ProsmORF-pred
Result : A4G1L5
Protein Information
Information Type Description
Protein name Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (Asp/Glu-ADT subunit C) (EC 6.3.5.-)
NCBI Accession ID CU207211.1
Organism Herminiimonas arsenicoxydans
Left 161665
Right 161967
Strand -
Nucleotide Sequence ATGTCCCTAGCACTTTCCGATGTCAAACGTTTATCAATGCTCGCGCAAATCGACCTGACCGATGCGCAATCCGCACAGACGCTGGATAAATTAAATGGCATCTTTGCACTGGTCGAACAATTGAGCGCCGTCGATACCACTGGTGTCGAACCGCTGAATCATCCCATTGCCGCCTTGCTGCCGGACCTGTCGCTGCGCCTGCGCGACGACGTCGTAAGCGAACCGAATCGCCGCGACGATTACCAGCAGGTTGCACCGGCAACGCAGGACGGCTTGTATCTGGTGCCCAAAGTCATCGAATAA
Sequence MSLALSDVKRLSMLAQIDLTDAQSAQTLDKLNGIFALVEQLSAVDTTGVEPLNHPIAALLPDLSLRLRDDVVSEPNRRDDYQQVAPATQDGLYLVPKVIE
Source of smORF Swiss-Prot
Function Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln). {ECO:0000255|HAMAP-Rule:MF_00122}.
Pubmed ID 17432936
Domain CDD:412411
Functional Category Others
Uniprot ID A4G1L5
ORF Length (Amino Acid) 100
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Conservation Analysis
Conservation Analysis
No. of Species: 195
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 2202950 2203252 + NZ_LT671418.1 Herminiimonas arsenitoxidans
2 5424926 5425228 - NZ_CP013737.1 Herbaspirillum rubrisubalbicans M1
3 5242013 5242315 + NZ_CP013232.1 Collimonas fungivorans
4 3799869 3800171 + NZ_CP018845.1 Herbaspirillum robiniae
5 5201853 5202155 + NZ_CP013236.1 Collimonas pratensis
6 5501358 5501660 - NZ_CP037993.1 Herbaspirillum huttiense
7 5346436 5346738 - NZ_CP011930.1 Herbaspirillum seropedicae
8 4308631 4308933 + NZ_CP013235.1 Collimonas arenae
9 1546706 1547008 + NZ_CP034464.1 Undibacterium parvum
10 5023820 5024122 + NZ_HG322949.1 Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628
11 1428447 1428746 - NZ_CP028324.1 Massilia armeniaca
12 4686107 4686406 - NZ_CP046904.1 Massilia flava
13 37198 37497 + NZ_CP054626.1 Cupriavidus gilardii
14 1932860 1933159 + NZ_CP011257.1 Ralstonia mannitolilytica
15 5941068 5941367 + NZ_CP036401.1 Massilia albidiflava
16 125886 126185 - NZ_CP039287.1 Cupriavidus necator H16
17 4854265 4854564 - NZ_CP019038.1 Massilia putida
18 1095815 1096117 - NZ_CP048832.1 Janthinobacterium lividum
19 75033 75332 - NZ_CP032519.1 Cupriavidus oxalaticus
20 5890565 5890864 - NZ_CP040017.1 Massilia umbonata
21 68664 68951 + NZ_CP029331.1 Thauera hydrothermalis
22 4955034 4955336 - NZ_CP041185.1 Janthinobacterium tructae
23 1082188 1082490 - NZ_CP023422.1 Janthinobacterium svalbardensis
24 457601 457900 - NZ_CP068285.1 Ralstonia syzygii subsp. celebesensis
25 3847775 3848074 + NZ_CP016022.1 Ralstonia insidiosa
26 197851 198150 + NZ_CP062803.1 Cupriavidus basilensis
27 857058 857360 - NZ_CP018787.1 Oxalobacter formigenes
28 1517332 1517634 - NZ_CP024608.1 Massilia violaceinigra
29 556844 557143 + NZ_CP017754.1 Cupriavidus malaysiensis
30 2159446 2159745 - NZ_CP012943.1 Ralstonia solanacearum
31 458775 459074 - NZ_CP027666.1 Ottowia oryzae
32 61712 62011 + NC_010622.1 Paraburkholderia phymatum STM815
33 53010 53309 + NZ_CP026111.1 Paraburkholderia terrae
34 1958486 1958773 - NZ_CP059467.1 Aromatoleum bremense
35 4697160 4697447 - NC_005085.1 Chromobacterium violaceum ATCC 12472
36 51945 52244 + NC_021287.1 Caballeronia insecticola
37 3110887 3111174 + NZ_CP025682.1 Azoarcus pumilus
38 292735 293034 - NZ_CP019236.1 Rhodoferax koreense
39 82093 82392 + NC_007951.1 Paraburkholderia xenovorans LB400
40 43890 44189 + NZ_CP029640.1 Paraburkholderia dokdonella
41 1084240 1084539 - NZ_CP022989.1 Paraburkholderia aromaticivorans
42 177992 178291 + NC_007651.1 Burkholderia thailandensis E264
43 3370403 3370690 + NZ_CP017707.1 Chromobacterium vaccinii
44 165213 165512 + NZ_CP024934.1 Paraburkholderia graminis
45 85402 85701 + NZ_CP024941.1 Paraburkholderia terricola
46 45952 46251 + NZ_CP049134.1 Paraburkholderia tropica
47 352950 353249 + NC_010681.1 Paraburkholderia phytofirmans PsJN
48 4382987 4383286 + NC_007908.1 Rhodoferax ferrireducens T118
49 2000788 2001087 - NZ_CP015958.1 Paraburkholderia caribensis
50 2017905 2018192 + NZ_CP029495.1 Chromobacterium phragmitis
51 1809764 1810051 - NC_006513.1 Aromatoleum aromaticum EbN1
52 2521752 2522051 - NZ_CP066075.1 Paraburkholderia ginsengisoli
53 2285354 2285653 + NZ_CP031467.1 Paraburkholderia caffeinilytica
54 183921 184220 - NC_008781.1 Polaromonas naphthalenivorans CJ2
55 46566 46865 + NZ_CP046913.1 Paraburkholderia acidisoli
56 54871 55170 + NZ_CP046909.1 Paraburkholderia acidiphila
57 2977456 2977743 + NZ_CP014646.1 Thauera humireducens
58 277974 278273 - NZ_CP019239.1 Rhodoferax saidenbachensis
59 317092 317391 + NZ_CP037867.1 Hydrogenophaga pseudoflava
60 2706074 2706373 - NC_014722.1 Mycetohabitans rhizoxinica HKI 454
61 3642070 3642369 - NZ_CP013459.1 Burkholderia stagnalis
62 3874821 3875120 - NZ_CP013414.1 Burkholderia ubonensis
63 3676669 3676968 - NZ_CP020737.1 Paraburkholderia acidophila
64 2767790 2768089 - NZ_CP017561.1 Paraburkholderia sprentiae WSM5005
65 3910374 3910661 + NZ_CP043473.1 Chromobacterium paludis
66 3414711 3415010 - NZ_CP009727.1 Burkholderia mallei
67 1570861 1571160 - NZ_CP008781.1 Burkholderia pseudomallei
68 5018377 5018664 + NZ_CP007039.1 Pseudomonas cichorii JBC1
69 36014 36313 - NZ_CP009832.1 Burkholderia multivorans ATCC BAA-247
70 4919799 4920086 + NZ_CP068034.2 Pseudomonas syringae
71 4987486 4987773 + NZ_CP042804.1 Pseudomonas amygdali pv. tabaci str. ATCC 11528
72 5037595 5037882 + NC_004578.1 Pseudomonas syringae pv. tomato str. DC3000
73 3901579 3901878 + NZ_CP054840.1 Acidovorax antarcticus
74 4107772 4108071 - NZ_CP002580.1 Burkholderia plantarii
75 3371212 3371511 + NZ_CP009795.1 Burkholderia dolosa AU0158
76 394087 394386 - NC_015138.1 Acidovorax avenae subsp. avenae ATCC 19860
77 355894 356193 - NZ_CP051298.1 Alicycliphilus denitrificans
78 561614 561913 - NZ_CP027792.1 Pulveribacter suum
79 2200484 2200783 - NZ_CP035900.1 Burkholderia glumae
80 518639 518926 + NZ_AP021881.1 Sulfuriferula nivalis
81 793318 793605 - NZ_CP064781.1 Azospira restricta
82 2595055 2595342 + NZ_CP059560.1 Aromatoleum petrolei
83 300854 301153 + NZ_CP017476.1 Hydrogenophaga crassostreae
84 1607752 1608051 - NZ_CP009555.1 Burkholderia oklahomensis C6786
85 325418 325717 - NC_008752.1 Acidovorax citrulli AAC00-1
86 5163712 5164011 - NZ_CP065748.1 Delftia lacustris
87 5138731 5139030 - NZ_CP017420.1 Delftia tsuruhatensis
88 3487689 3487988 - NZ_CP013401.1 Burkholderia metallica
89 4855866 4856153 + NZ_CP067022.1 Pseudomonas cannabina pv. alisalensis
90 3619607 3619906 - NZ_CP045235.1 Burkholderia cepacia
91 1204991 1205290 - NZ_CP011503.1 Burkholderia pyrrocinia
92 3521437 3521736 - NZ_CP013450.1 Burkholderia cenocepacia
93 245582 245881 - NZ_CP021359.1 Acidovorax carolinensis
94 1867310 1867609 + NZ_AP014569.1 Serpentinomonas mccroryi
95 4330425 4330724 - NZ_CP011568.3 Pandoraea thiooxydans
96 231019 231318 + NZ_CP043575.1 Comamonas koreensis
97 1796250 1796549 + NC_008786.1 Verminephrobacter eiseniae EF01-2
98 3626820 3627119 - NC_007510.1 Burkholderia lata
99 2978138 2978437 + NZ_CP060790.1 Acidovorax monticola
100 3439645 3439944 - NZ_CP013398.1 Burkholderia seminalis
101 268986 269273 + NZ_AP019312.1 Chromobacterium haemolyticum
102 815785 816084 + NZ_CP022423.1 Vitreoscilla filiformis
103 141183 141482 - NZ_CP051461.1 Polaromonas vacuolata
104 953886 954173 + NZ_CP041335.1 Chitinolyticbacter meiyuanensis
105 4772487 4772774 + NZ_CP046621.1 Pseudomonas alkylphenolica
106 227286 227585 + NZ_CP013480.3 Pandoraea norimbergensis
107 1597501 1597791 - NZ_LT906482.1 Eikenella corrodens
108 194420 194719 + NZ_CP011253.3 Pandoraea oxalativorans
109 223466 223765 + NZ_LT906435.1 Pandoraea sputorum
110 5297578 5297877 - NZ_CP013481.2 Pandoraea apista
111 1693798 1694097 + NZ_CP027669.1 Simplicispira suum
112 1190373 1190660 - NZ_CP071706.1 Pseudomonas donghuensis
113 2538410 2538709 + NZ_CP060783.1 Diaphorobacter aerolatus
114 2647072 2647359 + NZ_AP018721.1 Sulfuritortus calidifontis
115 3608901 3609188 + NZ_CP012676.1 Pseudomonas versuta
116 3961820 3962107 + NZ_CP062158.2 Pseudomonas lundensis
117 211099 211398 + NZ_CP011807.3 Pandoraea faecigallinarum
118 250181 250480 + NZ_CP010897.2 Pandoraea vervacti
119 2742706 2743005 + NZ_AP018150.1 Mycoavidus cysteinexigens
120 134032 134331 - NZ_CP064338.1 Schlegelella thermodepolymerans
121 2665119 2665406 - NC_012969.1 Methylovorus glucosetrophus SIP3-4
122 156802 157089 - NZ_CP028339.1 Thauera aromatica K172
123 553111 553398 + NZ_LR778301.1 Denitratisoma oestradiolicum
124 5028045 5028332 + NZ_CP049044.1 Pseudomonas psychrophila
125 204365 204664 + NC_023018.2 Pandoraea pnomenusa
126 151363 151650 - NZ_CP018839.1 Thauera chlorobenzoica
127 3661539 3661826 - NZ_AP022853.1 Sulfurimicrobium lacus
128 1882328 1882627 + NZ_AP014568.1 Serpentinomonas raichei
129 3264868 3265167 - NZ_CP035708.1 Sphaerotilus natans subsp. sulfidivorans
130 1505907 1506197 - NZ_CP059564.1 Alysiella filiformis
131 3946909 3947208 + NZ_CP040709.1 Inhella inkyongensis
132 2124180 2124467 + NZ_CP058952.1 Chitinibacter fontanus
133 4226127 4226426 + NZ_CP035503.1 Rhodoferax sediminis
134 240103 240402 + NZ_CP047385.1 Pandoraea fibrosis
135 3918748 3919035 + NZ_LR215729.2 Pseudomonas marincola
136 205899 206186 - NZ_CP016210.1 Azoarcus olearius
137 2668308 2668595 - NC_007947.1 Methylobacillus flagellatus KT
138 1102645 1102932 - NZ_CP022562.1 Pseudomonas monteilii
139 4956008 4956295 + NC_021505.1 Pseudomonas putida NBRC 14164
140 234821 235108 - NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H
141 1045545 1045832 - NZ_CP024159.1 Pseudomonas mosselii
142 5962898 5963185 + NZ_CP048833.1 Pseudomonas multiresinivorans
143 1563398 1563688 - NZ_CP059567.1 Neisseria shayeganii
144 128913 129200 - NZ_CP022579.1 Oryzomicrobium terrae
145 203498 203797 + NZ_CP010310.2 Pandoraea pulmonicola
146 810940 811227 - NZ_CP009533.1 Pseudomonas rhizosphaerae
147 4562141 4562428 - NZ_CP031146.1 Pseudomonas plecoglossicida
148 5444971 5445258 + NZ_CP056030.1 Pseudomonas eucalypticola
149 4232106 4232393 + NZ_CP060009.1 Pseudomonas sediminis
150 3335250 3335537 - NZ_CP070505.1 Pseudomonas toyotomiensis
151 4389584 4389868 - NZ_CP053069.1 Usitatibacter rugosus
152 4058098 4058385 + NZ_CP013124.1 Pseudomonas mendocina S5.2
153 950307 950594 - NZ_CP027723.1 Pseudomonas orientalis
154 5013671 5013961 + NC_002516.2 Pseudomonas aeruginosa PAO1
155 349908 350207 - NZ_CP021455.1 Comamonas serinivorans
156 990531 990818 - NZ_CP068551.1 Pseudomonas khazarica
157 954992 955279 - NZ_CP010896.1 Pseudomonas simiae
158 547854 548153 + NC_010524.1 Leptothrix cholodnii SP-6
159 1126361 1126648 - NC_008027.1 Pseudomonas entomophila L48
160 6190799 6191086 - NZ_CP009365.1 Pseudomonas soli
161 6042482 6042790 + NZ_CP043046.1 Pigmentiphaga aceris
162 1103758 1104045 - NZ_CP027756.1 Pseudomonas synxantha
163 1176502 1176789 - NZ_CP054205.1 Pseudomonas rhodesiae
164 1024513 1024800 - NZ_AP014862.1 Pseudomonas furukawaii
165 1038860 1039147 - NZ_CP018420.1 Pseudomonas veronii
166 978236 978523 - NZ_CP023272.1 Pseudomonas lurida
167 759453 759740 - NZ_CP012400.2 Pseudomonas yamanorum
168 1008664 1008951 - NZ_CP062252.1 Pseudomonas allokribbensis
169 3115314 3115613 - NZ_CP047650.1 Xylophilus rhododendri
170 4833616 4833903 + NZ_CP047698.1 Pseudomonas knackmussii
171 5101619 5101906 + NZ_CP070503.1 Pseudomonas atacamensis
172 469194 469481 - NZ_LR134378.1 Lautropia mirabilis
173 1238781 1239068 - NZ_CP014158.1 Pseudomonas citronellolis
174 2020867 2021166 - NZ_CP020046.1 Thiomonas intermedia
175 372655 372963 - NZ_CP043146.1 Bordetella holmesii
176 214182 214490 + NC_018518.1 Bordetella pertussis 18323
177 483804 484112 - NZ_LR134326.1 Bordetella bronchiseptica
178 2733683 2733997 - NZ_CP040105.1 Acinetobacter nosocomialis M2
179 2423770 2424084 + NC_016603.1 Acinetobacter pittii PHEA-2
180 2650298 2650612 - NZ_CP070518.1 Acinetobacter calcoaceticus
181 696134 696448 - NZ_CP053391.1 Acinetobacter lactucae
182 690070 690384 - NZ_CP015121.1 Acinetobacter baumannii
183 739569 739883 - NZ_CP065820.1 Acinetobacter seifertii
184 708116 708430 - NC_014259.1 Acinetobacter oleivorans DR1
185 463657 463965 - NC_010170.1 Bordetella petrii
186 2760498 2760812 + NZ_CP032134.1 Acinetobacter chinensis
187 2280135 2280449 + NZ_CP044483.1 Acinetobacter schindleri
188 3451781 3452089 + NC_010645.1 Bordetella avium 197N
189 3471550 3471864 + NZ_AP014630.1 Acinetobacter guillouiae
190 99992 100306 + NZ_CP012808.1 Acinetobacter equi
191 359334 359642 - NZ_CP016440.1 Bordetella pseudohinzii
192 1984388 1984696 - NZ_CP021395.1 Bordetella hinzii
193 3702291 3702599 + NZ_AP019378.1 Bordetella parapertussis
194 2691432 2691746 + NZ_CP049801.1 Acinetobacter shaoyimingii
195 106998 107258 - NZ_AP018558.1 Hydrogenophilus thermoluteolus
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_CP011257.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00905.24 0.75 146 3042.0 opposite-strand Penicillin binding protein transpeptidase domain
2 PF03717.17 0.75 146 3042.0 opposite-strand Penicillin-binding Protein dimerisation domain
3 PF04093.14 0.96 187 2474 opposite-strand rod shape-determining protein MreD
4 PF04085.16 1.0 195 1427 opposite-strand rod shape-determining protein MreC
5 PF06723.15 0.99 193 238 opposite-strand MreB/Mbl protein
6 PF01425.23 0.99 194 53.0 same-strand Amidase
7 PF02934.17 0.98 192 1563.5 same-strand GatB/GatE catalytic domain
8 PF02637.20 0.98 192 1563.5 same-strand GatB domain
9 PF14450.8 0.79 155 238 opposite-strand Cell division protein FtsA
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