 | Providencia heimbachae |
| 89 | 3609601 | 3609768 | - | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 90 | 451526 | 451729 | + | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 91 | 1329984 | 1330187 | - | NZ_CP011254.1 | Serratia fonticola |
| 92 | 2888254 | 2888421 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 93 | 1553174 | 1553392 | + | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 94 | 126116 | 126337 | + | NZ_CP046293.1 | Yersinia intermedia |
| 95 | 448711 | 448914 | - | NZ_CP029736.1 | Providencia rettgeri |
| 96 | 4379245 | 4379469 | - | NZ_CP043727.1 | Yersinia canariae |
| 97 | 361383 | 361586 | + | NC_012962.1 | Photorhabdus asymbiotica |
| 98 | 2992700 | 2992918 | + | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 99 | 3075908 | 3076111 | - | NC_010554.1 | Proteus mirabilis HI4320 |
| 100 | 4194082 | 4194285 | + | NZ_CP031123.2 | Providencia huaxiensis |
| 101 | 3109832 | 3110035 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 102 | 3875596 | 3875799 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 103 | 2510768 | 2510971 | + | NZ_CP011078.1 | Yersinia ruckeri |
| 104 | 3640251 | 3640454 | + | NZ_CP016176.1 | Xenorhabdus hominickii |
| 105 | 325385 | 325552 | + | NZ_CP071320.1 | Serratia ureilytica |
| 106 | 4089130 | 4089297 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 107 | 4861057 | 4861224 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 108 | 3923796 | 3923999 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 109 | 375274 | 375477 | + | NZ_CP048796.1 | Providencia vermicola |
| 110 | 1502632 | 1502835 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 111 | 1130167 | 1130370 | - | NZ_CP065640.1 | Serratia rubidaea |
| 112 | 296931 | 297128 | + | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 113 | 4270599 | 4270793 | - | NZ_CP050150.1 | Hafnia alvei |
| 114 | 347657 | 347824 | + | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 115 | 1279184 | 1279405 | - | NZ_CP007230.1 | Yersinia similis |
| 116 | 1371068 | 1371271 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 117 | 4004650 | 4004817 | + | NZ_CP067057.1 | Rahnella aceris |
| 118 | 436288 | 436491 | + | NC_003910.7 | Colwellia psychrerythraea 34H |
| 119 | 2084060 | 2084263 | - | NZ_CP034759.1 | Litorilituus sediminis |
| 120 | 500548 | 500754 | + | NZ_CP072844.1 | Psychrosphaera aestuarii |
| 121 | 134020 | 134223 | + | NZ_CP027523.1 | Pseudoalteromonas carrageenovora |
| 122 | 134894 | 135088 | + | NZ_CP034035.1 | Brenneria rubrifaciens |
| 123 | 2561810 | 2562010 | - | NZ_CP033078.1 | Vibrio zhugei |
| 124 | 3456703 | 3456906 | - | NZ_CP033065.1 | Pseudoalteromonas agarivorans |
| 125 | 3515796 | 3515999 | - | NZ_CP023464.1 | Pseudoalteromonas atlantica |
| 126 | 3541262 | 3541465 | - | NZ_CP011028.1 | Pseudoalteromonas espejiana DSM 9414 |
| 127 | 1676572 | 1676775 | - | NZ_CP019628.1 | Pseudoalteromonas aliena |
| 128 | 139823 | 140026 | + | NZ_CP011025.1 | Pseudoalteromonas arctica A 37-1-2 |
| 129 | 3130187 | 3130387 | - | NZ_AP014635.1 | Vibrio tritonius |
| 130 | 2716718 | 2716912 | - | NZ_CP016414.1 | Vibrio scophthalmi |
| 131 | 3169883 | 3170077 | + | NZ_AP019657.1 | Vibrio ponticus |
| 132 | 465772 | 465975 | + | NZ_CP006569.1 | Sodalis praecaptivus |
| 133 | 95746 | 95952 | - | NZ_CP029347.1 | Saliniradius amylolyticus |
| 134 | 4786324 | 4786518 | + | NZ_CP014137.1 | Brenneria goodwinii |
| 135 | 240945 | 241139 | + | NZ_CP009354.1 | Vibrio tubiashii ATCC 19109 |
| 136 | 3352783 | 3352980 | - | NZ_CP037951.1 | Parashewanella tropica |
| 137 | 2474449 | 2474643 | + | NZ_CP020465.1 | Cognaticolwellia beringensis |
| 138 | 474557 | 474751 | + | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 139 | 2730245 | 2730439 | - | NZ_AP019651.1 | Vibrio taketomensis |
| 140 | 291300 | 291503 | + | NZ_CP040021.1 | Salinivibrio kushneri |
| 141 | 2474701 | 2474901 | - | NZ_CP022741.1 | Vibrio qinghaiensis |
| 142 | 988698 | 988907 | - | NZ_CP014056.2 | Grimontia hollisae |
| 143 | 4188282 | 4188479 | - | NZ_CP020472.1 | Shewanella japonica |
| 144 | 4426198 | 4426392 | - | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 145 | 4254542 | 4254736 | - | NZ_CP038498.1 | Pectobacterium punjabense |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000913.3
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00005.29 | 1.0 | 144 | 2517 | opposite-strand | ABC transporter |
| 2 | PF12848.9 | 1.0 | 144 | 2515 | opposite-strand | ABC transporter |
| 3 | PF16326.7 | 0.95 | 137 | 2521.0 | opposite-strand | ABC transporter C-terminal domain |
| 4 | PF02525.19 | 0.88 | 126 | 1819 | same-strand | Flavodoxin-like fold |
| 5 | PF02254.20 | 0.88 | 127 | 14.0 | same-strand | TrkA-N domain |
| 6 | PF00254.30 | 0.98 | 141 | 686.5 | same-strand | FKBP-type peptidyl-prolyl cis-trans isomerase |
| 7 | PF04102.14 | 0.93 | 134 | 779 | opposite-strand | SlyX |
| 8 | PF01346.20 | 0.9 | 130 | 1279 | same-strand | Domain amino terminal to FKBP-type peptidyl-prolyl isomerase |
| 9 | PF08348.13 | 0.79 | 114 | 2322 | same-strand | YheO-like PAS domain |
| 10 | PF13309.8 | 0.79 | 114 | 2325 | same-strand | HTH domain |
| 11 | PF13384.8 | 0.75 | 108 | 2320 | same-strand | Homeodomain-like domain |
| 12 | PF02635.17 | 0.76 | 109 | 3044.0 | same-strand | DsrE/DsrF-like family |
| 13 | PF00999.23 | 0.87 | 125 | 14.0 | same-strand | Sodium/hydrogen exchanger family |
++ More..