* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP013984.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF13085.8
|
0.91
|
10
|
4595.0
|
same-strand
|
2Fe-2S iron-sulfur cluster binding domain
|
2
|
PF13183.8
|
0.91
|
10
|
4595.0
|
same-strand
|
4Fe-4S dicluster domain
|
3
|
PF13237.8
|
0.91
|
10
|
4595.0
|
same-strand
|
4Fe-4S dicluster domain
|
4
|
PF13534.8
|
0.91
|
10
|
4595.0
|
same-strand
|
4Fe-4S dicluster domain
|
5
|
PF00890.26
|
1.0
|
11
|
2832
|
same-strand
|
FAD binding domain
|
6
|
PF02910.22
|
1.0
|
11
|
2832
|
same-strand
|
Fumarate reductase flavoprotein C-term
|
7
|
PF01127.24
|
1.0
|
11
|
2190
|
same-strand
|
Succinate dehydrogenase/Fumarate reductase transmembrane subunit
|
8
|
PF10702.11
|
1.0
|
11
|
1452
|
opposite-strand
|
Protein of unknown function (DUF2507)
|
9
|
PF00696.30
|
1.0
|
11
|
176
|
same-strand
|
Amino acid kinase family
|
10
|
PF13840.8
|
1.0
|
11
|
176
|
same-strand
|
ACT domain
|
11
|
PF08459.13
|
1.0
|
11
|
120
|
same-strand
|
UvrC RIbonuclease H-like domain
|
12
|
PF02151.21
|
1.0
|
11
|
120
|
same-strand
|
UvrB/uvrC motif
|
13
|
PF01541.26
|
1.0
|
11
|
120
|
same-strand
|
GIY-YIG catalytic domain
|
14
|
PF14520.8
|
0.91
|
10
|
120.0
|
same-strand
|
Helix-hairpin-helix domain
|
15
|
PF00085.22
|
1.0
|
11
|
2028
|
same-strand
|
Thioredoxin
|
16
|
PF13098.8
|
1.0
|
11
|
2028
|
same-strand
|
Thioredoxin-like domain
|
17
|
PF13192.8
|
1.0
|
11
|
2028
|
same-strand
|
Thioredoxin domain
|
18
|
PF00462.26
|
1.0
|
11
|
2028
|
same-strand
|
Glutaredoxin
|
19
|
PF06964.14
|
0.82
|
9
|
2665
|
same-strand
|
Alpha-L-arabinofuranosidase C-terminal domain
|
20
|
PF01012.23
|
1.0
|
11
|
4368.5
|
same-strand
|
Electron transfer flavoprotein domain
|
21
|
PF00766.21
|
1.0
|
11
|
4340
|
same-strand
|
Electron transfer flavoprotein FAD-binding domain
|
++ More..