Result : P0A224
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Protein MxiH |
| NCBI Accession ID | D50601.1 |
| Organism | Shigella sonnei |
| Left | 4179 |
| Right | 4430 |
| Strand | + |
| Nucleotide Sequence | ATGAGTGTTACAGTACCGAATGATGATTGGACACTGAGTTCATTATCTGAAACTTTTGATGATGGAACTCAAACATTACAAGGTGAACTAACATTGGCACTAGATAAATTAGCTAAAAATCCTTCGAATCCACAGTTGCTGGCTGAATACCAAAGTAAATTATCTGAATATACATTATATAGGAACGCGCAATCCAATACAGTGAAAGTGATTAAGGATGTTGATGCTGCAATTATTCAAAACTTCAGATAA |
| Sequence | MSVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR |
| Source of smORF | Swiss-Prot |
| Function | Necessary for the secretion of IPA invasins. {ECO:0000250}. |
| Pubmed ID | |
| Domain | CDD:415677 |
| Functional Category | Others |
| Uniprot ID | P0A224 |
| ORF Length (Amino Acid) | 83 |
++ More..
| Conservation Analysis |
No. of Species: 15
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 119940 | 120191 | + | NC_004851.1 | Shigella flexneri 2a str. 301 |
| 2 | 4656460 | 4656669 | + | NZ_AP019312.1 | Chromobacterium haemolyticum |
| 3 | 3016082 | 3016324 | - | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 4 | 4135894 | 4136169 | + | NZ_CP011254.1 | Serratia fonticola |
| 5 | 836847 | 837086 | - | NZ_CP053416.1 | Salmonella bongori |
| 6 | 2606238 | 2606480 | - | NC_005085.1 | Chromobacterium violaceum ATCC 12472 |
| 7 | 3661707 | 3661964 | + | NZ_CP006569.1 | Sodalis praecaptivus |
| 8 | 2917706 | 2917921 | - | NZ_AP014857.1 | Escherichia albertii |
| 9 | 4965101 | 4965304 | - | NZ_CP017707.1 | Chromobacterium vaccinii |
| 10 | 3720414 | 3720629 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 11 | 860691 | 860960 | - | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 12 | 4089121 | 4089372 | - | NZ_CP029495.1 | Chromobacterium phragmitis |
| 13 | 1995910 | 1996179 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 14 | 1730682 | 1730954 | - | NZ_CP023567.1 | Erwinia pyrifoliae |
| 15 | 2948908 | 2949186 | + | NZ_CP010310.2 | Pandoraea pulmonicola |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_004851.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF09480.12 | 0.93 | 14 | 16.5 | same-strand | Type III secretion system protein PrgH-EprH (PrgH) |
| 2 | PF01514.19 | 1.0 | 15 | 349 | same-strand | Secretory protein of YscJ/FliF family |
| 3 | PF09482.12 | 1.0 | 15 | 1093 | same-strand | Bacterial type III secretion apparatus protein (OrgA MxiK) |
++ More..