Result : P0A1Z7
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Bacterioferritin-associated ferredoxin |
| NCBI Accession ID | AL513382.1 |
| Organism | Salmonella typhi |
| Left | 4231386 |
| Right | 4231580 |
| Strand | + |
| Nucleotide Sequence | ATGTACGTTTGTTTGTGTAATGGTATAAGCGATAAAAAAATCCGCCAGGCTGTACGACAATTTCATCCACAGTCATTTCAACAGTTGCGTAAATTTATTCCTGTGGGAAATCAATGTGGTAAGTGTATTCGCGCCGCGCGAGAAGTGATGCAGGATGAGTTAACGCAAATGCCGGAATTTAAAGAGATCGCCTGA |
| Sequence | MYVCLCNGISDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIRAAREVMQDELTQMPEFKEIA |
| Source of smORF | Swiss-Prot |
| Function | Seems to associate with BFR; could be a general redox and/or regulatory component participating in the iron storage mobilization functions of BFR. Could participate in the release or the delivery of iron from/to bacterioferritin (or other iron complexes) (By similarity). {ECO:0000250}. |
| Pubmed ID | 11677608 12644504 |
| Domain | CDD:412737 |
| Functional Category | Metal-binding |
| Uniprot ID | P0A1Z7 |
| ORF Length (Amino Acid) | 64 |
++ More..
| Conservation Analysis |
No. of Species: 131
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3597930 | 3598124 | - | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 2 | 4743468 | 4743662 | + | NC_013716.1 | Citrobacter rodentium ICC168 |
| 3 | 3824383 | 3824577 | + | NZ_CP038469.1 | Citrobacter tructae |
| 4 | 2825995 | 2826189 | + | NZ_CP044098.1 | Citrobacter portucalensis |
| 5 | 2256684 | 2256878 | - | NZ_CP033744.1 | Citrobacter freundii |
| 6 | 1448061 | 1448255 | - | NZ_CP053416.1 | Salmonella bongori |
| 7 | 402153 | 402347 | + | NZ_CP035129.1 | Kosakonia cowanii |
| 8 | 4182299 | 4182493 | - | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 9 | 2699234 | 2699428 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 10 | 4449295 | 4449489 | - | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 11 | 3555435 | 3555629 | + | NZ_CP045300.1 | Kosakonia arachidis |
| 12 | 370229 | 370423 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 13 | 3957851 | 3958045 | - | NZ_LR134340.1 | Escherichia marmotae |
| 14 | 2375952 | 2376146 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 15 | 3439045 | 3439239 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 16 | 4189802 | 4189996 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 17 | 4353030 | 4353224 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 18 | 1651276 | 1651470 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 19 | 31094 | 31288 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 20 | 4876269 | 4876463 | - | NZ_CP015113.1 | Kosakonia radicincitans |
| 21 | 3430669 | 3430863 | - | NZ_AP014857.1 | Escherichia albertii |
| 22 | 447773 | 447967 | + | NZ_CP014007.2 | Kosakonia oryzae |
| 23 | 420901 | 421095 | + | NZ_CP050508.1 | Raoultella terrigena |
| 24 | 2999762 | 2999956 | - | NZ_CP023529.1 | Lelliottia amnigena |
| 25 | 717468 | 717662 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 26 | 4291482 | 4291676 | - | NZ_CP027986.1 | Enterobacter sichuanensis |
| 27 | 373567 | 373761 | + | NZ_CP054058.1 | Scandinavium goeteborgense |
| 28 | 540592 | 540786 | + | NZ_CP036175.1 | Klebsiella huaxiensis |
| 29 | 389714 | 389908 | + | NZ_AP023184.1 | Buttiauxella agrestis |
| 30 | 975138 | 975332 | + | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 31 | 5136069 | 5136263 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 32 | 2112201 | 2112395 | + | NZ_CP042941.1 | Atlantibacter hermannii |
| 33 | 422556 | 422750 | + | NZ_LR134475.1 | Klebsiella aerogenes |
| 34 | 418742 | 418936 | + | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 35 | 3970368 | 3970562 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 36 | 455437 | 455631 | + | NZ_CP045845.1 | Kluyvera intermedia |
| 37 | 419337 | 419531 | + | NZ_CP041247.1 | Raoultella electrica |
| 38 | 4872296 | 4872490 | - | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 39 | 428279 | 428473 | + | NZ_CP054254.1 | Klebsiella variicola |
| 40 | 2031223 | 2031417 | - | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 41 | 4048401 | 4048595 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 42 | 307916 | 308110 | + | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 43 | 4298306 | 4298500 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 44 | 443562 | 443756 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 45 | 4312773 | 4312967 | - | NC_015968.1 | Enterobacter soli |
| 46 | 3001324 | 3001518 | + | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 47 | 4402321 | 4402515 | - | NZ_CP009756.1 | Enterobacter cloacae |
| 48 | 2860866 | 2861060 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 49 | 4634423 | 4634617 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 50 | 1258893 | 1259087 | - | NZ_CP026047.1 | Raoultella planticola |
| 51 | 457676 | 457870 | + | NZ_CP046672.1 | Raoultella ornithinolytica |
| 52 | 4205384 | 4205578 | - | NZ_AP022508.1 | Enterobacter bugandensis |
| 53 | 501442 | 501636 | + | NZ_CP060111.1 | Klebsiella michiganensis |
| 54 | 1176196 | 1176390 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 55 | 220728 | 220922 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 56 | 3893014 | 3893208 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 57 | 74710 | 74904 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 58 | 4060254 | 4060448 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 59 | 3793473 | 3793667 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 60 | 230092 | 230286 | + | NZ_CP023525.1 | Cedecea neteri |
| 61 | 3466797 | 3466991 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 62 | 234608 | 234802 | + | NZ_LR134201.1 | Cedecea lapagei |
| 63 | 4013813 | 4014007 | + | NZ_CP067057.1 | Rahnella aceris |
| 64 | 4222647 | 4222841 | + | NZ_CP028271.1 | Mixta intestinalis |
| 65 | 453174 | 453368 | + | NC_017554.1 | Pantoea ananatis PA13 |
| 66 | 4592253 | 4592447 | - | NC_014306.1 | Erwinia billingiae Eb661 |
| 67 | 462806 | 463000 | + | NZ_CP038853.1 | Pantoea vagans |
| 68 | 417707 | 417901 | + | NZ_LN907827.1 | Erwinia gerundensis |
| 69 | 3618706 | 3618900 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 70 | 452665 | 452859 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 71 | 1192184 | 1192378 | - | NZ_CP019706.1 | Pantoea alhagi |
| 72 | 483685 | 483879 | + | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 73 | 473676 | 473870 | + | NZ_CP026377.1 | Mixta gaviniae |
| 74 | 2452619 | 2452813 | - | NZ_CP049115.1 | Pantoea stewartii |
| 75 | 399055 | 399249 | + | NZ_CP061511.1 | Mixta calida |
| 76 | 2519736 | 2519930 | + | NZ_CP011078.1 | Yersinia ruckeri |
| 77 | 4370220 | 4370414 | - | NZ_CP043727.1 | Yersinia canariae |
| 78 | 3001788 | 3001982 | + | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 79 | 1562359 | 1562553 | + | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 80 | 330734 | 330928 | + | NZ_CP011118.1 | Yersinia enterocolitica |
| 81 | 4384307 | 4384501 | - | NZ_CP032487.1 | Yersinia hibernica |
| 82 | 270143 | 270337 | + | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 83 | 752554 | 752748 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 84 | 2595983 | 2596177 | - | NZ_CP009787.1 | Yersinia rohdei |
| 85 | 135162 | 135356 | + | NZ_CP046293.1 | Yersinia intermedia |
| 86 | 516658 | 516852 | + | NZ_CP065044.1 | Pectobacterium aroidearum |
| 87 | 306063 | 306257 | + | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 88 | 1269966 | 1270160 | - | NZ_CP007230.1 | Yersinia similis |
| 89 | 2133832 | 2134026 | + | NZ_CP047495.1 | Pectobacterium brasiliense |
| 90 | 475611 | 475805 | + | NZ_CP051652.1 | Pectobacterium carotovorum |
| 91 | 4398371 | 4398565 | - | NZ_CP034938.1 | Pectobacterium odoriferum |
| 92 | 4795450 | 4795644 | + | NZ_CP014137.1 | Brenneria goodwinii |
| 93 | 3211176 | 3211370 | - | NZ_CP017482.1 | Pectobacterium polaris |
| 94 | 4731877 | 4732071 | + | NZ_CP015749.1 | Pectobacterium parmentieri |
| 95 | 1139560 | 1139754 | - | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 96 | 4407835 | 4408029 | - | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 97 | 4237934 | 4238128 | - | NZ_CP038498.1 | Pectobacterium punjabense |
| 98 | 477300 | 477494 | + | NZ_CP006569.1 | Sodalis praecaptivus |
| 99 | 147346 | 147540 | + | NZ_CP034035.1 | Brenneria rubrifaciens |
| 100 | 449468 | 449662 | + | NC_012880.1 | Musicola paradisiaca Ech703 |
| 101 | 4429577 | 4429771 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 102 | 1687574 | 1687768 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 103 | 1649409 | 1649603 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 104 | 4392702 | 4392896 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 105 | 3313227 | 3313421 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 106 | 374794 | 374988 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 107 | 5499407 | 5499601 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 108 | 1320859 | 1321053 | - | NZ_CP011254.1 | Serratia fonticola |
| 109 | 101629 | 101823 | + | NZ_CP015581.1 | Tatumella citrea |
| 110 | 313626 | 313820 | + | NZ_CP065534.1 | Lonsdalea populi |
| 111 | 4048951 | 4049145 | - | NZ_LT615367.1 | Dickeya aquatica |
| 112 | 4261589 | 4261786 | - | NZ_CP050150.1 | Hafnia alvei |
| 113 | 471522 | 471716 | + | NZ_CP042220.2 | Dickeya poaceiphila |
| 114 | 4192792 | 4192986 | - | NZ_CP025799.1 | Dickeya zeae |
| 115 | 4879323 | 4879517 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 116 | 4942772 | 4942966 | - | NZ_LR134494.1 | Serratia quinivorans |
| 117 | 4198013 | 4198207 | - | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 118 | 3172614 | 3172808 | - | NZ_CP060401.1 | Xenorhabdus nematophila |
| 119 | 1121048 | 1121242 | - | NZ_CP065640.1 | Serratia rubidaea |
| 120 | 4898779 | 4898973 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 121 | 5014816 | 5015010 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 122 | 1380545 | 1380739 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 123 | 4812334 | 4812528 | - | NZ_LT906479.1 | Serratia ficaria |
| 124 | 334553 | 334747 | + | NZ_CP071320.1 | Serratia ureilytica |
| 125 | 4848038 | 4848232 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 126 | 4068139 | 4068333 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 127 | 4076136 | 4076330 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 128 | 3492062 | 3492256 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 129 | 4102569 | 4102769 | - | NZ_CP048796.1 | Providencia vermicola |
| 130 | 3166921 | 3167115 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 131 | 323276 | 323467 | + | NZ_CP040449.1 | Aeromonas simiae |
| 132 | 300894 | 301085 | + | NZ_CP040021.1 | Salinivibrio kushneri |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_003197.2
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00573.24 | 0.95 | 124 | 2363.0 | same-strand | Ribosomal protein L4/L1 family |
| 2 | PF00338.24 | 0.96 | 126 | 1380.0 | same-strand | Ribosomal protein S10p/S20e |
| 3 | PF00210.26 | 1.0 | 131 | 74.0 | same-strand | Ferritin-like domain |
| 4 | PF00009.29 | 0.98 | 129 | 1380.0 | same-strand | Elongation factor Tu GTP binding domain |
| 5 | PF03143.19 | 0.98 | 129 | 179.5 | same-strand | Elongation factor Tu C-terminal domain |
| 6 | PF03144.27 | 0.98 | 129 | 1380.0 | same-strand | Elongation factor Tu domain 2 |
| 7 | PF01926.25 | 0.98 | 128 | 179 | same-strand | 50S ribosome-binding GTPase |
| 8 | PF03764.20 | 0.91 | 119 | 1432.0 | same-strand | Elongation factor G, domain IV |
| 9 | PF14492.8 | 0.91 | 119 | 1432.0 | same-strand | Elongation Factor G, domain III |
| 10 | PF00679.26 | 0.91 | 119 | 1432.0 | same-strand | Elongation factor G C-terminus |
| 11 | PF00177.23 | 0.89 | 117 | 3642.0 | same-strand | Ribosomal protein S7p/S5e |
| 12 | PF00164.27 | 0.89 | 116 | 4208 | same-strand | Ribosomal protein S12/S23 |
| 13 | PF04077.14 | 0.87 | 114 | 4709.0 | same-strand | DsrH like protein |
++ More..