ProsmORF-pred
Result : P0AC08
Protein Information
Information Type Description
Protein name Flagellar biosynthetic protein FliQ
NCBI Accession ID AE014075.1
Organism Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Left 2174384
Right 2174653
Strand +
Nucleotide Sequence ATGACACCTGAATCGGTCATGATGATGGGAACTGAAGCGATGAAAGTCGCGCTGGCACTGGCAGCCCCGCTGTTGCTGGTGGCGCTGGTCACGGGCCTTATCATCAGTATTTTGCAGGCAGCCACGCAGATTAACGAAATGACGCTGTCGTTTATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAG
Sequence MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQINEMTLSFIPKIIAVFIAIIIAGPWMLNLLLDYVRTLFTNLPYIIG
Source of smORF Swiss-Prot
Function Required for the assembly of the rivet at the earliest stage of flagellar biosynthesis. {ECO:0000250}.
Pubmed ID 12471157
Domain CDD:412617
Functional Category Others
Uniprot ID P0AC08
ORF Length (Amino Acid) 89
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 413
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 2586129 2586398 + NZ_LR134340.1 Escherichia marmotae
2 2022486 2022755 + NC_004337.2 Shigella flexneri 2a str. 301
3 2022616 2022885 + NC_000913.3 Escherichia coli str. K-12 substr. MG1655
4 2647299 2647568 + NC_002695.2 Escherichia coli O157:H7 str. Sakai
5 1952531 1952800 + NZ_AP014857.1 Escherichia albertii
6 1757824 1758093 - NZ_CP045845.1 Kluyvera intermedia
7 558415 558684 - NZ_CP045769.1 Enterobacter cancerogenus
8 728188 728457 + NZ_AP019007.1 Enterobacter oligotrophicus
9 3019274 3019543 + NZ_CP009756.1 Enterobacter cloacae
10 3077089 3077358 - NZ_CP009756.1 Enterobacter cloacae
11 2903934 2904203 + NZ_AP022508.1 Enterobacter bugandensis
12 2917527 2917796 + NZ_CP027986.1 Enterobacter sichuanensis
13 2976566 2976835 - NZ_CP027986.1 Enterobacter sichuanensis
14 2919842 2920111 + NZ_CP017184.1 Enterobacter roggenkampii
15 4341111 4341380 - NZ_CP025034.2 Enterobacter sp. SGAir0187
16 2164744 2165013 + NZ_CP017279.1 Enterobacter ludwigii
17 2224441 2224710 - NZ_CP017279.1 Enterobacter ludwigii
18 3217227 3217496 + NZ_CP043318.1 Enterobacter chengduensis
19 2921170 2921439 + NC_015968.1 Enterobacter soli
20 1698736 1699005 + NZ_CP023529.1 Lelliottia amnigena
21 1741506 1741775 - NZ_CP013990.1 Leclercia adecarboxylata
22 75268 75537 + NZ_CP053416.1 Salmonella bongori
23 2066070 2066339 + NC_003197.2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
24 1620755 1621024 - NZ_CP054058.1 Scandinavium goeteborgense
25 5083613 5083882 - NZ_CP045300.1 Kosakonia arachidis
26 2093103 2093372 - NZ_CP045300.1 Kosakonia arachidis
27 2085672 2085941 - NZ_CP014007.2 Kosakonia oryzae
28 1259620 1259886 + NZ_CP014007.2 Kosakonia oryzae
29 3118903 3119172 + NZ_CP015113.1 Kosakonia radicincitans
30 3921355 3921621 - NZ_CP015113.1 Kosakonia radicincitans
31 1523981 1524250 + NZ_CP038469.1 Citrobacter tructae
32 4361915 4362184 - NZ_CP044098.1 Citrobacter portucalensis
33 738018 738287 + NZ_CP033744.1 Citrobacter freundii
34 133080 133349 + NZ_CP042941.1 Atlantibacter hermannii
35 4279543 4279812 + NZ_LT556085.1 Citrobacter amalonaticus
36 1843259 1843528 - NZ_CP035129.1 Kosakonia cowanii
37 3888696 3888965 + NZ_CP026364.1 Proteus hauseri
38 2654142 2654411 - NZ_CP045205.1 Citrobacter telavivensis
39 2134202 2134471 + NC_013716.1 Citrobacter rodentium ICC168
40 986994 987263 - NC_009792.1 Citrobacter koseri ATCC BAA-895
41 1753280 1753549 + NC_010554.1 Proteus mirabilis HI4320
42 80354 80623 - NZ_CP016337.1 Kosakonia sacchari
43 2988495 2988764 + NZ_CP063425.1 Kosakonia pseudosacchari
44 3692809 3693078 - NZ_CP063425.1 Kosakonia pseudosacchari
45 2330206 2330475 + NZ_CP047349.1 Proteus terrae subsp. cibarius
46 2669983 2670252 + NZ_CP012264.1 Cronobacter condimenti 1330
47 2448661 2448930 - NZ_CP051548.1 Phytobacter diazotrophicus
48 1169503 1169772 - NZ_CP011602.1 Phytobacter ursingii
49 973556 973825 + NZ_CP057657.1 Escherichia fergusonii
50 748798 749067 - NZ_CP027107.1 Cronobacter sakazakii
51 1464912 1465181 - NZ_CP013940.1 Cronobacter malonaticus LMG 23826
52 2697237 2697506 + NZ_CP012257.1 Cronobacter universalis NCTC 9529
53 2792308 2792577 + NZ_CP012266.1 Cronobacter dublinensis subsp. dublinensis LMG 23823
54 1262978 1263247 - NZ_CP012268.1 Cronobacter muytjensii ATCC 51329
55 155967 156236 - NZ_CP006569.1 Sodalis praecaptivus
56 709777 710046 - NZ_CP006569.1 Sodalis praecaptivus
57 1741180 1741449 - NZ_AP023184.1 Buttiauxella agrestis
58 4656151 4656420 - NZ_CP009460.1 Dickeya fangzhongdai
59 3061744 3062013 + NC_014500.1 Dickeya dadantii 3937
60 306602 306871 + NZ_CP015137.1 Dickeya solani IPO 2222
61 1782973 1783242 - NC_012912.1 Dickeya chrysanthemi Ech1591
62 2995190 2995459 + NZ_CP031560.1 Dickeya dianthicola
63 1760149 1760418 - NZ_CP023525.1 Cedecea neteri
64 3226359 3226628 + NZ_CP048784.1 Serratia liquefaciens
65 2014079 2014348 + NZ_AP021881.1 Sulfuriferula nivalis
66 1046807 1047076 - NZ_CP040428.1 Jejubacter calystegiae
67 1594095 1594364 - NZ_CP042220.2 Dickeya poaceiphila
68 1679974 1680243 - NZ_LR134201.1 Cedecea lapagei
69 5494611 5494880 + NZ_CP010897.2 Pandoraea vervacti
70 5608462 5608731 + NZ_LT906435.1 Pandoraea sputorum
71 2642950 2643219 + NZ_CP023009.1 Lonsdalea britannica
72 5304808 5305077 + NZ_CP048832.1 Janthinobacterium lividum
73 1853008 1853277 - NZ_CP064781.1 Azospira restricta
74 5476727 5476996 + NZ_CP011253.3 Pandoraea oxalativorans
75 5100762 5101031 + NZ_CP011807.3 Pandoraea faecigallinarum
76 2898501 2898770 + NZ_CP041185.1 Janthinobacterium tructae
77 1987817 1988086 + NZ_FO704551.1 Xenorhabdus poinarii G6
78 2968759 2969028 + NZ_CP025799.1 Dickeya zeae
79 1491861 1492130 + NZ_CP065534.1 Lonsdalea populi
80 1213070 1213339 - NZ_AP021884.1 Sulfuriferula plumbiphila
81 3307803 3308072 + NZ_LR134475.1 Klebsiella aerogenes
82 467784 468053 - NZ_CP054043.1 Yersinia mollaretii ATCC 43969
83 3104280 3104549 - NZ_CP054043.1 Yersinia mollaretii ATCC 43969
84 5241048 5241317 + NZ_CP023422.1 Janthinobacterium svalbardensis
85 2922846 2923115 + NZ_LT615367.1 Dickeya aquatica
86 3257466 3257735 + NZ_LR134494.1 Serratia quinivorans
87 985216 985485 - NZ_CP067057.1 Rahnella aceris
88 498077 498346 - NZ_CP016176.1 Xenorhabdus hominickii
89 3238926 3239195 + NC_015567.1 Serratia plymuthica AS9
90 1986178 1986447 - NZ_CP071320.1 Serratia ureilytica
91 2410688 2410957 + NZ_CP016948.1 Serratia surfactantfaciens
92 3112268 3112537 + NZ_CP038662.1 Serratia nematodiphila
93 3142107 3142376 + NZ_LT906479.1 Serratia ficaria
94 1361809 1362078 - NZ_HG322949.1 Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628
95 2405557 2405826 + NZ_CP034148.1 Pantoea agglomerans
96 1673518 1673787 - NZ_CP045720.1 Pantoea eucalypti
97 302391 302660 + NZ_CP012371.1 Nitrosospira briensis C-128
98 5213925 5214194 + NZ_CP028324.1 Massilia armeniaca
99 3263931 3264200 - NZ_CP024608.1 Massilia violaceinigra
100 4158245 4158514 + NZ_CP007044.2 Chania multitudinisentens RB-25
101 2618198 2618467 + NZ_CP019038.1 Massilia putida
102 2286970 2287239 + NZ_CP046904.1 Massilia flava
103 1642884 1643153 - NZ_CP038853.1 Pantoea vagans
104 1832181 1832450 + NC_012880.1 Musicola paradisiaca Ech703
105 2788496 2788765 + NZ_CP012871.1 [Enterobacter] lignolyticus
106 2690533 2690802 + NC_013892.1 Xenorhabdus bovienii SS-2004
107 2460255 2460524 + NZ_FO704550.1 Xenorhabdus doucetiae
108 2529401 2529670 + NZ_LR134373.1 Yersinia pseudotuberculosis
109 3711703 3711972 - NZ_CP007230.1 Yersinia similis
110 4477665 4477934 + NZ_CP065640.1 Serratia rubidaea
111 256781 257050 - NZ_CP009787.1 Yersinia rohdei
112 994311 994580 + NZ_LT671418.1 Herminiimonas arsenitoxidans
113 2221673 2221942 - NZ_CP013737.1 Herbaspirillum rubrisubalbicans M1
114 2735480 2735749 + NZ_CP072455.1 Xenorhabdus budapestensis
115 4183877 4184146 + NZ_CP020388.1 Pluralibacter gergoviae
116 1552711 1552980 + NZ_CP020388.1 Pluralibacter gergoviae
117 798641 798910 + NZ_CP011078.1 Yersinia ruckeri
118 2876406 2876675 + NZ_CP048796.1 Providencia vermicola
119 2120680 2120949 + NZ_CP060401.1 Xenorhabdus nematophila
120 3233613 3233882 - NZ_CP019706.1 Pantoea alhagi
121 1527970 1528239 - NZ_CP019706.1 Pantoea alhagi
122 108877 109146 - NZ_CP009781.1 Yersinia aldovae 670-83
123 1864815 1865084 - NZ_CP046293.1 Yersinia intermedia
124 2741447 2741716 + NZ_CP050150.1 Hafnia alvei
125 3415903 3416172 + NZ_CP040017.1 Massilia umbonata
126 1971619 1971888 + NZ_AP018738.1 Ferriphaselus amnicola
127 2196573 2196842 + NZ_CP021106.3 Nitrosospira lacus
128 2304907 2305176 - NC_005126.1 Photorhabdus laumondii subsp. laumondii TTO1
129 5385009 5385278 + NZ_CP011254.1 Serratia fonticola
130 1371084 1371353 + NZ_CP018845.1 Herbaspirillum robiniae
131 2816988 2817257 + NZ_CP011118.1 Yersinia enterocolitica
132 2265732 2266001 + NZ_CP032487.1 Yersinia hibernica
133 1621848 1622117 - NZ_CP023567.1 Erwinia pyrifoliae
134 2909795 2910064 - NZ_CP023567.1 Erwinia pyrifoliae
135 2260659 2260928 + NC_010694.1 Erwinia tasmaniensis Et1/99
136 3518799 3519068 + NZ_CP023536.1 Providencia alcalifaciens
137 2364564 2364833 - NZ_CP037993.1 Herbaspirillum huttiense
138 2811397 2811666 + NZ_LS483422.1 Providencia heimbachae
139 1024626 1024895 - NZ_CP029331.1 Thauera hydrothermalis
140 2784503 2784772 + NZ_CP043727.1 Yersinia canariae
141 2997697 2997966 + NC_014306.1 Erwinia billingiae Eb661
142 1255828 1256097 + NC_022357.1 Sulfuricella denitrificans skB26
143 2943658 2943927 + NZ_CP038498.1 Pectobacterium punjabense
144 2115450 2115719 + NZ_CP015749.1 Pectobacterium parmentieri
145 4865893 4866162 + NZ_CP015750.1 Pectobacterium wasabiae CFBP 3304
146 799644 799913 + NC_012969.1 Methylovorus glucosetrophus SIP3-4
147 1569973 1570242 - NC_013961.1 Erwinia amylovora CFBP1430
148 2766203 2766472 - NC_013961.1 Erwinia amylovora CFBP1430
149 2361268 2361537 + NZ_LN907827.1 Erwinia gerundensis
150 3146482 3146751 + NZ_CP009125.1 Pectobacterium atrosepticum
151 1893006 1893275 + NZ_CP017482.1 Pectobacterium polaris
152 2637982 2638251 + NZ_CP061511.1 Mixta calida
153 74936 75205 + NZ_CP061511.1 Mixta calida
154 3069154 3069423 + NZ_CP065044.1 Pectobacterium aroidearum
155 2769142 2769411 + NZ_CP026377.1 Mixta gaviniae
156 126064 126333 + NZ_CP026377.1 Mixta gaviniae
157 243600 243869 - NZ_CP014646.1 Thauera humireducens
158 3092101 3092370 + NZ_CP016210.1 Azoarcus olearius
159 3004018 3004287 + NC_012962.1 Photorhabdus asymbiotica
160 1062487 1062756 - NZ_CP036401.1 Massilia albidiflava
161 4872806 4873075 + NZ_CP011104.1 Photorhabdus thracensis
162 599478 599747 - NC_013959.1 Sideroxydans lithotrophicus ES-1
163 3492463 3492732 - NZ_CP048812.1 Halomonas socia
164 950920 951189 - NZ_CP013235.1 Collimonas arenae
165 2730303 2730572 + NZ_CP065435.1 Halomonas sp. SS10-MC5
166 3817126 3817395 + NC_018691.1 Alcanivorax dieselolei B5
167 3899340 3899609 + NZ_CP014226.1 Halomonas chromatireducens
168 1022544 1022813 + NC_012968.1 Methylotenera mobilis JLW8
169 3929287 3929556 + NZ_CP021435.1 Halomonas beimenensis
170 2774697 2774966 - NZ_CP066075.1 Paraburkholderia ginsengisoli
171 84702 84974 + NC_004545.1 Buchnera aphidicola str. Bp (Baizongia pistaciae)
172 104810 105079 - NZ_AP022843.1 Halomonas hydrothermalis
173 104242 104511 - NZ_CP065135.1 Halomonas venusta
174 822151 822420 + NZ_CP059082.1 Halomonas titanicae
175 2399624 2399893 + NZ_CP025682.1 Azoarcus pumilus
176 945866 946135 - NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H
177 1332106 1332375 - NZ_CP013232.1 Collimonas fungivorans
178 4268354 4268623 - NZ_CP059560.1 Aromatoleum petrolei
179 3584548 3584817 - NZ_CP021358.1 Kushneria marisflavi
180 2659405 2659674 - NZ_AP017928.1 Methylocaldum marinum
181 1901899 1902168 - NC_017554.1 Pantoea ananatis PA13
182 111290 111559 - NZ_CP048602.1 Halomonas piezotolerans
183 3306716 3306985 + NZ_CP021323.1 Kushneria konosiri
184 890936 891205 + NZ_CP049115.1 Pantoea stewartii
185 2221943 2222212 + NC_007963.1 Chromohalobacter salexigens DSM 3043
186 567526 567798 + NZ_AP018721.1 Sulfuritortus calidifontis
187 2876662 2876931 + NZ_CP034036.1 Brenneria nigrifluens DSM 30175 = ATCC 13028
188 2227793 2228062 + NZ_CP014137.1 Brenneria goodwinii
189 2224689 2224958 - NC_010170.1 Bordetella petrii
190 2104498 2104767 - NC_007947.1 Methylobacillus flagellatus KT
191 922042 922311 + NZ_CP059467.1 Aromatoleum bremense
192 3773663 3773932 + NZ_CP038034.1 Achromobacter insolitus
193 3297862 3298131 + NC_010622.1 Paraburkholderia phymatum STM815
194 3315202 3315471 + NZ_CP004387.1 Alcanivorax pacificus W11-5
195 2545132 2545401 + NZ_HG916765.1 Castellaniella defragrans 65Phen
196 1455259 1455528 - NZ_CP034035.1 Brenneria rubrifaciens
197 1045159 1045428 - NZ_CP053986.1 Achromobacter denitrificans
198 234644 234913 + NZ_CP016543.2 Planococcus donghaensis
199 216199 216468 + NZ_CP016537.2 Planococcus halocryophilus
200 1774639 1774914 - NZ_AP019755.1 Nitrosomonas stercoris
201 3518783 3519052 + NZ_LR778301.1 Denitratisoma oestradiolicum
202 1135863 1136132 + NC_014207.1 Methylotenera versatilis 301
203 408414 408683 + NZ_CP048711.1 Kineobactrum salinum
204 2335525 2335794 - NZ_CP029736.1 Providencia rettgeri
205 1543983 1544252 - NZ_CP013661.2 Planococcus kocurii
206 226944 227213 + NZ_CP016534.2 Planococcus antarcticus DSM 14505
207 4563064 4563333 + NZ_CP047495.1 Pectobacterium brasiliense
208 1815503 1815772 - NZ_CP051652.1 Pectobacterium carotovorum
209 1938286 1938555 - NZ_CP034938.1 Pectobacterium odoriferum
210 207751 208020 + NZ_CP016540.2 Planococcus versutus
211 221105 221374 + NZ_CP019401.1 Planococcus faecalis
212 3430198 3430467 + NZ_CP026111.1 Paraburkholderia terrae
213 5255726 5255995 + NC_023018.2 Pandoraea pnomenusa
214 131648 131917 - NZ_CP013481.2 Pandoraea apista
215 5459370 5459639 + NZ_CP047385.1 Pandoraea fibrosis
216 5734617 5734886 + NZ_CP010310.2 Pandoraea pulmonicola
217 1144884 1145156 + NZ_CP045571.1 Acidithiobacillus thiooxidans ATCC 19377
218 905274 905543 - NZ_CP031123.2 Providencia huaxiensis
219 5687194 5687463 - NZ_CP018420.1 Pseudomonas veronii
220 4330154 4330423 - NZ_CP034464.1 Undibacterium parvum
221 417644 417913 - NZ_CP051461.1 Polaromonas vacuolata
222 2320647 2320916 + NC_012779.2 Edwardsiella ictaluri 93-146
223 1414494 1414763 - NZ_CP016043.1 Edwardsiella hoshinae
224 6033567 6033836 + NZ_CP013480.3 Pandoraea norimbergensis
225 119459 119728 + NZ_CP006664.1 Edwardsiella anguillarum ET080813
226 502615 502890 - NC_004757.1 Nitrosomonas europaea ATCC 19718
227 2313865 2314134 - NZ_CP011930.1 Herbaspirillum seropedicae
228 779584 779853 + NZ_AP018560.1 Aerosticca soli
229 2176594 2176869 + NC_008344.1 Nitrosomonas eutropha C91
230 2347472 2347741 + NZ_CP015581.1 Tatumella citrea
231 2425241 2425510 - NZ_CP039268.1 Thermochromatium tepidum ATCC 43061
232 3095701 3095970 - NZ_CP023706.1 Edwardsiella tarda
233 415002 415271 - NZ_CP017480.1 Luteibacter rhizovicinus DSM 16549
234 57020 57289 - NC_016893.1 Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)
235 3173450 3173719 + NZ_CP068285.1 Ralstonia syzygii subsp. celebesensis
236 1030592 1030861 + NZ_AP021888.1 Thiosulfativibrio zosterae
237 3417729 3417998 + NZ_CP013659.2 Planococcus rifietoensis
238 3445706 3445975 - NZ_CP013119.1 Alcaligenes faecalis
239 229957 230226 + NZ_CP016539.2 Planococcus plakortidis
240 3444652 3444921 - NZ_CP041046.1 Luteibacter pinisoli
241 1116657 1116926 - NC_014394.1 Gallionella capsiferriformans ES-2
242 3582374 3582643 - NZ_CP035467.1 Methylotuvimicrobium buryatense
243 1867691 1867960 + NZ_CP028271.1 Mixta intestinalis
244 3847797 3848066 + NZ_CP028271.1 Mixta intestinalis
245 227455 227724 + NZ_CP016538.2 Planococcus maritimus
246 228023 228292 + NZ_CP059540.1 Planococcus maritimus
247 3304354 3304623 - NC_013851.1 Allochromatium vinosum DSM 180
248 902404 902673 + NZ_CP035033.1 Hydrogenovibrio thermophilus
249 1073459 1073728 + NZ_AP022853.1 Sulfurimicrobium lacus
250 1755673 1755942 + NZ_AP018933.1 Zymobacter palmae
251 2856469 2856738 + NZ_CP014864.1 Microbulbifer thermotolerans
252 3669865 3670134 - NC_016112.1 Methylotuvimicrobium alcaliphilum 20Z
253 2228422 2228691 - NZ_CP032518.1 Cupriavidus oxalaticus
254 584621 584890 + NZ_CP046415.1 Guyparkeria halophila
255 6106821 6107090 + NZ_CP056030.1 Pseudomonas eucalypticola
256 2730466 2730735 + NZ_CP062804.1 Cupriavidus basilensis
257 2354719 2354988 - NZ_CP017415.1 Acidihalobacter yilgarnenesis
258 807436 807705 - NZ_CP058952.1 Chitinibacter fontanus
259 4539684 4539953 + NZ_CP013106.1 Halomonas huangheensis
260 1611610 1611879 - NZ_CP011412.1 Sedimenticola thiotaurini
261 2916697 2916966 + NZ_CP045504.1 Desulfovibrio sulfodismutans DSM 3696
262 380334 380603 + NC_018012.1 Thiocystis violascens DSM 198
263 2377154 2377423 - NZ_CP009056.1 Frischella perrara
264 1439178 1439453 - NZ_CP007030.1 Thiomicrospira aerophila AL3
265 3194282 3194551 - NZ_CP010311.1 Geoalkalibacter subterraneus
266 1543699 1543968 + NC_007614.1 Nitrosospira multiformis ATCC 25196
267 859882 860106 + NZ_AP018722.1 Thiomicrorhabdus aquaedulcis
268 1387190 1387462 - NC_014758.1 Calditerrivibrio nitroreducens DSM 19672
269 2889082 2889357 - NZ_AP017378.1 Desulfovibrio ferrophilus
270 1365175 1365444 + NZ_CP011367.1 Thioalkalivibrio versutus
271 1980107 1980376 + NZ_CP054624.1 Cupriavidus gilardii
272 1477657 1477926 - NZ_CP007028.1 Thermocrinis ruber
273 10453 10722 + NC_008576.1 Magnetococcus marinus MC-1
274 364534 364764 - NZ_CP028339.1 Thauera aromatica K172
275 1593693 1593962 - NZ_CP040602.1 Thiomicrorhabdus sediminis
276 4516242 4516511 + NZ_CP026538.1 Desulfovibrio carbinolicus
277 115269 115538 - NZ_CP029495.1 Chromobacterium phragmitis
278 1517634 1517909 + NZ_AP012273.1 Thiolapillus brandeum
279 1793716 1793985 - NC_010645.1 Bordetella avium 197N
280 4652084 4652353 + NZ_CP041730.1 Chitinimonas arctica
281 5239277 5239546 + NC_012796.1 Desulfovibrio magneticus RS-1
282 3082887 3083156 + NZ_CP049134.1 Paraburkholderia tropica
283 3709990 3710259 - NZ_CP010820.1 Lysinibacillus fusiformis
284 3796723 3796953 + NZ_CP043046.1 Pigmentiphaga aceris
285 3063364 3063633 + NZ_CP015108.1 Sporosarcina ureae
286 390212 390442 - NZ_CP018839.1 Thauera chlorobenzoica
287 2533791 2534060 - NZ_CP065425.1 Heyndrickxia vini
288 1274972 1275190 - NC_014209.1 Thermoanaerobacter mathranii subsp. mathranii str. A3
289 1251434 1251652 - NC_013921.1 Thermoanaerobacter italicus Ab9
290 2935592 2935861 + NZ_CP029640.1 Paraburkholderia dokdonella
291 1358178 1358447 + NC_007759.1 Syntrophus aciditrophicus SB
292 138211 138480 + NZ_LR134302.1 Achromobacter spanius
293 1519851 1520120 + NC_014098.1 Kyrpidia tusciae DSM 2912
294 1898785 1899054 + NZ_CP043420.1 Kushneria phosphatilytica
295 1445518 1445787 - NC_014410.1 Thermoanaerobacterium thermosaccharolyticum DSM 571
296 1455866 1456135 - NZ_CP047602.1 Thermoanaerobacterium aotearoense
297 633650 633919 - NZ_CP039288.1 Cupriavidus necator H16
298 1734603 1734872 - NZ_CP024955.1 Kyrpidia spormannii
299 2547914 2548183 + NC_014972.1 Desulfobulbus propionicus DSM 2032
300 280310 280555 - NZ_CP029364.1 Bacillus halotolerans
301 1575382 1575654 - NZ_CP040676.1 Exiguobacterium mexicanum
302 2006886 2007155 - NZ_CP013742.1 Legionella pneumophila
303 1378957 1379226 - NC_015555.1 Thermoanaerobacterium xylanolyticum LX-11
304 2164323 2164592 - NZ_CP043473.1 Chromobacterium paludis
305 1405426 1405644 - NC_003869.1 Caldanaerobacter subterraneus subsp. tengcongensis MB4
306 1683879 1684148 + NZ_CP020931.1 Marinobacter salarius
307 1562831 1563097 + NZ_CP021886.1 Helicobacter apodemus
308 865669 865887 + NC_015318.1 Hippea maritima DSM 10411
309 1279126 1279383 - NC_014964.1 Thermoanaerobacter brockii subsp. finnii Ako-1
310 1283712 1283969 - NZ_CP009170.1 Thermoanaerobacter kivui
311 2838854 2839123 + NZ_CP017755.1 Cupriavidus malaysiensis
312 1390326 1390583 - NC_015958.1 Thermoanaerobacter wiegelii Rt8.B1
313 1667483 1667734 + NZ_CP063087.1 Helicobacter winghamensis
314 1613199 1613468 + NZ_CP048852.1 Bacillus tequilensis
315 1678405 1678674 + NZ_CP013984.1 Bacillus inaquosorum
316 1180423 1180692 + NZ_CP016023.1 Ralstonia insidiosa
317 2008658 2008927 - NZ_CP011835.1 Azotobacter chroococcum
318 453872 454123 - NZ_LN907858.1 Helicobacter typhlonius
319 3116657 3116926 - NC_020541.1 Rhodanobacter denitrificans
320 2433530 2433799 - NC_017506.1 Marinobacter adhaerens HP15
321 1764372 1764641 - NZ_CP054020.1 Thiomicrorhabdus xiamenensis
322 1292284 1292553 + NZ_CP011971.1 Steroidobacter denitrificans
323 2024968 2025237 - NZ_CP054140.1 Desulfobulbus oligotrophicus
324 1709706 1709951 + NZ_CP051464.1 Bacillus mojavensis
325 1504235 1504504 + NZ_CP031223.1 Psychrobacillus glaciei
326 1415869 1416138 - NZ_CP017707.1 Chromobacterium vaccinii
327 3544092 3544361 + NZ_CP034235.1 Paenibacillus psychroresistens
328 21958 22227 - NZ_CP045302.1 Azotobacter salinestris
329 2409089 2409358 - NC_012560.1 Azotobacter vinelandii DJ
330 1578984 1579253 + NZ_CP009416.1 Jeotgalibacillus malaysiensis
331 3944901 3945170 + NC_014532.2 Halomonas elongata DSM 2581
332 646405 646674 + NC_019978.1 Halobacteroides halobius DSM 5150
333 3025989 3026258 - NZ_CP017561.1 Paraburkholderia sprentiae WSM5005
334 2256224 2256493 - NZ_CP015958.1 Paraburkholderia caribensis
335 2901823 2902092 - NZ_CP007445.1 Gilliamella apicola
336 3721703 3721972 - NC_013960.1 Nitrosococcus halophilus Nc 4
337 1363161 1363430 + NZ_CP011258.1 Ralstonia mannitolilytica
338 5326159 5326428 - NC_007645.1 Hahella chejuensis KCTC 2396
339 2813984 2814253 + NC_021287.1 Caballeronia insecticola
340 713499 713771 + NZ_CP013341.1 Nitrosomonas ureae
341 1277051 1277269 + NZ_AP018676.1 Helicobacter cinaedi
342 948950 949225 + NC_008578.1 Acidothermus cellulolyticus 11B
343 1588940 1589209 + NZ_CP012944.1 Ralstonia solanacearum
344 2087624 2087890 + NC_007575.1 Sulfurimonas denitrificans DSM 1251
345 1411555 1411824 - NC_014926.1 Thermovibrio ammonificans HB-1
346 926133 926402 + NZ_AP020335.1 Hydrogenovibrio marinus
347 3043078 3043347 + NZ_CP046913.1 Paraburkholderia acidisoli
348 114888 115157 - NZ_CP011568.3 Pandoraea thiooxydans
349 419749 420000 + NC_004917.1 Helicobacter hepaticus ATCC 51449
350 1431352 1431621 + NC_011901.1 Thioalkalivibrio sulfidiphilus HL-EbGr7
351 3412080 3412349 - NC_005085.1 Chromobacterium violaceum ATCC 12472
352 2962614 2962883 - NZ_CP047241.1 Aquitalea denitrificans
353 300635 300904 + NC_019940.1 Thioflavicoccus mobilis 8321
354 105744 106016 - NZ_CP013459.1 Burkholderia stagnalis
355 2140931 2141200 - NZ_CP014841.1 Dyella thiooxydans
356 1678833 1679102 + NZ_CP016268.1 Woeseia oceani
357 50475 50747 - NZ_CP020737.1 Paraburkholderia acidophila
358 3027747 3028016 - NZ_AP019312.1 Chromobacterium haemolyticum
359 904733 905005 - NZ_CP026328.2 Acidithiobacillus caldus
360 1942430 1942699 - NZ_CP016440.1 Bordetella pseudohinzii
361 636628 636897 - NZ_CP022987.1 Pusillimonas thiosulfatoxidans
362 3002533 3002802 + NZ_CP046909.1 Paraburkholderia acidiphila
363 1697283 1697522 + NZ_AP023212.1 Hydrogenimonas urashimensis
364 119612 119875 + NC_020995.1 Enterococcus casseliflavus EC20
365 2606083 2606352 - NZ_CP016171.1 Bordetella bronchialis
366 3688537 3688806 - NZ_CP021395.1 Bordetella hinzii
367 1857023 1857292 - NZ_CP043146.1 Bordetella holmesii
368 1261412 1261645 + NC_012438.1 Sulfurihydrogenibium azorense Az-Fu1
369 2432875 2433144 - NZ_CP016379.1 Anoxybacter fermentans
370 2523063 2523332 - NZ_CP042382.1 Pistricoccus aurantiacus
371 2683852 2684121 + NZ_CP039731.1 Aquitalea aquatilis
372 31526 31798 + NC_007651.1 Burkholderia thailandensis E264
373 1365541 1365810 - NZ_CP022989.1 Paraburkholderia aromaticivorans
374 53266 53538 - NZ_CP013401.1 Burkholderia metallica
375 157647 157922 - NZ_CP020046.1 Thiomonas intermedia
376 82721 82993 - NZ_CP013414.1 Burkholderia ubonensis
377 989798 990067 - NZ_CP045798.1 Thermoanaerosceptrum fracticalcis
378 1362143 1362412 - NC_007498.2 Syntrophotalea carbinolica DSM 2380
379 1025377 1025613 - NC_013757.1 Geodermatophilus obscurus DSM 43160
380 95735 96004 - NC_008229.1 Helicobacter acinonychis str. Sheeba
381 4232219 4232488 + NC_010681.1 Paraburkholderia phytofirmans PsJN
382 1944562 1944831 + NZ_CP031467.1 Paraburkholderia caffeinilytica
383 170336 170608 - NZ_CP009832.1 Burkholderia multivorans ATCC BAA-247
384 3811946 3812215 + NZ_CP024934.1 Paraburkholderia graminis
385 1109870 1110088 + NC_014810.2 Helicobacter felis ATCC 49179
386 3842551 3842820 + NZ_CP024941.1 Paraburkholderia terricola
387 4681447 4681716 + NC_007951.1 Paraburkholderia xenovorans LB400
388 1451178 1451396 - NC_017379.1 Helicobacter pylori Puno135
389 2101553 2101822 + NZ_CP042593.1 Bacillus dafuensis
390 43069 43341 - NZ_CP013450.1 Burkholderia cenocepacia
391 1356846 1357118 - NZ_CP011503.1 Burkholderia pyrrocinia
392 1784305 1784574 - NZ_AP018724.1 Sulfurivermis fontis
393 48026 48298 - NZ_CP045235.1 Burkholderia cepacia
394 19833 20105 - NZ_CP002580.1 Burkholderia plantarii
395 666620 666889 + NZ_LS483446.1 Helicobacter mustelae
396 4221225 4221494 - NZ_CP064030.1 Dyella caseinilytica
397 2676555 2676776 - NC_015275.1 Cellulosilyticum lentocellum DSM 5427
398 3275065 3275337 + NZ_CP009795.1 Burkholderia dolosa AU0158
399 548053 548325 + NZ_CP009727.1 Burkholderia mallei
400 1711097 1711369 - NZ_CP008781.1 Burkholderia pseudomallei
401 423201 423422 + NZ_CP007501.1 Polynucleobacter duraquae
402 136262 136513 - NC_017735.1 Helicobacter cetorum MIT 99-5656
403 1714212 1714484 - NZ_CP009555.1 Burkholderia oklahomensis C6786
404 213249 213488 + NZ_CP010995.1 Campylobacter iguaniorum
405 2270596 2270868 - NZ_CP035900.1 Burkholderia glumae
406 984644 984865 + NC_008346.1 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311
407 60520 60792 - NZ_CP013398.1 Burkholderia seminalis
408 1016245 1016514 + NZ_AP021889.1 Thiosulfatimonas sediminis
409 54568 54840 - NC_007510.1 Burkholderia lata
410 2535157 2535426 - NZ_CP018866.1 Sutcliffiella cohnii
411 1935797 1936063 + NZ_CP012544.1 Campylobacter showae
412 176623 176889 - NZ_CP012543.1 Campylobacter rectus
413 186026 186244 + NZ_CP059443.1 Campylobacter fetus
414 47734 47988 + NC_014762.1 Sulfuricurvum kujiense DSM 16994
415 1687658 1687927 - NZ_CP036150.1 Oceanispirochaeta crateris
416 1727197 1727466 - NC_014378.1 Acetohalobium arabaticum DSM 5501
417 1750128 1750394 - NZ_CP053826.1 Campylobacter curvus
418 1628757 1629029 - NZ_CP032485.1 Neokomagataea tanensis
419 918959 919228 - NZ_AP019378.1 Bordetella parapertussis
420 2357187 2357456 - NZ_LR134326.1 Bordetella bronchiseptica
421 1149450 1149719 - NC_018518.1 Bordetella pertussis 18323
422 2622833 2623102 - NZ_CP014544.1 Zhongshania aliphaticivorans
423 1933948 1934223 + NZ_CP018632.1 Granulosicoccus antarcticus IMCC3135
424 1090700 1090963 + NZ_CP049740.1 Jeotgalibaca arthritidis
425 100694 100960 - NZ_CP041406.1 Sulfurimonas paralvinellae
426 1332423 1332686 + NZ_CP034465.1 Jeotgalibaca ciconiae
427 890924 891193 + NZ_CP042430.1 Baekduia soli
428 1692182 1692400 + NC_014364.1 Sediminispirochaeta smaragdinae DSM 11293
429 108199 108465 - NC_014506.1 Sulfurimonas autotrophica DSM 16294
430 1267836 1268078 + NC_023035.1 Salinispira pacifica
431 1713292 1713558 + NZ_CP035946.1 Campylobacter canadensis
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_LR134340.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF03748.16 0.8 332 2683 same-strand Flagellar basal body-associated protein FliL
2 PF02154.17 0.9 372 1703 same-strand Flagellar motor switch protein FliM
3 PF01052.22 0.92 380 1534 same-strand Type III flagellar switch regulator (C-ring) FliN C-term
4 PF04347.15 0.87 359 782 same-strand Flagellar biosynthesis protein, FliO
5 PF00813.22 0.94 390 17.0 same-strand FliP family
6 PF01311.22 0.93 385 8 same-strand Bacterial export proteins, family 1
++ More..