Result : P0A9N1
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Phosphocarrier protein NPr (Nitrogen-related HPr) |
| NCBI Accession ID | AE014075.1 |
| Organism | Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) |
| Left | 3781459 |
| Right | 3781731 |
| Strand | + |
| Nucleotide Sequence | ATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGCCTGCAATGAAGCTGTTTGAATTAATGCAGGGTTTTGACGCTGAAGTGCTGTTACGTAATGACGAAGGCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGCACTGGCCGCCGTTATCGCCCTCTTTAACTCTGGTTTTGATGAAGATTAA |
| Sequence | MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEAEANSVIALLMLDSAKGRQIEVEATGPQEEEALAAVIALFNSGFDED |
| Source of smORF | Swiss-Prot |
| Function | Component of the phosphoenolpyruvate-dependent nitrogen-metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein NPr by enzyme I-Ntr. Phospho-NPr then transfers it to EIIA-Ntr. Could function in the transcriptional regulation of sigma-54 dependent operons in conjunction with the NPr (PtsO) and EIIA-Ntr (PtsN) proteins. {ECO:0000250}. |
| Pubmed ID | 12471157 |
| Domain | CDD:412221 |
| Functional Category | Others |
| Uniprot ID | P0A9N1 |
| ORF Length (Amino Acid) | 90 |
++ More..
| Conservation Analysis |
No. of Species: 169
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 468632 | 468904 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 2 | 3340134 | 3340406 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 3 | 3347966 | 3348238 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 4 | 4090447 | 4090719 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 5 | 1920002 | 1920274 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 6 | 4184924 | 4185196 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 7 | 4181924 | 4182196 | + | NC_015968.1 | Enterobacter soli |
| 8 | 3120162 | 3120434 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 9 | 4290893 | 4291165 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 10 | 4217133 | 4217405 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 11 | 4166465 | 4166737 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 12 | 4524940 | 4525212 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 13 | 4095954 | 4096226 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 14 | 4171040 | 4171312 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 15 | 3853119 | 3853391 | + | NZ_LR134340.1 | Escherichia marmotae |
| 16 | 3331525 | 3331797 | + | NZ_AP014857.1 | Escherichia albertii |
| 17 | 1342581 | 1342853 | + | NZ_CP053416.1 | Salmonella bongori |
| 18 | 3487666 | 3487938 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 19 | 1754318 | 1754590 | - | NZ_LT556085.1 | Citrobacter amalonaticus |
| 20 | 2927638 | 2927910 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 21 | 555589 | 555861 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 22 | 4872207 | 4872479 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 23 | 2153570 | 2153842 | + | NZ_CP033744.1 | Citrobacter freundii |
| 24 | 4251316 | 4251588 | + | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 25 | 3925660 | 3925932 | - | NZ_CP038469.1 | Citrobacter tructae |
| 26 | 2610618 | 2610890 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 27 | 4360682 | 4360954 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 28 | 4788057 | 4788329 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 29 | 2272628 | 2272900 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 30 | 5370943 | 5371215 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 31 | 1075779 | 1076051 | - | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 32 | 5238569 | 5238841 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 33 | 2887465 | 2887737 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 34 | 509114 | 509386 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 35 | 512953 | 513225 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 36 | 4766785 | 4767057 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 37 | 526672 | 526944 | - | NZ_CP054254.1 | Klebsiella variicola |
| 38 | 535938 | 536210 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 39 | 3641787 | 3642059 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 40 | 4089519 | 4089791 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 41 | 519351 | 519623 | - | NZ_CP050508.1 | Raoultella terrigena |
| 42 | 546614 | 546886 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 43 | 602693 | 602965 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 44 | 641317 | 641589 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 45 | 500736 | 501008 | - | NZ_CP041247.1 | Raoultella electrica |
| 46 | 1172092 | 1172364 | + | NZ_CP026047.1 | Raoultella planticola |
| 47 | 551048 | 551320 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 48 | 495117 | 495389 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 49 | 347144 | 347416 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 50 | 486692 | 486964 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 51 | 449681 | 449953 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 52 | 2205589 | 2205861 | + | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 53 | 677209 | 677481 | + | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 54 | 4165812 | 4166084 | + | NZ_CP043727.1 | Yersinia canariae |
| 55 | 523934 | 524206 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 56 | 4227722 | 4227994 | + | NZ_CP032487.1 | Yersinia hibernica |
| 57 | 2445917 | 2446189 | + | NZ_CP009787.1 | Yersinia rohdei |
| 58 | 3713824 | 3714096 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 59 | 3589130 | 3589402 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 60 | 357508 | 357780 | - | NZ_CP046293.1 | Yersinia intermedia |
| 61 | 437600 | 437872 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 62 | 1113530 | 1113802 | + | NZ_CP011254.1 | Serratia fonticola |
| 63 | 2989384 | 2989656 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 64 | 386926 | 387198 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 65 | 1555113 | 1555385 | - | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 66 | 1053594 | 1053866 | + | NZ_CP007230.1 | Yersinia similis |
| 67 | 323769 | 324041 | - | NZ_LR134201.1 | Cedecea lapagei |
| 68 | 487313 | 487585 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 69 | 4626054 | 4626326 | + | NZ_LT906479.1 | Serratia ficaria |
| 70 | 955571 | 955843 | + | NZ_CP065640.1 | Serratia rubidaea |
| 71 | 498240 | 498512 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 72 | 1769478 | 1769750 | + | NZ_CP011078.1 | Yersinia ruckeri |
| 73 | 3243750 | 3244022 | - | NZ_CP014136.1 | Gibbsiella quercinecans |
| 74 | 4229865 | 4230137 | + | NZ_CP006569.1 | Sodalis praecaptivus |
| 75 | 1151695 | 1151967 | + | NZ_CP042941.1 | Atlantibacter hermannii |
| 76 | 320536 | 320808 | - | NZ_CP023525.1 | Cedecea neteri |
| 77 | 3880970 | 3881242 | + | NZ_CP016948.1 | Serratia surfactantfaciens |
| 78 | 452757 | 453029 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 79 | 4773042 | 4773314 | + | NZ_LR134494.1 | Serratia quinivorans |
| 80 | 4721153 | 4721425 | + | NZ_CP048784.1 | Serratia liquefaciens |
| 81 | 4505397 | 4505669 | + | NZ_CP051652.1 | Pectobacterium carotovorum |
| 82 | 339832 | 340104 | - | NZ_CP034938.1 | Pectobacterium odoriferum |
| 83 | 4105801 | 4106073 | - | NZ_CP017482.1 | Pectobacterium polaris |
| 84 | 526101 | 526373 | - | NZ_CP071320.1 | Serratia ureilytica |
| 85 | 4663660 | 4663932 | + | NZ_CP038662.1 | Serratia nematodiphila |
| 86 | 1267508 | 1267780 | + | NZ_CP047495.1 | Pectobacterium brasiliense |
| 87 | 350602 | 350874 | - | NZ_CP038498.1 | Pectobacterium punjabense |
| 88 | 373340 | 373612 | - | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 89 | 4596990 | 4597262 | + | NZ_CP065044.1 | Pectobacterium aroidearum |
| 90 | 2105669 | 2105941 | - | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 91 | 4082063 | 4082335 | + | NC_017554.1 | Pantoea ananatis PA13 |
| 92 | 4830629 | 4830901 | + | NC_015567.1 | Serratia plymuthica AS9 |
| 93 | 4505366 | 4505638 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 94 | 2441768 | 2442040 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 95 | 487025 | 487297 | - | NZ_CP061511.1 | Mixta calida |
| 96 | 386483 | 386755 | - | NZ_LT615367.1 | Dickeya aquatica |
| 97 | 3743820 | 3744092 | + | NZ_CP015749.1 | Pectobacterium parmentieri |
| 98 | 337352 | 337624 | - | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 99 | 625214 | 625486 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 100 | 4244731 | 4245003 | + | NC_012880.1 | Musicola paradisiaca Ech703 |
| 101 | 4062879 | 4063151 | + | NZ_CP042220.2 | Dickeya poaceiphila |
| 102 | 3598075 | 3598347 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 103 | 373173 | 373445 | - | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 104 | 4317481 | 4317753 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 105 | 214918 | 215190 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 106 | 4322895 | 4323167 | - | NZ_CP028271.1 | Mixta intestinalis |
| 107 | 561792 | 562064 | - | NZ_CP026377.1 | Mixta gaviniae |
| 108 | 1104350 | 1104622 | + | NZ_CP019706.1 | Pantoea alhagi |
| 109 | 3325922 | 3326194 | - | NZ_CP049115.1 | Pantoea stewartii |
| 110 | 340643 | 340915 | - | NZ_CP025799.1 | Dickeya zeae |
| 111 | 4450724 | 4450996 | + | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 112 | 503765 | 504037 | - | NZ_LN907827.1 | Erwinia gerundensis |
| 113 | 3122652 | 3122924 | + | NZ_CP067057.1 | Rahnella aceris |
| 114 | 3673806 | 3674078 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 115 | 1409584 | 1409856 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 116 | 406031 | 406303 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 117 | 3664466 | 3664738 | + | NZ_CP038853.1 | Pantoea vagans |
| 118 | 194017 | 194289 | - | NZ_CP015581.1 | Tatumella citrea |
| 119 | 329311 | 329583 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 120 | 3928329 | 3928601 | + | NZ_CP050150.1 | Hafnia alvei |
| 121 | 3170883 | 3171155 | + | NZ_CP016043.1 | Edwardsiella hoshinae |
| 122 | 2497925 | 2498197 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 123 | 338775 | 339047 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 124 | 561260 | 561532 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 125 | 2272870 | 2273142 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 126 | 3849575 | 3849847 | + | NZ_CP014137.1 | Brenneria goodwinii |
| 127 | 3533776 | 3534048 | + | NZ_CP065534.1 | Lonsdalea populi |
| 128 | 4141161 | 4141433 | - | NZ_LR134376.1 | Aeromonas encheleia |
| 129 | 4377061 | 4377333 | - | NZ_CP050851.1 | Aeromonas hydrophila |
| 130 | 1144606 | 1144878 | + | NZ_CP023706.1 | Edwardsiella tarda |
| 131 | 3084593 | 3084865 | - | NZ_CP051883.1 | Aeromonas salmonicida |
| 132 | 4733225 | 4733497 | + | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 133 | 492242 | 492514 | + | NZ_AP022188.1 | Aeromonas media |
| 134 | 4284306 | 4284578 | + | NC_012962.1 | Photorhabdus asymbiotica |
| 135 | 2864604 | 2864876 | - | NZ_CP044060.1 | Aeromonas veronii |
| 136 | 3115784 | 3116056 | - | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 137 | 3032483 | 3032755 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 138 | 3810170 | 3810442 | - | NZ_CP060401.1 | Xenorhabdus nematophila |
| 139 | 3786472 | 3786744 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 140 | 3723851 | 3724123 | + | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 141 | 477770 | 478042 | - | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 142 | 3700442 | 3700714 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 143 | 3023481 | 3023753 | - | NZ_CP040449.1 | Aeromonas simiae |
| 144 | 3230606 | 3230878 | + | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 145 | 512303 | 512575 | - | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 146 | 1634831 | 1635103 | - | NZ_CP023536.1 | Providencia alcalifaciens |
| 147 | 3665830 | 3666102 | + | NZ_CP048796.1 | Providencia vermicola |
| 148 | 3983144 | 3983416 | - | NC_010554.1 | Proteus mirabilis HI4320 |
| 149 | 3052094 | 3052366 | + | NZ_CP031123.2 | Providencia huaxiensis |
| 150 | 2102515 | 2102787 | - | NZ_CP026364.1 | Proteus hauseri |
| 151 | 1536545 | 1536817 | - | NZ_CP029736.1 | Providencia rettgeri |
| 152 | 3531421 | 3531693 | + | NZ_LS483422.1 | Providencia heimbachae |
| 153 | 367526 | 367756 | - | NZ_CP040021.1 | Salinivibrio kushneri |
| 154 | 388038 | 388313 | - | NZ_CP047475.1 | Vibrio astriarenae |
| 155 | 2418605 | 2418844 | + | NZ_CP022741.1 | Vibrio qinghaiensis |
| 156 | 2232628 | 2232897 | + | NZ_CP035688.1 | Vibrio metoecus |
| 157 | 2510685 | 2510918 | + | NZ_CP033078.1 | Vibrio zhugei |
| 158 | 2575232 | 2575489 | + | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 159 | 74485 | 74718 | + | NZ_CP040990.1 | Vibrio furnissii |
| 160 | 624382 | 624636 | - | NZ_AP018685.1 | Vibrio rumoiensis |
| 161 | 3068680 | 3068958 | + | NZ_AP014635.1 | Vibrio tritonius |
| 162 | 555630 | 555908 | - | NC_011312.1 | Aliivibrio salmonicida LFI1238 |
| 163 | 2004071 | 2004301 | + | NZ_AP018689.1 | Vibrio aphrogenes |
| 164 | 882201 | 882455 | + | NZ_CP014056.2 | Grimontia hollisae |
| 165 | 315481 | 315759 | - | NZ_CP009354.1 | Vibrio tubiashii ATCC 19109 |
| 166 | 2701694 | 2701948 | - | NZ_CP025792.1 | Vibrio jasicida 090810c |
| 167 | 2826639 | 2826869 | + | NZ_LT960611.1 | Vibrio tapetis subsp. tapetis |
| 168 | 449272 | 449526 | - | NZ_CP031781.1 | Vibrio parahaemolyticus |
| 169 | 3142602 | 3142835 | - | NZ_CP014035.2 | Vibrio fluvialis |
| 170 | 338270 | 338545 | - | NZ_CP071325.1 | Photobacterium ganghwense |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP061527.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF03668.17 | 1.0 | 169 | -3.0 | same-strand | P-loop ATPase protein family |
| 2 | PF00359.24 | 0.99 | 167 | 918.5 | same-strand | Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 |
| 3 | PF02482.21 | 1.0 | 169 | 1506.0 | same-strand | Sigma 54 modulation protein / S30EA ribosomal protein |
| 4 | PF04552.15 | 1.0 | 169 | 1816.0 | same-strand | Sigma-54, DNA binding domain |
| 5 | PF04963.15 | 1.0 | 169 | 1816.0 | same-strand | Sigma-54 factor, core binding domain |
| 6 | PF00309.22 | 0.98 | 166 | 1816 | same-strand | Sigma-54 factor, Activator interacting domain (AID) |
| 7 | PF00005.29 | 1.0 | 169 | 3328 | same-strand | ABC transporter |
| 8 | PF12399.10 | 1.0 | 169 | 3323.0 | same-strand | Branched-chain amino acid ATP-binding cassette transporter |
++ More..