Result : P0ADD1
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein YjiX |
| NCBI Accession ID | AE005674.2 |
| Organism | Shigella flexneri |
| Left | 4543075 |
| Right | 4543278 |
| Strand | - |
| Nucleotide Sequence | ATGTTTGGTAACTTAGGACAGGCAAAAAAATATCTCGGCCAGGCGGCGAAGATGTTGATTGGTATTCCAGACTACGACAACTACGTCGAGCATATGAAGACCAACCATCCCGACAAGCCGTACATGAGCTATGAAGAATTCTTCCGCGAACGCCAGAACGCGCGCTACGGCGGCGATGGTAAAGGCGGTATGCGCTGTTGTTAA |
| Sequence | MFGNLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSYEEFFRERQNARYGGDGKGGMRCC |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl01082. Profile Description: Selenoprotein, putative. This family is named KCU-star because nearly all member proteins end with tripeptide lysine-cysteine-selenocysteine, followed immediately by a stop codon (represented by an asterisk, or star). Members occur in primarily in species of Helicobacter (although not Helicobacter pylori, in which selenocysteine incorporation capability has been lost) and Campylobacter. This small family belongs the larger YbdD/YjiX (DUF466) family described by Pfam model PF04328. |
| Pubmed ID | 12384590 12704152 |
| Domain | CDD:412734 |
| Functional Category | Others |
| Uniprot ID | P0ADD1 |
| ORF Length (Amino Acid) | 67 |
++ More..
| Conservation Analysis |
No. of Species: 297
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 571711 | 571914 | - | NZ_LR134340.1 | Escherichia marmotae |
| 2 | 1273534 | 1273731 | + | NZ_LR134340.1 | Escherichia marmotae |
| 3 | 3667065 | 3667268 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 4 | 3096877 | 3097074 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 5 | 2181991 | 2182194 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 6 | 1541111 | 1541308 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 7 | 4543075 | 4543278 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 8 | 535544 | 535741 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 9 | 4588876 | 4589079 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 10 | 632182 | 632379 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 11 | 5446667 | 5446870 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 12 | 713652 | 713849 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 13 | 4606932 | 4607135 | - | NZ_AP014857.1 | Escherichia albertii |
| 14 | 605920 | 606117 | + | NZ_AP014857.1 | Escherichia albertii |
| 15 | 3210396 | 3210599 | + | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 16 | 2363186 | 2363383 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 17 | 414652 | 414855 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 18 | 2849020 | 2849217 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 19 | 1316354 | 1316557 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 20 | 4264373 | 4264570 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 21 | 5198517 | 5198720 | + | NZ_CP036175.1 | Klebsiella huaxiensis |
| 22 | 4265418 | 4265615 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 23 | 368423 | 368626 | - | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 24 | 851045 | 851242 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 25 | 4553680 | 4553883 | + | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 26 | 3768413 | 3768610 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 27 | 4022769 | 4022972 | + | NZ_CP045845.1 | Kluyvera intermedia |
| 28 | 3323128 | 3323325 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 29 | 4787285 | 4787488 | - | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 30 | 663446 | 663643 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 31 | 4633882 | 4634085 | + | NZ_CP014007.2 | Kosakonia oryzae |
| 32 | 3887330 | 3887527 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 33 | 5302495 | 5302698 | + | NZ_CP060111.1 | Klebsiella michiganensis |
| 34 | 4408140 | 4408337 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 35 | 5106217 | 5106420 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 36 | 674141 | 674338 | + | NC_013716.1 | Citrobacter rodentium ICC168 |
| 37 | 2401996 | 2402199 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 38 | 1747426 | 1747623 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 39 | 671632 | 671835 | - | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 40 | 1315581 | 1315778 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 41 | 515851 | 516054 | - | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 42 | 1028665 | 1028862 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 43 | 3980458 | 3980661 | + | NZ_CP054058.1 | Scandinavium goeteborgense |
| 44 | 3263269 | 3263466 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 45 | 4529562 | 4529765 | + | NZ_LR134475.1 | Klebsiella aerogenes |
| 46 | 3783193 | 3783390 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 47 | 4012406 | 4012609 | + | NZ_CP035129.1 | Kosakonia cowanii |
| 48 | 3372003 | 3372200 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 49 | 662538 | 662741 | - | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 50 | 1510021 | 1510218 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 51 | 4841703 | 4841906 | + | NZ_CP054254.1 | Klebsiella variicola |
| 52 | 4024584 | 4024781 | - | NZ_CP054254.1 | Klebsiella variicola |
| 53 | 3681751 | 3681954 | + | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 54 | 3151447 | 3151644 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 55 | 2411960 | 2412163 | + | NZ_CP045300.1 | Kosakonia arachidis |
| 56 | 1682503 | 1682700 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 57 | 453970 | 454173 | - | NZ_CP015113.1 | Kosakonia radicincitans |
| 58 | 1324780 | 1324977 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 59 | 4563345 | 4563548 | + | NZ_CP041247.1 | Raoultella electrica |
| 60 | 3828302 | 3828499 | - | NZ_CP041247.1 | Raoultella electrica |
| 61 | 4809821 | 4810024 | + | NZ_CP046672.1 | Raoultella ornithinolytica |
| 62 | 3999962 | 4000159 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 63 | 3769173 | 3769376 | + | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 64 | 3224681 | 3224878 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 65 | 2428821 | 2429024 | - | NZ_CP026047.1 | Raoultella planticola |
| 66 | 3219419 | 3219616 | + | NZ_CP026047.1 | Raoultella planticola |
| 67 | 4081140 | 4081343 | - | NZ_CP027107.1 | Cronobacter sakazakii |
| 68 | 300022 | 300219 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 69 | 5202043 | 5202246 | + | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 70 | 4338658 | 4338855 | - | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 71 | 3592094 | 3592297 | + | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 72 | 3087848 | 3088045 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 73 | 637188 | 637391 | - | NZ_CP009756.1 | Enterobacter cloacae |
| 74 | 1274374 | 1274571 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 75 | 647734 | 647937 | - | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 76 | 1358753 | 1358950 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 77 | 613482 | 613685 | - | NZ_AP022508.1 | Enterobacter bugandensis |
| 78 | 1255052 | 1255249 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 79 | 719967 | 720170 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 80 | 1447530 | 1447727 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 81 | 3132429 | 3132632 | - | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 82 | 3761489 | 3761686 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 83 | 1913992 | 1914195 | + | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 84 | 1308875 | 1309072 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 85 | 592517 | 592720 | - | NZ_CP027986.1 | Enterobacter sichuanensis |
| 86 | 1251419 | 1251616 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 87 | 2945035 | 2945238 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 88 | 2275116 | 2275313 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 89 | 3739770 | 3739973 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 90 | 439191 | 439388 | + | NZ_CP017279.1 | Enterobacter ludwigii |
| 91 | 4167554 | 4167757 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 92 | 4042185 | 4042388 | - | NZ_CP023529.1 | Lelliottia amnigena |
| 93 | 158495 | 158692 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 94 | 605162 | 605365 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 95 | 1205561 | 1205758 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 96 | 561773 | 561976 | - | NC_015968.1 | Enterobacter soli |
| 97 | 1198979 | 1199176 | + | NC_015968.1 | Enterobacter soli |
| 98 | 2541189 | 2541392 | - | NZ_CP053416.1 | Salmonella bongori |
| 99 | 3152844 | 3153041 | + | NZ_CP053416.1 | Salmonella bongori |
| 100 | 3922047 | 3922250 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 101 | 3093535 | 3093732 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 102 | 3517640 | 3517843 | + | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 103 | 2476721 | 2476924 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 104 | 3253248 | 3253451 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 105 | 4911946 | 4912149 | + | NZ_CP050508.1 | Raoultella terrigena |
| 106 | 4136671 | 4136868 | - | NZ_CP050508.1 | Raoultella terrigena |
| 107 | 2874084 | 2874287 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 108 | 3687029 | 3687232 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 109 | 596460 | 596663 | + | NZ_CP015749.1 | Pectobacterium parmentieri |
| 110 | 312585 | 312788 | - | NZ_CP047495.1 | Pectobacterium brasiliense |
| 111 | 3514693 | 3514896 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 112 | 1329966 | 1330169 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 113 | 3232694 | 3232897 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 114 | 463835 | 464038 | - | NZ_LR134531.1 | Pragia fontium |
| 115 | 1452377 | 1452571 | - | NZ_LR134531.1 | Pragia fontium |
| 116 | 2547105 | 2547308 | - | NZ_CP011254.1 | Serratia fonticola |
| 117 | 1358307 | 1358510 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 118 | 2108504 | 2108707 | - | NZ_CP065640.1 | Serratia rubidaea |
| 119 | 572340 | 572543 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 120 | 4509400 | 4509603 | + | NZ_CP071320.1 | Serratia ureilytica |
| 121 | 4990133 | 4990336 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 122 | 655961 | 656164 | - | NZ_LT906479.1 | Serratia ficaria |
| 123 | 552766 | 552969 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 124 | 525670 | 525873 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 125 | 554344 | 554547 | - | NZ_LR134494.1 | Serratia quinivorans |
| 126 | 588585 | 588788 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 127 | 650889 | 651092 | - | NZ_LS483470.1 | Leminorella richardii |
| 128 | 2346305 | 2346499 | + | NZ_LS483470.1 | Leminorella richardii |
| 129 | 4225947 | 4226150 | + | NZ_CP016176.1 | Xenorhabdus hominickii |
| 130 | 3524698 | 3524901 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 131 | 1416419 | 1416622 | + | NZ_CP034938.1 | Pectobacterium odoriferum |
| 132 | 3715002 | 3715205 | - | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 133 | 1046829 | 1047032 | + | NZ_CP034035.1 | Brenneria rubrifaciens |
| 134 | 166128 | 166331 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 135 | 2650689 | 2650892 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 136 | 300383 | 300586 | + | NZ_CP067059.1 | Rahnella aceris |
| 137 | 1107926 | 1108129 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 138 | 3541601 | 3541804 | - | NZ_CP025799.1 | Dickeya zeae |
| 139 | 2734202 | 2734405 | + | NZ_CP023525.1 | Cedecea neteri |
| 140 | 3762825 | 3763022 | - | NZ_CP023525.1 | Cedecea neteri |
| 141 | 408846 | 409049 | - | NZ_CP015581.1 | Tatumella citrea |
| 142 | 946240 | 946443 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 143 | 3730579 | 3730782 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 144 | 3986718 | 3986921 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 145 | 3442437 | 3442640 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 146 | 1096376 | 1096579 | + | NC_012880.1 | Musicola paradisiaca Ech703 |
| 147 | 2839736 | 2839939 | + | NZ_CP029822.1 | Entomomonas moraniae |
| 148 | 3779787 | 3779990 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 149 | 2486940 | 2487143 | + | NZ_LR134201.1 | Cedecea lapagei |
| 150 | 3418424 | 3418621 | - | NZ_LR134201.1 | Cedecea lapagei |
| 151 | 3281252 | 3281455 | + | NZ_CP023009.1 | Lonsdalea britannica |
| 152 | 1673636 | 1673830 | + | NZ_CP044098.1 | Citrobacter portucalensis |
| 153 | 959198 | 959395 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 154 | 3382617 | 3382811 | - | NZ_CP033744.1 | Citrobacter freundii |
| 155 | 4157495 | 4157692 | + | NZ_CP033744.1 | Citrobacter freundii |
| 156 | 2730215 | 2730409 | + | NZ_CP038469.1 | Citrobacter tructae |
| 157 | 2013193 | 2013390 | - | NZ_CP038469.1 | Citrobacter tructae |
| 158 | 557828 | 558031 | - | NZ_CP029185.2 | Limnobaculum parvum |
| 159 | 2033601 | 2033804 | + | NZ_CP065534.1 | Lonsdalea populi |
| 160 | 4208099 | 4208302 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 161 | 3548025 | 3548222 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 162 | 562797 | 563000 | - | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 163 | 2423620 | 2423814 | + | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 164 | 4023171 | 4023374 | - | NZ_CP029736.1 | Providencia rettgeri |
| 165 | 1444947 | 1445144 | - | NZ_CP029736.1 | Providencia rettgeri |
| 166 | 2740625 | 2740828 | - | NZ_CP031123.2 | Providencia huaxiensis |
| 167 | 3143361 | 3143558 | + | NZ_CP031123.2 | Providencia huaxiensis |
| 168 | 938051 | 938254 | + | NZ_LT615367.1 | Dickeya aquatica |
| 169 | 1139837 | 1140040 | + | NZ_LS483422.1 | Providencia heimbachae |
| 170 | 3613813 | 3614010 | + | NZ_LS483422.1 | Providencia heimbachae |
| 171 | 568206 | 568409 | - | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 172 | 5377068 | 5377271 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 173 | 1142529 | 1142732 | + | NZ_CP048796.1 | Providencia vermicola |
| 174 | 3757501 | 3757698 | + | NZ_CP048796.1 | Providencia vermicola |
| 175 | 938493 | 938690 | + | NZ_CP071706.1 | Pseudomonas donghuensis |
| 176 | 588298 | 588501 | - | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 177 | 2468422 | 2468619 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 178 | 5942034 | 5942231 | - | NZ_LS999205.1 | Pseudomonas protegens CHA0 |
| 179 | 836678 | 836875 | + | NC_008027.1 | Pseudomonas entomophila L48 |
| 180 | 1956199 | 1956402 | + | NZ_CP023536.1 | Providencia alcalifaciens |
| 181 | 1544801 | 1545004 | - | NZ_CP023536.1 | Providencia alcalifaciens |
| 182 | 2362059 | 2362265 | + | NZ_CP026364.1 | Proteus hauseri |
| 183 | 4938038 | 4938235 | - | NZ_CP024159.1 | Pseudomonas mosselii |
| 184 | 761135 | 761341 | + | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 185 | 178215 | 178421 | + | NC_010554.1 | Proteus mirabilis HI4320 |
| 186 | 1082157 | 1082354 | - | NZ_CP048810.1 | Pseudomonas bijieensis |
| 187 | 5121810 | 5122007 | + | NZ_CP048810.1 | Pseudomonas bijieensis |
| 188 | 5892605 | 5892802 | + | NZ_CP009365.1 | Pseudomonas soli |
| 189 | 5313486 | 5313692 | - | NZ_CP047698.1 | Pseudomonas knackmussii |
| 190 | 5150704 | 5150901 | - | NZ_CP007039.1 | Pseudomonas cichorii JBC1 |
| 191 | 3011406 | 3011603 | + | NZ_CP042941.1 | Atlantibacter hermannii |
| 192 | 801852 | 802049 | + | NZ_CP062158.2 | Pseudomonas lundensis |
| 193 | 2364593 | 2364796 | + | NZ_CP043311.1 | Pseudomonas lalkuanensis |
| 194 | 856234 | 856437 | + | NZ_CP043311.1 | Pseudomonas lalkuanensis |
| 195 | 63239 | 63436 | + | NZ_CP012676.1 | Pseudomonas versuta |
| 196 | 1395323 | 1395520 | + | NZ_CP049044.1 | Pseudomonas psychrophila |
| 197 | 5011659 | 5011856 | - | NZ_CP046621.1 | Pseudomonas alkylphenolica |
| 198 | 2613489 | 2613686 | - | NZ_CP031146.1 | Pseudomonas plecoglossicida |
| 199 | 4968431 | 4968628 | - | NZ_CP022562.1 | Pseudomonas monteilii |
| 200 | 4815883 | 4816080 | + | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 201 | 577460 | 577657 | - | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 202 | 962740 | 962940 | - | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 203 | 2851272 | 2851469 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 204 | 5776863 | 5777060 | - | NZ_CP035088.1 | Pseudomonas viciae |
| 205 | 3042136 | 3042333 | + | NZ_CP035088.1 | Pseudomonas viciae |
| 206 | 190914 | 191111 | + | NZ_CP014262.1 | Pseudomonas corrugata |
| 207 | 2648394 | 2648591 | - | NZ_CP014262.1 | Pseudomonas corrugata |
| 208 | 5995112 | 5995309 | - | NZ_CP051487.1 | Pseudomonas umsongensis |
| 209 | 2945272 | 2945469 | + | NZ_CP051487.1 | Pseudomonas umsongensis |
| 210 | 4043966 | 4044166 | - | NZ_CP051487.1 | Pseudomonas umsongensis |
| 211 | 1006616 | 1006819 | - | NZ_CP011835.1 | Azotobacter chroococcum |
| 212 | 5163536 | 5163739 | - | NC_002516.2 | Pseudomonas aeruginosa PAO1 |
| 213 | 845415 | 845612 | + | NC_021505.1 | Pseudomonas putida NBRC 14164 |
| 214 | 5574816 | 5575013 | - | NZ_CP056030.1 | Pseudomonas eucalypticola |
| 215 | 5834781 | 5834978 | - | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 216 | 3176043 | 3176240 | + | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 217 | 4366106 | 4366303 | + | NZ_CP009533.1 | Pseudomonas rhizosphaerae |
| 218 | 990720 | 990917 | + | NZ_CP070503.1 | Pseudomonas atacamensis |
| 219 | 5443284 | 5443481 | - | NZ_CP029608.1 | Pseudomonas kribbensis |
| 220 | 5808178 | 5808375 | - | NZ_CP014205.2 | Pseudomonas glycinae |
| 221 | 5643219 | 5643416 | - | NZ_CP062253.1 | Pseudomonas gozinkensis |
| 222 | 5664206 | 5664403 | - | NZ_CP062252.1 | Pseudomonas allokribbensis |
| 223 | 284681 | 284878 | - | NZ_CP007445.1 | Gilliamella apicola |
| 224 | 3377612 | 3377815 | - | NZ_AP014862.1 | Pseudomonas furukawaii |
| 225 | 5922779 | 5922976 | - | NZ_CP061079.1 | Pseudomonas chlororaphis |
| 226 | 700934 | 701131 | + | NZ_CP014870.1 | Pseudomonas silesiensis |
| 227 | 2511279 | 2511476 | + | NZ_CP014870.1 | Pseudomonas silesiensis |
| 228 | 2863734 | 2863934 | + | NZ_CP014870.1 | Pseudomonas silesiensis |
| 229 | 4135448 | 4135651 | - | NC_012560.1 | Azotobacter vinelandii DJ |
| 230 | 195047 | 195244 | - | NZ_CP040449.1 | Aeromonas simiae |
| 231 | 1668257 | 1668460 | - | NZ_CP045302.1 | Azotobacter salinestris |
| 232 | 6089726 | 6089929 | - | NZ_CP014158.1 | Pseudomonas citronellolis |
| 233 | 554134 | 554331 | + | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 234 | 2763227 | 2763424 | - | NZ_CP023706.1 | Edwardsiella tarda |
| 235 | 781983 | 782180 | + | NZ_CP067022.1 | Pseudomonas cannabina pv. alisalensis |
| 236 | 5143335 | 5143532 | - | NZ_CP042804.1 | Pseudomonas amygdali pv. tabaci str. ATCC 11528 |
| 237 | 1098748 | 1098951 | + | NZ_AP022642.1 | Pseudomonas otitidis |
| 238 | 3322725 | 3322922 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 239 | 5073518 | 5073715 | - | NZ_CP068034.2 | Pseudomonas syringae |
| 240 | 5240240 | 5240437 | - | NC_004578.1 | Pseudomonas syringae pv. tomato str. DC3000 |
| 241 | 5270840 | 5271034 | + | NZ_CP059560.1 | Aromatoleum petrolei |
| 242 | 2114889 | 2115086 | + | NZ_CP009056.1 | Frischella perrara |
| 243 | 2683663 | 2683860 | + | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 244 | 1076178 | 1076375 | - | NZ_CP016043.1 | Edwardsiella hoshinae |
| 245 | 5142601 | 5142798 | - | NZ_CP054205.1 | Pseudomonas rhodesiae |
| 246 | 5249954 | 5250151 | - | NZ_CP023272.1 | Pseudomonas lurida |
| 247 | 2766311 | 2766487 | + | NZ_CP023272.1 | Pseudomonas lurida |
| 248 | 5283802 | 5283999 | - | NZ_CP010896.1 | Pseudomonas simiae |
| 249 | 5656834 | 5657031 | - | NZ_CP027756.1 | Pseudomonas synxantha |
| 250 | 6004681 | 6004878 | - | NZ_CP018420.1 | Pseudomonas veronii |
| 251 | 5073820 | 5074017 | - | NZ_CP027723.1 | Pseudomonas orientalis |
| 252 | 625862 | 626059 | + | NZ_CP012400.2 | Pseudomonas yamanorum |
| 253 | 1457043 | 1457240 | + | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 254 | 210776 | 210973 | + | NZ_CP047385.1 | Pandoraea fibrosis |
| 255 | 1535803 | 1536006 | + | NZ_CP048833.1 | Pseudomonas multiresinivorans |
| 256 | 460959 | 461156 | + | NZ_LR134376.1 | Aeromonas encheleia |
| 257 | 185046 | 185243 | - | NZ_CP005961.1 | Pseudomonas mandelii JR-1 |
| 258 | 6028930 | 6029127 | - | NZ_CP019038.1 | Massilia putida |
| 259 | 174408 | 174617 | + | NZ_CP010310.2 | Pandoraea pulmonicola |
| 260 | 2929265 | 2929468 | + | NZ_CP022579.1 | Oryzomicrobium terrae |
| 261 | 5326616 | 5326813 | - | NZ_CP013481.2 | Pandoraea apista |
| 262 | 142129 | 142326 | + | NC_023018.2 | Pandoraea pnomenusa |
| 263 | 161134 | 161331 | + | NZ_LT906435.1 | Pandoraea sputorum |
| 264 | 184122 | 184319 | + | NZ_CP010897.2 | Pandoraea vervacti |
| 265 | 91119 | 91313 | + | NC_021294.1 | Caballeronia insecticola |
| 266 | 1449719 | 1449916 | - | NC_016043.1 | Taylorella asinigenitalis MCE3 |
| 267 | 309236 | 309442 | - | NZ_CP009556.1 | Burkholderia oklahomensis C6786 |
| 268 | 147679 | 147876 | + | NZ_CP011807.3 | Pandoraea faecigallinarum |
| 269 | 1324556 | 1324756 | - | NZ_CP017111.1 | Sulfurospirillum halorespirans DSM 13726 |
| 270 | 131549 | 131746 | + | NZ_CP011253.3 | Pandoraea oxalativorans |
| 271 | 1772062 | 1772271 | + | NZ_CP060783.1 | Diaphorobacter aerolatus |
| 272 | 5804027 | 5804227 | - | NZ_CP046904.1 | Massilia flava |
| 273 | 1744777 | 1744977 | - | NZ_AP014724.1 | Sulfurospirillum cavolei |
| 274 | 1337022 | 1337204 | - | NZ_CP049135.1 | Paraburkholderia tropica |
| 275 | 193308 | 193505 | + | NZ_CP013480.3 | Pandoraea norimbergensis |
| 276 | 2460226 | 2460426 | - | NZ_CP028324.1 | Massilia armeniaca |
| 277 | 1184069 | 1184266 | + | NZ_CP053986.1 | Achromobacter denitrificans |
| 278 | 2764443 | 2764649 | - | NC_007650.1 | Burkholderia thailandensis E264 |
| 279 | 2869474 | 2869680 | + | NZ_CP008782.1 | Burkholderia pseudomallei |
| 280 | 4815195 | 4815395 | + | NZ_CP036401.1 | Massilia albidiflava |
| 281 | 6926951 | 6927151 | - | NZ_CP040017.1 | Massilia umbonata |
| 282 | 1204180 | 1204380 | + | NC_013512.1 | Sulfurospirillum deleyianum DSM 6946 |
| 283 | 115550 | 115756 | - | NZ_CP009831.1 | Burkholderia multivorans ATCC BAA-247 |
| 284 | 1476909 | 1477106 | - | NZ_CP021060.1 | Taylorella equigenitalis |
| 285 | 2162767 | 2162973 | + | NZ_CP009793.1 | Burkholderia dolosa AU0158 |
| 286 | 2049199 | 2049405 | + | NZ_CP046910.1 | Paraburkholderia acidiphila |
| 287 | 2495407 | 2495613 | + | NZ_CP021106.3 | Nitrosospira lacus |
| 288 | 4100159 | 4100359 | + | NZ_HG322949.1 | Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 |
| 289 | 106147 | 106353 | + | NC_007511.1 | Burkholderia lata |
| 290 | 4209990 | 4210187 | - | NZ_CP016440.1 | Bordetella pseudohinzii |
| 291 | 1076934 | 1077134 | + | NC_014315.1 | Nitrosococcus watsonii C-113 |
| 292 | 5413449 | 5413649 | - | NZ_CP013232.1 | Collimonas fungivorans |
| 293 | 5445470 | 5445670 | - | NZ_CP013236.1 | Collimonas pratensis |
| 294 | 2455860 | 2456060 | + | NZ_CP019236.1 | Rhodoferax koreense |
| 295 | 170110 | 170310 | - | NZ_CP012371.1 | Nitrosospira briensis C-128 |
| 296 | 401988 | 402161 | - | NZ_CP012371.1 | Nitrosospira briensis C-128 |
| 297 | 4587791 | 4587991 | - | NZ_CP013235.1 | Collimonas arenae |
| 298 | 2965901 | 2966107 | - | NZ_CP013452.1 | Burkholderia cenocepacia |
| 299 | 1281458 | 1281664 | + | NZ_CP011504.1 | Burkholderia pyrrocinia |
| 300 | 2893738 | 2893944 | + | NZ_CP045236.1 | Burkholderia cepacia |
| 301 | 2950608 | 2950814 | - | NZ_CP013400.1 | Burkholderia seminalis |
| 302 | 7037587 | 7037808 | + | NZ_CP024608.1 | Massilia violaceinigra |
| 303 | 1453465 | 1453665 | - | NC_007614.1 | Nitrosospira multiformis ATCC 25196 |
| 304 | 2900067 | 2900273 | - | NZ_CP013461.1 | Burkholderia stagnalis |
| 305 | 1347097 | 1347294 | - | NZ_CP021395.1 | Bordetella hinzii |
| 306 | 2872219 | 2872425 | - | NZ_CP013403.1 | Burkholderia metallica |
| 307 | 2905507 | 2905713 | - | NZ_CP013416.1 | Burkholderia ubonensis |
| 308 | 3791488 | 3791682 | - | NZ_CP032519.1 | Cupriavidus oxalaticus |
| 309 | 3242931 | 3243137 | - | NZ_CP020738.1 | Paraburkholderia acidophila |
| 310 | 2051077 | 2051277 | - | NZ_CP048832.1 | Janthinobacterium lividum |
| 311 | 3646735 | 3646932 | - | NZ_CP038034.1 | Achromobacter insolitus |
| 312 | 3402133 | 3402306 | - | NZ_CP054626.1 | Cupriavidus gilardii |
| 313 | 2221961 | 2222176 | + | NZ_CP011930.1 | Herbaspirillum seropedicae |
| 314 | 630462 | 630656 | + | NZ_CP011451.1 | Nitrosomonas communis |
| 315 | 3504623 | 3504820 | - | NZ_CP043146.1 | Bordetella holmesii |
| 316 | 1054192 | 1054374 | + | NC_010625.1 | Paraburkholderia phymatum STM815 |
| 317 | 3220796 | 3220984 | + | NZ_CP028127.1 | Xanthomonas vasicola pv. vasculorum |
| 318 | 3651758 | 3651964 | - | NZ_CP002581.1 | Burkholderia plantarii |
| 319 | 3997775 | 3997969 | - | NZ_CP039287.1 | Cupriavidus necator H16 |
| 320 | 1350821 | 1351009 | - | NZ_LT853882.1 | Xanthomonas fragariae |
| 321 | 2128596 | 2128781 | + | NZ_CP013737.1 | Herbaspirillum rubrisubalbicans M1 |
| 322 | 92431 | 92619 | - | NZ_CP016878.1 | Xanthomonas hortorum |
| 323 | 4429589 | 4429783 | - | NZ_CP062803.1 | Cupriavidus basilensis |
| 324 | 422379 | 422573 | + | NZ_CP068285.1 | Ralstonia syzygii subsp. celebesensis |
| 325 | 2523824 | 2524021 | + | NZ_CP043046.1 | Pigmentiphaga aceris |
| 326 | 3776617 | 3776823 | - | NZ_LT907988.1 | Orrella dioscoreae |
| 327 | 1004610 | 1004792 | - | NZ_CP026113.1 | Paraburkholderia terrae |
| 328 | 2227170 | 2227355 | + | NZ_CP037993.1 | Herbaspirillum huttiense |
| 329 | 5897852 | 5898052 | - | NZ_CP041185.1 | Janthinobacterium tructae |
| 330 | 2132191 | 2132391 | - | NZ_CP023422.1 | Janthinobacterium svalbardensis |
| 331 | 714047 | 714262 | + | NZ_LN832562.1 | Paracoccus aminovorans |
| 332 | 322595 | 322792 | + | NC_017584.1 | Rhodospirillum rubrum F11 |
| 333 | 117765 | 117932 | - | NC_014664.1 | Rhodomicrobium vannielii ATCC 17100 |
| 334 | 2696940 | 2697125 | - | NC_007908.1 | Rhodoferax ferrireducens T118 |
| 335 | 1294367 | 1294555 | - | NZ_CP007810.1 | Xanthomonas oryzae pv. oryzicola |
| 336 | 1968494 | 1968688 | - | NZ_CP011257.1 | Ralstonia mannitolilytica |
| 337 | 9174602 | 9174796 | + | NZ_CP012109.1 | Myxococcus hansupus |
| 338 | 1094361 | 1094555 | - | NC_008825.1 | Methylibium petroleiphilum PM1 |
| 339 | 2120894 | 2121088 | + | NZ_CP012943.1 | Ralstonia solanacearum |
| 340 | 4693999 | 4694196 | - | NC_015138.1 | Acidovorax avenae subsp. avenae ATCC 19860 |
| 341 | 3487155 | 3487331 | + | NZ_CP053923.1 | Defluviicoccus vanus |
| 342 | 1115700 | 1115903 | - | NZ_CP035901.1 | Burkholderia glumae |
| 343 | 4683498 | 4683695 | - | NC_008752.1 | Acidovorax citrulli AAC00-1 |
| 344 | 76557 | 76757 | - | NZ_CP022111.1 | Nitrospirillum amazonense CBAmc |
| 345 | 1446396 | 1446614 | + | NZ_CP027666.1 | Ottowia oryzae |
| 346 | 10141695 | 10141871 | + | NZ_CP012159.1 | Chondromyces crocatus |
| 347 | 3122725 | 3122919 | + | NZ_CP046603.1 | Lysobacter soli |
| 348 | 3770125 | 3770334 | + | NZ_CP024201.1 | Caulobacter mirabilis |
| 349 | 230428 | 230625 | - | NZ_CP017754.1 | Cupriavidus malaysiensis |
| 350 | 3757990 | 3758166 | + | NZ_CP060731.1 | Pseudoxanthomonas mexicana |
| 351 | 528492 | 528674 | - | NC_010627.1 | Paraburkholderia phymatum STM815 |
| 352 | 887784 | 887960 | + | NZ_CP042218.1 | Luteimonas granuli |
| 353 | 3402890 | 3403093 | + | NZ_CP037883.1 | Stenotrophomonas indicatrix |
| 354 | 1468555 | 1468770 | - | NZ_CP018845.1 | Herbaspirillum robiniae |
| 355 | 1252607 | 1252789 | - | NZ_CP022163.1 | Melittangium boletus DSM 14713 |
| 356 | 488618 | 488782 | + | NZ_CP022745.1 | Sphingobium xenophagum |
| 357 | 8403959 | 8404162 | - | NZ_CP022203.1 | Corallococcus macrosporus DSM 14697 |
| 358 | 2148915 | 2149088 | - | NZ_CP020538.1 | Sphingobium herbicidovorans |
| 359 | 1474297 | 1474467 | + | NC_011666.1 | Methylocella silvestris BL2 |
| 360 | 2621108 | 2621311 | - | NC_004757.1 | Nitrosomonas europaea ATCC 19718 |
| 361 | 941190 | 941381 | - | NZ_AP018560.1 | Aerosticca soli |
| 362 | 940853 | 941032 | + | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 363 | 1785422 | 1785607 | - | NZ_CP023465.1 | Lysobacter capsici |
| 364 | 633877 | 634083 | + | NZ_CP017480.1 | Luteibacter rhizovicinus DSM 16549 |
| 365 | 770587 | 770772 | - | NC_014006.1 | Sphingobium japonicum UT26S |
| 366 | 1322600 | 1322779 | + | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 367 | 70766 | 70969 | + | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 368 | 3253925 | 3254128 | - | NZ_CP070511.1 | Parageobacillus toebii |
| 369 | 2342454 | 2342627 | + | NZ_CP014841.1 | Dyella thiooxydans |
| 370 | 3378192 | 3378371 | - | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 371 | 2662515 | 2662694 | - | NZ_CP014342.1 | Geobacillus subterraneus |
| 372 | 636793 | 636972 | + | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 373 | 3302952 | 3303131 | + | NZ_CP061470.1 | Geobacillus zalihae |
| 374 | 1650278 | 1650457 | - | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 375 | 1943481 | 1943666 | + | NZ_AP017655.1 | Sphingobium cloacae |
| 376 | 3299255 | 3299440 | - | NZ_CP060035.1 | Sphingobium fuliginis |
| 377 | 495067 | 495258 | - | NZ_CP023705.1 | Sphingomonas melonis |
| 378 | 3404775 | 3404957 | - | NZ_CP035765.1 | Sphingomonas paucimobilis |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LR134340.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF02554.16 | 0.99 | 294 | 53.5 | same-strand | Carbon starvation protein CstA |
| 2 | PF13722.8 | 0.99 | 294 | 53 | same-strand | 5TM C-terminal transporter carbon starvation CstA |
++ More..