Result : P0A977
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Cold shock-like protein CspF (CSP-F) |
| NCBI Accession ID | AE014075.1 |
| Organism | Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) |
| Left | 3052649 |
| Right | 3052861 |
| Strand | + |
| Nucleotide Sequence | TTGTCCCGTAAAATGACAGGAATTGTCAAAACCTTTGACGGCAAAAGCGGCAAGGGTCTTATCACCCCATCCGATGGTCGTATCGATGTCCAGCTTCATGTTTCAGCGCTCAATCTCCGCGATGCAGAAGAAATTACCACCGGATTACGCGTGGAATTTTGCCGGATAAATGGTCTGCGTGGCCCTTCAGCTGCCAATGTTTACCTTTCATGA |
| Sequence | MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLRGPSAANVYLS |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl09927. Profile Description: N/A. This domain is found at the N-terminus of RsgA domains. It has an OB fold. |
| Pubmed ID | 12471157 |
| Domain | CDD:415806 |
| Functional Category | DNA-binding |
| Uniprot ID | P0A977 |
| ORF Length (Amino Acid) | 70 |
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| Conservation Analysis |
No. of Species: 63
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1641855 | 1642067 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 2 | 1050963 | 1051175 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 3 | 3992737 | 3992949 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 4 | 3057097 | 3057309 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 5 | 3532864 | 3533076 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 6 | 609994 | 610206 | + | NZ_CP033744.1 | Citrobacter freundii |
| 7 | 3774394 | 3774606 | - | NZ_CP033744.1 | Citrobacter freundii |
| 8 | 2957029 | 2957241 | + | NZ_CP033744.1 | Citrobacter freundii |
| 9 | 1061873 | 1062085 | - | NZ_AP014857.1 | Escherichia albertii |
| 10 | 1708731 | 1708943 | - | NZ_LR134340.1 | Escherichia marmotae |
| 11 | 2699771 | 2699983 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 12 | 1038598 | 1038810 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 13 | 1229459 | 1229671 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 14 | 1330822 | 1331034 | - | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 15 | 3736345 | 3736557 | - | NZ_CP053416.1 | Salmonella bongori |
| 16 | 3304273 | 3304485 | + | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 17 | 4118001 | 4118213 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 18 | 2118620 | 2118832 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 19 | 3691975 | 3692187 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 20 | 1451567 | 1451779 | + | NZ_CP045845.1 | Kluyvera intermedia |
| 21 | 2387757 | 2387957 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 22 | 2273338 | 2273538 | - | NZ_CP041247.1 | Raoultella electrica |
| 23 | 2953379 | 2953591 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 24 | 2180783 | 2180995 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 25 | 520764 | 520964 | + | NZ_CP038662.1 | Serratia nematodiphila |
| 26 | 3200560 | 3200772 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 27 | 2557815 | 2558015 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 28 | 4881779 | 4881979 | + | NZ_CP026047.1 | Raoultella planticola |
| 29 | 2378339 | 2378539 | - | NZ_CP050508.1 | Raoultella terrigena |
| 30 | 2597911 | 2598111 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 31 | 2845381 | 2845596 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 32 | 2483997 | 2484209 | - | NZ_AP022508.1 | Enterobacter bugandensis |
| 33 | 299514 | 299726 | - | NZ_CP046293.1 | Yersinia intermedia |
| 34 | 4258605 | 4258817 | + | NZ_CP067057.1 | Rahnella aceris |
| 35 | 4725444 | 4725656 | + | NZ_CP067057.1 | Rahnella aceris |
| 36 | 2156171 | 2156383 | + | NZ_CP048784.1 | Serratia liquefaciens |
| 37 | 707813 | 708025 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 38 | 707345 | 707557 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 39 | 407300 | 407512 | + | NZ_CP045721.1 | Pantoea eucalypti |
| 40 | 407990 | 408202 | + | NZ_CP045721.1 | Pantoea eucalypti |
| 41 | 287356 | 287568 | - | NZ_CP038854.1 | Pantoea vagans |
| 42 | 234186 | 234398 | + | NZ_CP034149.1 | Pantoea agglomerans |
| 43 | 757199 | 757411 | + | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 44 | 4226474 | 4226686 | + | NZ_CP043727.1 | Yersinia canariae |
| 45 | 429697 | 429909 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 46 | 429213 | 429425 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 47 | 428729 | 428941 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 48 | 2922959 | 2923171 | - | NZ_CP071320.1 | Serratia ureilytica |
| 49 | 3145030 | 3145242 | - | NZ_CP038469.1 | Citrobacter tructae |
| 50 | 1876115 | 1876330 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 51 | 2232959 | 2233171 | + | NZ_LT906479.1 | Serratia ficaria |
| 52 | 499596 | 499808 | - | NZ_LN907828.1 | Erwinia gerundensis |
| 53 | 524244 | 524456 | + | NZ_CP006569.1 | Sodalis praecaptivus |
| 54 | 1615745 | 1615957 | - | NZ_CP019706.1 | Pantoea alhagi |
| 55 | 2242584 | 2242796 | + | NZ_LR134494.1 | Serratia quinivorans |
| 56 | 4297365 | 4297577 | + | NZ_LR134494.1 | Serratia quinivorans |
| 57 | 2262647 | 2262859 | + | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 58 | 1129120 | 1129332 | + | NZ_CP007230.1 | Yersinia similis |
| 59 | 1128647 | 1128859 | + | NZ_CP007230.1 | Yersinia similis |
| 60 | 3727883 | 3728095 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 61 | 2113694 | 2113906 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 62 | 5084769 | 5084981 | - | NZ_CP014136.1 | Gibbsiella quercinecans |
| 63 | 1302033 | 1302245 | + | NZ_CP050150.1 | Hafnia alvei |
| 64 | 3501891 | 3502103 | - | NZ_CP050150.1 | Hafnia alvei |
| 65 | 2148433 | 2148645 | + | NC_015567.1 | Serratia plymuthica AS9 |
| 66 | 429583 | 429795 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 67 | 429111 | 429323 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 68 | 428639 | 428851 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 69 | 5060398 | 5060610 | - | NZ_CP011254.1 | Serratia fonticola |
| 70 | 2501731 | 2501943 | + | NZ_CP009787.1 | Yersinia rohdei |
| 71 | 2178105 | 2178317 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 72 | 2294157 | 2294369 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 73 | 986392 | 986604 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 74 | 1838106 | 1838318 | - | NZ_CP015749.1 | Pectobacterium parmentieri |
| 75 | 3968664 | 3968876 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 76 | 3480850 | 3481062 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 77 | 2610105 | 2610317 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 78 | 2703152 | 2703364 | - | NZ_CP034938.1 | Pectobacterium odoriferum |
| 79 | 558020 | 558238 | + | NZ_CP034035.1 | Brenneria rubrifaciens |
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