Protein Information |
Information Type | Description |
---|---|
Protein name | Uncharacterized protein TP_0666 |
NCBI Accession ID | AE000520.1 |
Organism | Treponema pallidum (strain Nichols) |
Left | 727768 |
Right | 728061 |
Strand | - |
Nucleotide Sequence | GTGCAGAAGGGAAGTGGTGCTTCGAGTGTTATGACGCTGTATGAATATTATTTGATATTTCCTGATGGAGAATGTCGGGAGATATCAGGACCTCCCTGTGAGAGGAGTCTTCTTGACATGAATGGACATCCGTTGAGAGTTCCCCTGTCTTCGAATAGAGTGATCGCGTACCGCGTCGCGGGAAAGCGCACTGTTGCAGGTGGTCGGGGGGTAGTCGGCATATGGTACACGCTCGAGCAGCTTGACGCACTCGAGCTGCTCGAGTACGTCTCGGGGCCTCTTGGCCAGCGATGA |
Sequence | MQKGSGASSVMTLYEYYLIFPDGECREISGPPCERSLLDMNGHPLRVPLSSNRVIAYRVAGKRTVAGGRGVVGIWYTLEQLDALELLEYVSGPLGQR |
Source of smORF | Swiss-Prot |
Function | |
Pubmed ID | 9665876 |
Domain | |
Functional Category | Others |
Uniprot ID | O83672 |
ORF Length (Amino Acid) | 97 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 722638 | 722931 | - | NC_015714.1 | Treponema paraluiscuniculi Cuniculi A |
2 | 1453253 | 1453492 | - | NC_002967.9 | Treponema denticola ATCC 35405 |
3 | 2600921 | 2601163 | + | NC_022097.1 | Treponema pedis str. T A4 |
4 | 2025437 | 2025676 | - | NZ_CP009228.1 | Treponema putidum |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF04620.14 | 1.0 | 4 | 1152.0 | opposite-strand | Flagellar filament outer layer protein Flaa |
2 | PF10719.11 | 0.75 | 3 | 3785 | same-strand | Late competence development protein ComFB |