ProsmORF-pred
Result : P0AAS8
Protein Information
Information Type Description
Protein name Uncharacterized protein YbcJ
NCBI Accession ID
Organism Shigella flexneri
Left
Right
Strand
Nucleotide Sequence
Sequence MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
Source of smORF Swiss-Prot
Function Probably binds RNA. {ECO:0000250}.
Pubmed ID 12384590 12704152
Domain CDD:415814
Functional Category RNA-binding
Uniprot ID P0AAS8
ORF Length (Amino Acid) 70
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Conservation Analysis
Conservation Analysis
No. of Species: 248
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 1226220 1226432 - NZ_LR134340.1 Escherichia marmotae
2 4150002 4150214 - NZ_CP057657.1 Escherichia fergusonii
3 475172 475384 - NC_004337.2 Shigella flexneri 2a str. 301
4 556661 556873 - NC_000913.3 Escherichia coli str. K-12 substr. MG1655
5 649114 649326 - NC_002695.2 Escherichia coli O157:H7 str. Sakai
6 549053 549265 - NZ_AP014857.1 Escherichia albertii
7 623753 623965 - NC_013716.1 Citrobacter rodentium ICC168
8 4358899 4359111 + NZ_CP045205.1 Citrobacter telavivensis
9 2435325 2435537 + NC_009792.1 Citrobacter koseri ATCC BAA-895
10 2753054 2753266 - NZ_LT556085.1 Citrobacter amalonaticus
11 602491 602703 - NC_003197.2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
12 1069594 1069806 + NZ_CP044098.1 Citrobacter portucalensis
13 4067164 4067376 - NZ_CP033744.1 Citrobacter freundii
14 1134103 1134315 - NZ_CP015113.1 Kosakonia radicincitans
15 2891826 2892038 + NC_017910.1 Shimwellia blattae DSM 4481 = NBRC 105725
16 4315387 4315599 + NZ_CP050508.1 Raoultella terrigena
17 1106649 1106861 - NZ_CP017184.1 Enterobacter roggenkampii
18 1105295 1105507 - NC_015968.1 Enterobacter soli
19 1401982 1402194 + NZ_CP025034.2 Enterobacter sp. SGAir0187
20 1345656 1345868 - NZ_CP043318.1 Enterobacter chengduensis
21 3924031 3924243 + NZ_CP065838.1 Klebsiella quasipneumoniae
22 1286863 1287075 - NC_016845.1 Klebsiella pneumoniae subsp. pneumoniae HS11286
23 4191770 4191982 + NZ_CP054254.1 Klebsiella variicola
24 1208017 1208229 - NZ_CP012264.1 Cronobacter condimenti 1330
25 1848492 1848704 + NZ_CP016337.1 Kosakonia sacchari
26 1213583 1213795 - NZ_CP063425.1 Kosakonia pseudosacchari
27 2100874 2101086 + NZ_CP038469.1 Citrobacter tructae
28 3410169 3410381 + NZ_CP054058.1 Scandinavium goeteborgense
29 3106364 3106576 - NZ_CP053416.1 Salmonella bongori
30 1813771 1813983 + NZ_CP045300.1 Kosakonia arachidis
31 2337821 2338033 - NZ_CP020388.1 Pluralibacter gergoviae
32 3041171 3041383 - NZ_CP026047.1 Raoultella planticola
33 4200942 4201154 + NZ_CP046672.1 Raoultella ornithinolytica
34 2922595 2922807 + NZ_CP013940.1 Cronobacter malonaticus LMG 23826
35 4014379 4014591 + NZ_CP014007.2 Kosakonia oryzae
36 3959535 3959747 + NZ_CP041247.1 Raoultella electrica
37 3395643 3395855 + NZ_CP045845.1 Kluyvera intermedia
38 2830008 2830220 + NZ_CP012268.1 Cronobacter muytjensii ATCC 51329
39 1147457 1147669 - NZ_CP027986.1 Enterobacter sichuanensis
40 3913344 3913556 + NZ_LR134475.1 Klebsiella aerogenes
41 1216381 1216593 - NZ_CP012266.1 Cronobacter dublinensis subsp. dublinensis LMG 23823
42 262949 263161 - NZ_CP017279.1 Enterobacter ludwigii
43 2214577 2214789 + NZ_CP027107.1 Cronobacter sakazakii
44 3415558 3415770 + NZ_CP035129.1 Kosakonia cowanii
45 4443924 4444136 + NZ_CP036175.1 Klebsiella huaxiensis
46 1211557 1211769 - NZ_CP012257.1 Cronobacter universalis NCTC 9529
47 1180976 1181188 - NZ_CP009756.1 Enterobacter cloacae
48 533263 533475 + NZ_CP042941.1 Atlantibacter hermannii
49 1158242 1158454 - NZ_AP022508.1 Enterobacter bugandensis
50 4549315 4549527 + NZ_CP051548.1 Phytobacter diazotrophicus
51 3319012 3319224 + NZ_CP011602.1 Phytobacter ursingii
52 1226115 1226327 - NZ_CP012871.1 [Enterobacter] lignolyticus
53 3664186 3664398 - NZ_AP019007.1 Enterobacter oligotrophicus
54 60116 60328 - NZ_CP023529.1 Lelliottia amnigena
55 3640852 3641064 + NZ_CP013990.1 Leclercia adecarboxylata
56 4600850 4601062 + NZ_CP060111.1 Klebsiella michiganensis
57 2544194 2544406 - NZ_CP040428.1 Jejubacter calystegiae
58 2386395 2386607 + NZ_CP045769.1 Enterobacter cancerogenus
59 1345712 1345924 + NZ_CP014136.1 Gibbsiella quercinecans
60 1183098 1183310 - NZ_CP015581.1 Tatumella citrea
61 3400491 3400703 + NC_017554.1 Pantoea ananatis PA13
62 3006860 3007072 + NZ_CP038853.1 Pantoea vagans
63 3378952 3379164 - NZ_LR134201.1 Cedecea lapagei
64 3676148 3676360 - NZ_CP023525.1 Cedecea neteri
65 3981027 3981239 - NZ_CP049115.1 Pantoea stewartii
66 1049917 1050129 - NZ_CP034148.1 Pantoea agglomerans
67 3070295 3070507 + NZ_CP045720.1 Pantoea eucalypti
68 3239265 3239477 - NZ_AP023184.1 Buttiauxella agrestis
69 1290940 1291152 - NC_014306.1 Erwinia billingiae Eb661
70 1559917 1560129 - NZ_CP065044.1 Pectobacterium aroidearum
71 1136698 1136910 - NZ_LN907827.1 Erwinia gerundensis
72 1158884 1159096 - NZ_CP023567.1 Erwinia pyrifoliae
73 1344474 1344686 - NZ_CP026377.1 Mixta gaviniae
74 2742703 2742915 + NC_010694.1 Erwinia tasmaniensis Et1/99
75 330560 330772 + NZ_CP015750.1 Pectobacterium wasabiae CFBP 3304
76 2892662 2892874 + NC_012779.2 Edwardsiella ictaluri 93-146
77 759684 759896 + NZ_CP006664.1 Edwardsiella anguillarum ET080813
78 3111112 3111324 - NZ_CP047495.1 Pectobacterium brasiliense
79 1271464 1271676 - NZ_CP061511.1 Mixta calida
80 2553044 2553256 - NZ_CP023706.1 Edwardsiella tarda
81 1447383 1447595 - NZ_CP051652.1 Pectobacterium carotovorum
82 3435123 3435335 + NZ_CP034938.1 Pectobacterium odoriferum
83 2230822 2231034 + NZ_CP017482.1 Pectobacterium polaris
84 3440719 3440931 + NZ_CP009125.1 Pectobacterium atrosepticum
85 327294 327506 + NZ_CP019706.1 Pantoea alhagi
86 1131664 1131876 - NC_013961.1 Erwinia amylovora CFBP1430
87 2668615 2668827 + NZ_CP015749.1 Pectobacterium parmentieri
88 3295507 3295719 + NZ_CP038498.1 Pectobacterium punjabense
89 513737 513949 - NZ_CP028271.1 Mixta intestinalis
90 2520243 2520455 - NZ_CP054043.1 Yersinia mollaretii ATCC 43969
91 1195182 1195394 - NZ_CP046293.1 Yersinia intermedia
92 861140 861352 - NZ_CP016043.1 Edwardsiella hoshinae
93 2811380 2811592 + NZ_CP032487.1 Yersinia hibernica
94 1142800 1143012 - NZ_CP050150.1 Hafnia alvei
95 3321095 3321307 - NZ_CP011078.1 Yersinia ruckeri
96 4111535 4111747 - NZ_CP009787.1 Yersinia rohdei
97 1446244 1446456 + NZ_CP009781.1 Yersinia aldovae 670-83
98 3363430 3363642 + NZ_CP043727.1 Yersinia canariae
99 3387581 3387793 + NZ_CP011118.1 Yersinia enterocolitica
100 672890 673102 + NZ_CP015137.1 Dickeya solani IPO 2222
101 2690616 2690828 - NZ_CP065640.1 Serratia rubidaea
102 2698525 2698737 + NZ_CP034035.1 Brenneria rubrifaciens
103 3463766 3463978 + NZ_CP031560.1 Dickeya dianthicola
104 1132216 1132428 - NZ_CP042220.2 Dickeya poaceiphila
105 3307509 3307721 + NZ_LR134373.1 Yersinia pseudotuberculosis
106 3267663 3267875 + NZ_CP025799.1 Dickeya zeae
107 4342806 4343018 - NZ_CP016176.1 Xenorhabdus hominickii
108 1273831 1274043 - NZ_LT906479.1 Serratia ficaria
109 2895132 2895344 - NZ_CP007230.1 Yersinia similis
110 3910589 3910801 + NZ_CP029736.1 Providencia rettgeri
111 3846077 3846289 + NZ_CP071320.1 Serratia ureilytica
112 2628943 2629155 + NZ_CP031123.2 Providencia huaxiensis
113 1187626 1187838 - NC_013892.1 Xenorhabdus bovienii SS-2004
114 179719 179931 + NZ_CP060401.1 Xenorhabdus nematophila
115 3339931 3340143 - NZ_CP011254.1 Serratia fonticola
116 1142114 1142326 - NZ_CP048784.1 Serratia liquefaciens
117 1210730 1210942 - NZ_LR134494.1 Serratia quinivorans
118 2281432 2281650 + NZ_CP067057.1 Rahnella aceris
119 2901960 2902172 + NZ_CP047349.1 Proteus terrae subsp. cibarius
120 907242 907454 - NZ_CP072455.1 Xenorhabdus budapestensis
121 4813477 4813689 + NZ_CP007044.2 Chania multitudinisentens RB-25
122 1208365 1208577 - NZ_CP038662.1 Serratia nematodiphila
123 2068806 2069018 - NZ_CP023536.1 Providencia alcalifaciens
124 2629680 2629892 + NZ_CP065534.1 Lonsdalea populi
125 4263152 4263364 - NZ_CP009460.1 Dickeya fangzhongdai
126 518857 519069 - NZ_CP016948.1 Serratia surfactantfaciens
127 1208174 1208386 - NC_015567.1 Serratia plymuthica AS9
128 1148832 1149044 - NC_012962.1 Photorhabdus asymbiotica
129 1265926 1266138 - NZ_LS483422.1 Providencia heimbachae
130 1269608 1269820 - NZ_CP048796.1 Providencia vermicola
131 3460796 3461008 + NC_014500.1 Dickeya dadantii 3937
132 765287 765499 - NZ_CP011104.1 Photorhabdus thracensis
133 927570 927782 - NZ_FO704550.1 Xenorhabdus doucetiae
134 3818523 3818735 + NZ_CP023009.1 Lonsdalea britannica
135 1165802 1166014 - NZ_LT615367.1 Dickeya aquatica
136 1415552 1415764 - NC_012912.1 Dickeya chrysanthemi Ech1591
137 2336649 2336861 + NC_010554.1 Proteus mirabilis HI4320
138 317383 317598 - NZ_FO704551.1 Xenorhabdus poinarii G6
139 621673 621885 - NZ_CP014137.1 Brenneria goodwinii
140 623869 624081 + NZ_CP026364.1 Proteus hauseri
141 3112505 3112717 + NC_012880.1 Musicola paradisiaca Ech703
142 1404503 1404715 - NZ_CP034036.1 Brenneria nigrifluens DSM 30175 = ATCC 13028
143 5041963 5042175 - NC_005126.1 Photorhabdus laumondii subsp. laumondii TTO1
144 3373348 3373560 + NZ_CP006569.1 Sodalis praecaptivus
145 1770573 1770785 + NZ_CP040449.1 Aeromonas simiae
146 2468099 2468311 + NZ_CP031222.1 Aquirhabdus parva
147 1205985 1206218 + NZ_CP044060.1 Aeromonas veronii
148 1395826 1396059 + NZ_CP065745.1 Aeromonas allosaccharophila
149 2235086 2235319 - NZ_CP050851.1 Aeromonas hydrophila
150 2430233 2430466 + NZ_LR134376.1 Aeromonas encheleia
151 2247106 2247339 - NZ_AP022188.1 Aeromonas media
152 1414880 1415113 + NZ_CP051883.1 Aeromonas salmonicida
153 6224862 6225077 - NZ_CP063458.1 Humisphaera borealis
154 3599144 3599317 + NZ_CP012621.1 Zobellella denitrificans
155 3088984 3089193 + NC_007498.2 Syntrophotalea carbinolica DSM 2380
156 2238771 2238980 - NC_014836.1 Desulfurispirillum indicum S5
157 697300 697515 + NZ_LT906482.1 Eikenella corrodens
158 2134742 2134957 - NZ_CP021377.1 Oceanisphaera profunda
159 2563985 2564200 - NZ_CP021376.1 Oceanisphaera avium
160 1584811 1585026 - NZ_CP038018.1 Eikenella exigua
161 4178886 4179068 + NZ_CP011930.1 Herbaspirillum seropedicae
162 1133703 1133912 + NZ_AP018725.1 Sulfuriflexus mobilis
163 1201456 1201692 + NZ_CP059569.1 Kingella oralis
164 2019164 2019343 + NC_016901.1 Shewanella baltica OS678
165 1428024 1428254 + NZ_CP069213.1 Shewanella litorisediminis
166 1551255 1551485 + NC_008700.1 Shewanella amazonensis SB2B
167 3294683 3294892 - NC_010334.1 Shewanella halifaxensis HAW-EB4
168 2319563 2319787 + NZ_CP007446.1 Snodgrassella alvi wkB2
169 4128903 4129124 + NZ_CP037993.1 Herbaspirillum huttiense
170 976279 976509 + NZ_CP020373.1 Shewanella khirikhana
171 1877730 1877939 + NZ_CP010311.1 Geoalkalibacter subterraneus
172 1109155 1109370 - NZ_LR134533.1 Neisseria weaveri
173 1387289 1387510 - NZ_LS483377.1 Stenotrophomonas maltophilia
174 1586278 1586478 + NZ_CP022272.1 Shewanella marisflavi
175 2904686 2904895 - NC_009092.1 Shewanella loihica PV-4
176 1795499 1795669 + NZ_CP022358.1 Shewanella bicestrii
177 1585429 1585653 - NZ_CP011131.1 Lysobacter gummosus
178 848521 848754 - NZ_LR134313.1 Neisseria canis
179 3358610 3358816 - NC_011566.1 Shewanella piezotolerans WP3
180 3351486 3351689 - NC_014012.1 Shewanella violacea DSS12
181 1251021 1251197 + NZ_AP019312.1 Chromobacterium haemolyticum
182 4268118 4268339 + NZ_CP013737.1 Herbaspirillum rubrisubalbicans M1
183 4979524 4979745 - NZ_CP018845.1 Herbaspirillum robiniae
184 2481356 2481535 + NZ_CP018839.1 Thauera chlorobenzoica
185 2068240 2068443 - NZ_CP014782.1 Shewanella psychrophila
186 2871398 2871619 + NZ_CP023406.1 Luteimonas chenhongjianii
187 1258152 1258373 - NZ_CP009832.1 Burkholderia multivorans ATCC BAA-247
188 7910840 7911043 - NZ_CP045572.1 Nonomuraea nitratireducens
189 4267337 4267561 + NZ_CP023465.1 Lysobacter capsici
190 440603 440812 - NZ_CP015519.1 Syntrophotalea acetylenivorans
191 2886013 2886234 - NZ_CP009555.1 Burkholderia oklahomensis C6786
192 3761830 3762033 - NC_010506.1 Shewanella woodyi ATCC 51908
193 3017832 3018050 - NZ_CP047385.1 Pandoraea fibrosis
194 2125943 2126161 - NZ_LT906435.1 Pandoraea sputorum
195 3382450 3382668 + NZ_CP013481.2 Pandoraea apista
196 2318455 2318652 - NZ_CP025682.1 Azoarcus pumilus
197 1394850 1395065 + NZ_CP059563.1 Conchiformibius steedae
198 1379008 1379226 + NC_022357.1 Sulfuricella denitrificans skB26
199 3039534 3039752 + NZ_CP011807.3 Pandoraea faecigallinarum
200 4357909 4358079 + NZ_CP011129.1 Lysobacter antibioticus
201 3293759 3293977 + NZ_CP011253.3 Pandoraea oxalativorans
202 3523492 3523689 - NZ_CP047241.1 Aquitalea denitrificans
203 2224301 2224519 - NZ_CP022989.1 Paraburkholderia aromaticivorans
204 1407400 1407615 - NC_014207.1 Methylotenera versatilis 301
205 296825 297034 + NZ_CP010802.1 Desulfuromonas soudanensis
206 1566041 1566220 + NZ_CP028339.1 Thauera aromatica K172
207 7342661 7342882 - NC_013595.1 Streptosporangium roseum DSM 43021
208 4425364 4425576 - NZ_CP060084.1 Teredinibacter haidensis
209 3318232 3318450 + NZ_CP062803.1 Cupriavidus basilensis
210 1886448 1886651 + NC_009831.1 Shewanella sediminis HAW-EB3
211 1898940 1899161 - NC_007651.1 Burkholderia thailandensis E264
212 2371880 2372101 + NZ_CP046570.1 Xanthomonas albilineans
213 3227169 3227387 - NZ_CP035900.1 Burkholderia glumae
214 2757008 2757229 + NZ_CP029843.1 Lysobacter maris
215 1571629 1571823 + NZ_CP031252.1 Neisseria elongata
216 1218648 1218818 - NZ_CP041242.1 Lysobacter alkalisoli
217 1211215 1211433 - NZ_CP013459.1 Burkholderia stagnalis
218 1451844 1452014 - NZ_CP037883.1 Stenotrophomonas indicatrix
219 1085435 1085653 - NZ_CP002580.1 Burkholderia plantarii
220 3152638 3152835 + NC_023018.2 Pandoraea pnomenusa
221 3372341 3372559 + NZ_CP010897.2 Pandoraea vervacti
222 336089 336307 - NZ_CP017561.1 Paraburkholderia sprentiae WSM5005
223 4395273 4395497 + NZ_AP014940.1 Lysobacter enzymogenes
224 941980 942198 - NZ_CP026111.1 Paraburkholderia terrae
225 3538516 3538737 - NZ_CP043476.1 Xanthomonas hyacinthi
226 643055 643288 + NZ_CP046027.1 Neisseria brasiliensis
227 3984001 3984237 - NZ_CP013729.1 Roseateles depolymerans
228 2799549 2799725 + NZ_CP012900.1 Stenotrophomonas acidaminiphila
229 3319636 3319851 + NZ_CP029495.1 Chromobacterium phragmitis
230 2102289 2102510 + NC_021287.1 Caballeronia insecticola
231 2216997 2217179 + NZ_AP014724.1 Sulfurospirillum cavolei
232 2752732 2752956 + NC_010524.1 Leptothrix cholodnii SP-6
233 798248 798463 + NZ_CP043473.1 Chromobacterium paludis
234 2722821 2723057 + NZ_CP032519.1 Cupriavidus oxalaticus
235 3015296 3015514 + NZ_CP039287.1 Cupriavidus necator H16
236 2347591 2347809 - NC_013959.1 Sideroxydans lithotrophicus ES-1
237 1784822 1785043 + NZ_CP071517.1 Lysobacter arenosi
238 2195536 2195757 + NC_017857.3 Methylophaga nitratireducenticrescens
239 2211250 2211471 + NZ_CP046909.1 Paraburkholderia acidiphila
240 1994426 1994596 - NZ_CP060731.1 Pseudoxanthomonas mexicana
241 2343848 2344069 - NZ_CP060820.1 Lysobacter solisilvae (ex Woo and Kim 2020)
242 2042052 2042267 + NZ_CP039731.1 Aquitalea aquatilis
243 4693455 4693670 + NZ_CP017707.1 Chromobacterium vaccinii
244 2991765 2991989 + NZ_CP046603.1 Lysobacter soli
245 2645828 2646043 + NZ_CP064030.1 Dyella caseinilytica
246 1514429 1514602 - NC_020541.1 Rhodanobacter denitrificans
247 2289832 2290044 - NZ_CP051183.1 Bermanella marisrubri
248 1831215 1831430 + NC_005085.1 Chromobacterium violaceum ATCC 12472
249 790985 791212 + NZ_CP042218.1 Luteimonas granuli
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