Result : P0AB40
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Multiple stress resistance protein BhsA (Copper-induced outer membrane component) |
| NCBI Accession ID | U00096.3 |
| Organism | Escherichia coli (strain K12) |
| Left | 1169073 |
| Right | 1169330 |
| Strand | + |
| Nucleotide Sequence | ATGAAAAACGTAAAAACCCTCATCGCTGCGGCGATTTTAAGCTCCATGTCATTTGCCAGCTTTGCGGCTGTCGAAGTTCAGTCAACGCCAGAAGGCCAACAAAAAGTCGGTACAATCAGTGCTAACGCGGGGACAAATCTGGGATCGCTGGAAGAGCAGCTGGCGCAAAAAGCGGATGAGATGGGCGCAAAATCTTTCCGTATTACTTCTGTAACCGGTCCGAATACCCTCCATGGAACAGCAGTAATTTATAAATAA |
| Sequence | MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISANAGTNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGTAVIYK |
| Source of smORF | Swiss-Prot |
| Function | Reduces the permeability of the outer membrane to copper. Seems to be involved in the regulation of biofilm formation. May decrease biofilm formation by repressing cell-cell interaction and cell surface interaction. {ECO:0000269|Pubmed:17293424, ECO:0000269|Pubmed:22089859}. |
| Pubmed ID | 8905232 9278503 16738553 17293424 22089859 |
| Domain | CDD:416304 |
| Functional Category | Others |
| Uniprot ID | P0AB40 |
| ORF Length (Amino Acid) | 85 |
++ More..
| Conservation Analysis |
No. of Species: 110
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1750113 | 1750370 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 2 | 1169073 | 1169330 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 3 | 1528338 | 1528595 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 4 | 1809940 | 1810197 | + | NZ_LR134340.1 | Escherichia marmotae |
| 5 | 1174891 | 1175148 | + | NZ_AP014857.1 | Escherichia albertii |
| 6 | 1692888 | 1693145 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 7 | 4684406 | 4684663 | + | NZ_CP033744.1 | Citrobacter freundii |
| 8 | 4368557 | 4368817 | - | NZ_CP033744.1 | Citrobacter freundii |
| 9 | 377237 | 377494 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 10 | 743437 | 743697 | + | NZ_CP044098.1 | Citrobacter portucalensis |
| 11 | 1297418 | 1297675 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 12 | 680817 | 681074 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 13 | 1816841 | 1817098 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 14 | 1156859 | 1157071 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 15 | 1811166 | 1811423 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 16 | 979726 | 979983 | + | NZ_CP017279.1 | Enterobacter ludwigii |
| 17 | 3687713 | 3687970 | + | NZ_CP053416.1 | Salmonella bongori |
| 18 | 548425 | 548682 | + | NZ_CP038469.1 | Citrobacter tructae |
| 19 | 1265545 | 1265802 | + | NC_013716.1 | Citrobacter rodentium ICC168 |
| 20 | 1828030 | 1828287 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 21 | 4289725 | 4289982 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 22 | 3465236 | 3465493 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 23 | 2733224 | 2733481 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 24 | 2734466 | 2734723 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 25 | 1786335 | 1786592 | + | NC_015968.1 | Enterobacter soli |
| 26 | 742282 | 742539 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 27 | 2978090 | 2978347 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 28 | 3605223 | 3605480 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 29 | 1762001 | 1762258 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 30 | 2034254 | 2034511 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 31 | 3554867 | 3555124 | - | NZ_CP050508.1 | Raoultella terrigena |
| 32 | 3815666 | 3815923 | + | NZ_CP026047.1 | Raoultella planticola |
| 33 | 3438673 | 3438930 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 34 | 3240877 | 3241134 | - | NZ_CP041247.1 | Raoultella electrica |
| 35 | 3553139 | 3553396 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 36 | 3448491 | 3448748 | - | NZ_CP054254.1 | Klebsiella variicola |
| 37 | 3728515 | 3728772 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 38 | 1798766 | 1799023 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 39 | 3172005 | 3172262 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 40 | 1919717 | 1919974 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 41 | 3200217 | 3200474 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 42 | 2055250 | 2055507 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 43 | 4237520 | 4237777 | + | NZ_CP014007.2 | Kosakonia oryzae |
| 44 | 3259462 | 3259719 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 45 | 2755866 | 2756123 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 46 | 1014057 | 1014314 | - | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 47 | 1936824 | 1937081 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 48 | 862760 | 863017 | - | NZ_CP015113.1 | Kosakonia radicincitans |
| 49 | 1938420 | 1938677 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 50 | 1998361 | 1998618 | + | NZ_CP045300.1 | Kosakonia arachidis |
| 51 | 1104469 | 1104726 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 52 | 2047875 | 2048132 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 53 | 1131862 | 1132119 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 54 | 1530974 | 1531234 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 55 | 1295870 | 1296127 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 56 | 2489001 | 2489258 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 57 | 2432502 | 2432759 | - | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 58 | 2819065 | 2819322 | - | NZ_LR134201.1 | Cedecea lapagei |
| 59 | 1687542 | 1687799 | - | NZ_CP027107.1 | Cronobacter sakazakii |
| 60 | 1760490 | 1760747 | + | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 61 | 2562141 | 2562398 | + | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 62 | 1710817 | 1711074 | + | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 63 | 3045737 | 3045994 | - | NZ_CP023525.1 | Cedecea neteri |
| 64 | 2321775 | 2322032 | - | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 65 | 1723520 | 1723777 | + | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 66 | 3146396 | 3146653 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 67 | 2695466 | 2695726 | - | NZ_CP020388.1 | Pluralibacter gergoviae |
| 68 | 2447104 | 2447361 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 69 | 2819830 | 2820087 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 70 | 2029097 | 2029354 | + | NZ_CP038853.1 | Pantoea vagans |
| 71 | 2028802 | 2029059 | + | NZ_CP038853.1 | Pantoea vagans |
| 72 | 2029680 | 2029937 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 73 | 2029977 | 2030234 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 74 | 2040555 | 2040812 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 75 | 2040260 | 2040517 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 76 | 2237545 | 2237802 | - | NC_014306.1 | Erwinia billingiae Eb661 |
| 77 | 2237857 | 2238111 | - | NC_014306.1 | Erwinia billingiae Eb661 |
| 78 | 2899504 | 2899761 | - | NZ_CP065640.1 | Serratia rubidaea |
| 79 | 4638579 | 4638839 | + | NZ_CP007230.1 | Yersinia similis |
| 80 | 1521929 | 1522186 | - | NZ_LT906479.1 | Serratia ficaria |
| 81 | 1521467 | 1521724 | - | NZ_LT906479.1 | Serratia ficaria |
| 82 | 3498211 | 3498471 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 83 | 597863 | 598120 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 84 | 597412 | 597672 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 85 | 3034917 | 3035174 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 86 | 4109019 | 4109264 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 87 | 4546995 | 4547252 | + | NC_012880.1 | Musicola paradisiaca Ech703 |
| 88 | 1487826 | 1488083 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 89 | 1488287 | 1488544 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 90 | 1570664 | 1570924 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 91 | 1630534 | 1630791 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 92 | 1639936 | 1640196 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 93 | 1974957 | 1975214 | - | NZ_LN907827.1 | Erwinia gerundensis |
| 94 | 3156616 | 3156876 | + | NZ_CP043727.1 | Yersinia canariae |
| 95 | 2383175 | 2383435 | + | NZ_CP043727.1 | Yersinia canariae |
| 96 | 3167839 | 3168099 | + | NZ_CP011118.1 | Yersinia enterocolitica |
| 97 | 2254577 | 2254837 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 98 | 2301506 | 2301745 | + | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 99 | 2565446 | 2565706 | + | NZ_CP032487.1 | Yersinia hibernica |
| 100 | 1916634 | 1916894 | + | NZ_CP032487.1 | Yersinia hibernica |
| 101 | 27339 | 27596 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 102 | 32561 | 32818 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 103 | 4025049 | 4025306 | + | NZ_CP015749.1 | Pectobacterium parmentieri |
| 104 | 2861141 | 2861401 | - | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 105 | 2082893 | 2083150 | + | NZ_CP067057.1 | Rahnella aceris |
| 106 | 3717007 | 3717264 | - | NZ_CP067057.1 | Rahnella aceris |
| 107 | 2083303 | 2083560 | + | NZ_CP067057.1 | Rahnella aceris |
| 108 | 21715 | 21975 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 109 | 3593386 | 3593643 | + | NZ_CP071320.1 | Serratia ureilytica |
| 110 | 3593837 | 3594094 | + | NZ_CP071320.1 | Serratia ureilytica |
| 111 | 3509603 | 3509863 | + | NZ_CP071320.1 | Serratia ureilytica |
| 112 | 1462215 | 1462472 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 113 | 1461764 | 1462021 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 114 | 1546765 | 1547025 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 115 | 4879259 | 4879516 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 116 | 27091 | 27348 | - | NZ_CP034938.1 | Pectobacterium odoriferum |
| 117 | 1395518 | 1395775 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 118 | 930760 | 931014 | + | NZ_CP048784.1 | Serratia liquefaciens |
| 119 | 1489447 | 1489707 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 120 | 1395979 | 1396236 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 121 | 27098 | 27355 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 122 | 769325 | 769582 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 123 | 768874 | 769131 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 124 | 852902 | 853162 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 125 | 26203 | 26460 | - | NZ_CP038498.1 | Pectobacterium punjabense |
| 126 | 118381 | 118632 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 127 | 4327681 | 4327938 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 128 | 4348930 | 4349190 | - | NZ_CP009787.1 | Yersinia rohdei |
| 129 | 580218 | 580478 | - | NZ_CP009787.1 | Yersinia rohdei |
| 130 | 72973 | 73230 | - | NZ_LT615367.1 | Dickeya aquatica |
| 131 | 4312408 | 4312647 | - | NZ_LT615367.1 | Dickeya aquatica |
| 132 | 4752227 | 4752484 | + | NZ_CP031560.1 | Dickeya dianthicola |
| 133 | 124125 | 124364 | + | NZ_CP031560.1 | Dickeya dianthicola |
| 134 | 512342 | 512602 | + | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 135 | 3744345 | 3744593 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 136 | 2734473 | 2734724 | - | NZ_CP009460.1 | Dickeya fangzhongdai |
| 137 | 2636792 | 2637031 | - | NZ_CP009460.1 | Dickeya fangzhongdai |
| 138 | 4276060 | 4276311 | + | NZ_CP042220.2 | Dickeya poaceiphila |
| 139 | 4205311 | 4205550 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 140 | 472660 | 472911 | + | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 141 | 4801900 | 4802151 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 142 | 4707090 | 4707329 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 143 | 4664271 | 4664522 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 144 | 3678555 | 3678812 | - | NZ_CP011254.1 | Serratia fonticola |
| 145 | 368106 | 368366 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 146 | 3656632 | 3656889 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 147 | 1468834 | 1469091 | - | NZ_LR134494.1 | Serratia quinivorans |
| 148 | 1469296 | 1469553 | - | NZ_LR134494.1 | Serratia quinivorans |
| 149 | 1664332 | 1664589 | - | NZ_CP047495.1 | Pectobacterium brasiliense |
| 150 | 147282 | 147494 | + | NZ_CP025799.1 | Dickeya zeae |
| 151 | 4639212 | 4639469 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 152 | 121719 | 121958 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 153 | 1374689 | 1374940 | + | NZ_CP023536.1 | Providencia alcalifaciens |
| 154 | 2201275 | 2201535 | - | NZ_CP046293.1 | Yersinia intermedia |
| 155 | 2434907 | 2435158 | + | NZ_CP011104.1 | Photorhabdus thracensis |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP061527.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00440.25 | 0.68 | 75 | 248.5 | opposite-strand | Bacterial regulatory proteins, tetR family |
| 2 | PF00005.29 | 0.75 | 82 | 5943.5 | same-strand | ABC transporter |
| 3 | PF02463.21 | 0.65 | 71 | 6210.5 | same-strand | RecF/RecN/SMC N terminal domain |
++ More..