Result : P0ACH1
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Sugar fermentation stimulation protein B (Ner-like protein) |
| NCBI Accession ID | X68873.1 |
| Organism | Escherichia coli (strain K12) |
| Left | 627 |
| Right | 905 |
| Strand | + |
| Nucleotide Sequence | ATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGGAGAGATGATTATTGCGAAAGCCCTGGGAACTGACCCCTGGGTTATCTGGCCATCACGCTACCATGATCCGCAGACCCATGAGTTTATCGACAGAACGCAGTTGATGCGTAGCTACACTAAACCGAAAAAATGA |
| Sequence | MESNFIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTDPWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK |
| Source of smORF | Swiss-Prot |
| Function | This protein is involved in positive regulation of the metabolism of sugars. {ECO:0000250}. |
| Pubmed ID | 2670911 9278503 16738553 |
| Domain | CDD:419869 |
| Functional Category | DNA-binding |
| Uniprot ID | P0ACH1 |
| ORF Length (Amino Acid) | 92 |
++ More..
| Conservation Analysis |
No. of Species: 148
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3327089 | 3327367 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 2 | 3334909 | 3335187 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 3 | 481674 | 481952 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 4 | 3318468 | 3318746 | + | NZ_AP014857.1 | Escherichia albertii |
| 5 | 4077390 | 4077668 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 6 | 3840062 | 3840340 | + | NZ_LR134340.1 | Escherichia marmotae |
| 7 | 3474557 | 3474844 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 8 | 1329497 | 1329769 | + | NZ_CP053416.1 | Salmonella bongori |
| 9 | 2259591 | 2259872 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 10 | 2940678 | 2940962 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 11 | 4238230 | 4238502 | + | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 12 | 5357912 | 5358199 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 13 | 2140518 | 2140802 | + | NZ_CP033744.1 | Citrobacter freundii |
| 14 | 1767334 | 1767621 | - | NZ_LT556085.1 | Citrobacter amalonaticus |
| 15 | 3938708 | 3938992 | - | NZ_CP038469.1 | Citrobacter tructae |
| 16 | 4885265 | 4885552 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 17 | 615656 | 615928 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 18 | 3654787 | 3655062 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 19 | 4481285 | 4481533 | + | NZ_CP045300.1 | Kosakonia arachidis |
| 20 | 654283 | 654555 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 21 | 522075 | 522347 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 22 | 1088799 | 1089071 | - | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 23 | 4775053 | 4775328 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 24 | 3732655 | 3732930 | - | NZ_CP015113.1 | Kosakonia radicincitans |
| 25 | 548937 | 549212 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 26 | 1431435 | 1431683 | + | NZ_CP014007.2 | Kosakonia oryzae |
| 27 | 513731 | 514003 | - | NZ_CP041247.1 | Raoultella electrica |
| 28 | 4639742 | 4639987 | - | NZ_CP041247.1 | Raoultella electrica |
| 29 | 4076580 | 4076849 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 30 | 586211 | 586465 | - | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 31 | 1362159 | 1362416 | - | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 32 | 4179487 | 4179759 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 33 | 5251577 | 5251849 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 34 | 2874439 | 2874726 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 35 | 1906982 | 1907269 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 36 | 525920 | 526192 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 37 | 539639 | 539911 | - | NZ_CP054254.1 | Klebsiella variicola |
| 38 | 2597569 | 2597844 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 39 | 1702798 | 1703052 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 40 | 1159142 | 1159369 | + | NZ_CP026047.1 | Raoultella planticola |
| 41 | 2355882 | 2356127 | + | NZ_CP026047.1 | Raoultella planticola |
| 42 | 564043 | 564270 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 43 | 4912350 | 4912592 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 44 | 4753817 | 4754089 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 45 | 3700685 | 3700948 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 46 | 559542 | 559814 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 47 | 532325 | 532597 | - | NZ_CP050508.1 | Raoultella terrigena |
| 48 | 2976247 | 2976510 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 49 | 2840123 | 2840374 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 50 | 4168901 | 4169188 | + | NC_015968.1 | Enterobacter soli |
| 51 | 4347636 | 4347911 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 52 | 4277873 | 4278160 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 53 | 4082938 | 4083225 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 54 | 465926 | 466189 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 55 | 3575966 | 3576229 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 56 | 462851 | 463114 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 57 | 499639 | 499863 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 58 | 4000189 | 4000434 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 59 | 969649 | 969963 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 60 | 508123 | 508398 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 61 | 3336913 | 3337167 | + | NZ_CP035129.1 | Kosakonia cowanii |
| 62 | 4158023 | 4158310 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 63 | 4171908 | 4172195 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 64 | 4230139 | 4230426 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 65 | 568607 | 568891 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 66 | 450749 | 451012 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 67 | 3133163 | 3133450 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 68 | 4511922 | 4512209 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 69 | 333552 | 333815 | - | NZ_CP023525.1 | Cedecea neteri |
| 70 | 439324 | 439599 | - | NZ_CP023525.1 | Cedecea neteri |
| 71 | 1138544 | 1138810 | + | NZ_CP042941.1 | Atlantibacter hermannii |
| 72 | 400155 | 400427 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 73 | 334197 | 334466 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 74 | 500351 | 500614 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 75 | 1056753 | 1057040 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 76 | 612180 | 612443 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 77 | 336783 | 337046 | - | NZ_LR134201.1 | Cedecea lapagei |
| 78 | 668171 | 668452 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 79 | 896543 | 896830 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 80 | 463561 | 463827 | + | NZ_CP031560.1 | Dickeya dianthicola |
| 81 | 125154 | 125411 | + | NZ_CP031560.1 | Dickeya dianthicola |
| 82 | 2828845 | 2829126 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 83 | 3060737 | 3061024 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 84 | 2309800 | 2310057 | + | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 85 | 645824 | 646105 | - | NZ_CP025799.1 | Dickeya zeae |
| 86 | 917263 | 917547 | - | NZ_CP025799.1 | Dickeya zeae |
| 87 | 1680689 | 1680958 | + | NZ_CP025799.1 | Dickeya zeae |
| 88 | 784713 | 784967 | - | NZ_CP025799.1 | Dickeya zeae |
| 89 | 4459195 | 4459452 | - | NZ_CP025799.1 | Dickeya zeae |
| 90 | 3708817 | 3709098 | + | NZ_CP042220.2 | Dickeya poaceiphila |
| 91 | 3509582 | 3509869 | + | NZ_CP042220.2 | Dickeya poaceiphila |
| 92 | 2707548 | 2707778 | + | NZ_CP042220.2 | Dickeya poaceiphila |
| 93 | 3933552 | 3933818 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 94 | 659028 | 659309 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 95 | 972559 | 972846 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 96 | 3139904 | 3140191 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 97 | 462414 | 462680 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 98 | 4698340 | 4698597 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 99 | 2124236 | 2124517 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 100 | 1848400 | 1848687 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 101 | 1727545 | 1727793 | - | NZ_CP009460.1 | Dickeya fangzhongdai |
| 102 | 407721 | 407981 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 103 | 3547635 | 3547898 | + | NZ_CP014137.1 | Brenneria goodwinii |
| 104 | 3301260 | 3301505 | + | NZ_CP014137.1 | Brenneria goodwinii |
| 105 | 4461430 | 4461675 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 106 | 3756618 | 3756890 | + | NC_012880.1 | Musicola paradisiaca Ech703 |
| 107 | 3936526 | 3936789 | + | NC_012880.1 | Musicola paradisiaca Ech703 |
| 108 | 4117376 | 4117642 | + | NC_012880.1 | Musicola paradisiaca Ech703 |
| 109 | 4400733 | 4401008 | - | NZ_LT615367.1 | Dickeya aquatica |
| 110 | 680402 | 680671 | - | NZ_LT615367.1 | Dickeya aquatica |
| 111 | 3955434 | 3955715 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 112 | 3731930 | 3732217 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 113 | 478529 | 478816 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 114 | 4195132 | 4195398 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 115 | 516830 | 517123 | - | NZ_LN907827.1 | Erwinia gerundensis |
| 116 | 206814 | 207104 | - | NZ_CP015581.1 | Tatumella citrea |
| 117 | 4031329 | 4031592 | + | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 118 | 4878401 | 4878661 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 119 | 3220131 | 3220394 | + | NZ_CP065534.1 | Lonsdalea populi |
| 120 | 3426368 | 3426634 | + | NZ_CP065534.1 | Lonsdalea populi |
| 121 | 1676941 | 1677204 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 122 | 1838771 | 1839016 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 123 | 4068962 | 4069243 | + | NC_017554.1 | Pantoea ananatis PA13 |
| 124 | 398188 | 398448 | - | NZ_LR134494.1 | Serratia quinivorans |
| 125 | 947957 | 948220 | + | NZ_CP047495.1 | Pectobacterium brasiliense |
| 126 | 4241803 | 4242066 | + | NZ_CP065044.1 | Pectobacterium aroidearum |
| 127 | 600443 | 600697 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 128 | 3203223 | 3203477 | + | NZ_CP065044.1 | Pectobacterium aroidearum |
| 129 | 4303656 | 4303883 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 130 | 601070 | 601342 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 131 | 1942327 | 1942587 | - | NZ_CP065640.1 | Serratia rubidaea |
| 132 | 4628084 | 4628344 | + | NZ_CP071320.1 | Serratia ureilytica |
| 133 | 4512804 | 4513067 | - | NZ_CP017482.1 | Pectobacterium polaris |
| 134 | 1705962 | 1706216 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 135 | 482615 | 482878 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 136 | 651366 | 651611 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 137 | 3470054 | 3470299 | + | NZ_CP034035.1 | Brenneria rubrifaciens |
| 138 | 4336042 | 4336317 | - | NZ_CP028271.1 | Mixta intestinalis |
| 139 | 386695 | 386955 | - | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 140 | 3339005 | 3339286 | - | NZ_CP049115.1 | Pantoea stewartii |
| 141 | 674782 | 675045 | - | NZ_CP034938.1 | Pectobacterium odoriferum |
| 142 | 735970 | 736233 | - | NZ_CP038498.1 | Pectobacterium punjabense |
| 143 | 640719 | 640982 | - | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 144 | 3310010 | 3310273 | + | NZ_CP015749.1 | Pectobacterium parmentieri |
| 145 | 2520848 | 2521111 | - | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 146 | 4689359 | 4689613 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 147 | 1091193 | 1091459 | + | NZ_CP019706.1 | Pantoea alhagi |
| 148 | 3979676 | 3979939 | + | NZ_CP006569.1 | Sodalis praecaptivus |
| 149 | 4480824 | 4481075 | + | NZ_CP067057.1 | Rahnella aceris |
| 150 | 4149173 | 4149442 | - | NZ_CP067057.1 | Rahnella aceris |
| 151 | 2132266 | 2132535 | - | NZ_CP067057.1 | Rahnella aceris |
| 152 | 458614 | 458874 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 153 | 500181 | 500447 | - | NZ_CP061511.1 | Mixta calida |
| 154 | 386523 | 386783 | - | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 155 | 474597 | 474890 | + | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 156 | 574928 | 575203 | - | NZ_CP026377.1 | Mixta gaviniae |
| 157 | 397451 | 397711 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 158 | 3584732 | 3584992 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 159 | 2034609 | 2034869 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 160 | 2627049 | 2627294 | - | NZ_CP014136.1 | Gibbsiella quercinecans |
| 161 | 3846665 | 3846910 | - | NZ_CP014136.1 | Gibbsiella quercinecans |
| 162 | 247080 | 247340 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 163 | 540002 | 540268 | - | NZ_LT906479.1 | Serratia ficaria |
| 164 | 419118 | 419402 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 165 | 2165011 | 2165244 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 166 | 3660706 | 3660990 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 167 | 1844538 | 1844804 | - | NZ_CP026364.1 | Proteus hauseri |
| 168 | 1336308 | 1336622 | - | NZ_CP023536.1 | Providencia alcalifaciens |
| 169 | 269483 | 269749 | - | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 170 | 550097 | 550408 | - | NZ_CP050150.1 | Hafnia alvei |
| 171 | 3729354 | 3729620 | - | NC_010554.1 | Proteus mirabilis HI4320 |
| 172 | 1034308 | 1034580 | - | NC_010554.1 | Proteus mirabilis HI4320 |
| 173 | 2362049 | 2362309 | - | NZ_CP011254.1 | Serratia fonticola |
| 174 | 5306518 | 5306784 | + | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 175 | 1266684 | 1266932 | + | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 176 | 5225791 | 5226078 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 177 | 1085908 | 1086174 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 178 | 4086061 | 4086330 | + | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 179 | 2185431 | 2185706 | - | NZ_CP007230.1 | Yersinia similis |
| 180 | 4028955 | 4029230 | + | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 181 | 448609 | 448842 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 182 | 4174614 | 4174889 | + | NZ_CP046293.1 | Yersinia intermedia |
| 183 | 2380775 | 2381041 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 184 | 657337 | 657603 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 185 | 2811195 | 2811464 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 186 | 791018 | 791293 | + | NZ_CP011104.1 | Photorhabdus thracensis |
| 187 | 359414 | 359671 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 188 | 3958303 | 3958581 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 189 | 1498946 | 1499224 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 190 | 3297937 | 3298215 | + | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 191 | 4709690 | 4709956 | + | NC_012962.1 | Photorhabdus asymbiotica |
| 192 | 3198494 | 3198769 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 193 | 1119473 | 1119745 | - | NZ_CP029736.1 | Providencia rettgeri |
| 194 | 3420788 | 3421060 | + | NZ_CP031123.2 | Providencia huaxiensis |
| 195 | 1760497 | 1760736 | + | NZ_CP031123.2 | Providencia huaxiensis |
| 196 | 489206 | 489481 | - | NZ_CP032487.1 | Yersinia hibernica |
| 197 | 434531 | 434788 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 198 | 1694479 | 1694742 | + | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 199 | 1033702 | 1033965 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 200 | 1058324 | 1058602 | + | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 201 | 1395477 | 1395755 | + | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 202 | 3651369 | 3651653 | + | NZ_CP038853.1 | Pantoea vagans |
| 203 | 3346297 | 3346554 | + | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 204 | 1937728 | 1937991 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 205 | 2829461 | 2829739 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 206 | 2545618 | 2545896 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 207 | 2778821 | 2779048 | + | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 208 | 3002666 | 3002923 | + | NZ_CP016176.1 | Xenorhabdus hominickii |
| 209 | 2759036 | 2759305 | + | NZ_CP016176.1 | Xenorhabdus hominickii |
| 210 | 2729307 | 2729588 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 211 | 4400478 | 4400738 | + | NZ_CP016176.1 | Xenorhabdus hominickii |
| 212 | 4112422 | 4112679 | + | NZ_CP016176.1 | Xenorhabdus hominickii |
| 213 | 2639604 | 2639834 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 214 | 3016905 | 3017174 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 215 | 2802597 | 2802863 | - | NZ_CP060401.1 | Xenorhabdus nematophila |
| 216 | 345101 | 345367 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 217 | 315492 | 315773 | - | NZ_CP060401.1 | Xenorhabdus nematophila |
| 218 | 2764483 | 2764749 | - | NZ_CP060401.1 | Xenorhabdus nematophila |
| 219 | 140741 | 141019 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 220 | 4035186 | 4035440 | + | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 221 | 681483 | 681755 | + | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 222 | 3343318 | 3343599 | - | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 223 | 655161 | 655442 | - | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 224 | 1036102 | 1036365 | + | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 225 | 4492186 | 4492443 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 226 | 1786606 | 1786881 | - | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 227 | 1687282 | 1687554 | - | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 228 | 1189953 | 1190198 | - | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 229 | 4180329 | 4180559 | - | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 230 | 551914 | 552189 | - | NZ_CP043727.1 | Yersinia canariae |
| 231 | 3936162 | 3936434 | + | NZ_CP048796.1 | Providencia vermicola |
| 232 | 3385185 | 3385460 | - | NZ_CP009787.1 | Yersinia rohdei |
| 233 | 3957182 | 3957454 | + | NZ_LS483422.1 | Providencia heimbachae |
| 234 | 4186910 | 4187185 | + | NZ_CP011118.1 | Yersinia enterocolitica |
| 235 | 1283216 | 1283500 | + | NZ_CP023706.1 | Edwardsiella tarda |
| 236 | 3311762 | 3312046 | + | NZ_CP016043.1 | Edwardsiella hoshinae |
| 237 | 782506 | 782745 | - | NZ_LR134531.1 | Pragia fontium |
| 238 | 499956 | 500213 | - | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 239 | 2144920 | 2145198 | + | NZ_CP009056.1 | Frischella perrara |
| 240 | 113441 | 113695 | + | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
| 241 | 334411 | 334662 | - | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
| 242 | 14779 | 15030 | - | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_004337.2
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01016.21 | 0.97 | 143 | 1870.5 | opposite-strand | Ribosomal L27 protein |
| 2 | PF00829.23 | 0.89 | 131 | 1583.5 | opposite-strand | Ribosomal prokaryotic L21 protein |
| 3 | PF00348.19 | 0.97 | 144 | 311 | same-strand | Polyprenyl synthetase |
++ More..