Result : O68038
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Probable K(+)/H(+) antiporter subunit F (pH adaptation potassium efflux system protein F) (Pha system subunit F) |
| NCBI Accession ID | AF010496.1 |
| Organism | Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) |
| Left | 23575 |
| Right | 23853 |
| Strand | + |
| Nucleotide Sequence | ATGACCCCCCTGCTTGCATTTGCGCTGACCTATGCCCAATTCGCCCTGGCGCTGGCGGCCTGTCTGGCGGCGCTGCGGATCCTGCTGGGGCCGCGGGCGCAGGATCGGGTTCTGGCGCTCGAGGCGCTTTATGTCGCGACGATGCTGCTTTTCATCGTGACCGGGATGCGGATGGGCACGCCCTTCCTGTTCGAGGCGGCGCTGGTGATCGCGGTGGCGGGCTTTGTCAGCACCGTCTCGGCGGCGAAATTCCTGCTGCGCGGCGAGGTGATCGAATGA |
| Sequence | MTPLLAFALTYAQFALALAACLAALRILLGPRAQDRVLALEALYVATMLLFIVTGMRMGTPFLFEAALVIAVAGFVSTVSAAKFLLRGEVIE |
| Source of smORF | Swiss-Prot |
| Function | Part of a K(+) efflux system involved in pH adaptation. {ECO:0000250}. |
| Pubmed ID | 9256491 20418398 |
| Domain | CDD:415596 |
| Functional Category | Others |
| Uniprot ID | O68038 |
| ORF Length (Amino Acid) | 92 |
++ More..
| Conservation Analysis |
No. of Species: 144
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1783740 | 1784018 | - | NZ_CP061202.1 | Rhodobacter capsulatus |
| 2 | 2267785 | 2268021 | + | NZ_CP020470.1 | Rhodobacter blasticus |
| 3 | 755853 | 756089 | + | NZ_CP019937.1 | Ketogulonicigenium robustum |
| 4 | 1774204 | 1774485 | + | NZ_LN832559.1 | Paracoccus aminovorans |
| 5 | 1557700 | 1557966 | + | NC_022041.1 | Paracoccus aminophilus JCM 7686 |
| 6 | 2990650 | 2990883 | - | NZ_CP024422.1 | Paracoccus yeei |
| 7 | 3345821 | 3346054 | + | NZ_CP030239.1 | Paracoccus mutanolyticus |
| 8 | 941222 | 941458 | + | NZ_CP012908.1 | Ketogulonicigenium vulgare |
| 9 | 149835 | 150065 | + | NZ_CP035510.1 | Haematobacter massiliensis |
| 10 | 1120739 | 1121017 | - | NC_007964.1 | Nitrobacter hamburgensis X14 |
| 11 | 1124008 | 1124289 | - | NZ_CP045072.1 | Paracoccus kondratievae |
| 12 | 2890439 | 2890717 | + | NC_007406.1 | Nitrobacter winogradskyi Nb-255 |
| 13 | 643073 | 643354 | + | NC_015677.1 | Ramlibacter tataouinensis TTB310 |
| 14 | 1799667 | 1799948 | + | NC_008344.1 | Nitrosomonas eutropha C91 |
| 15 | 148752 | 148988 | - | NZ_CP061003.1 | Agrobacterium tumefaciens |
| 16 | 2130277 | 2130504 | + | NZ_CP032509.1 | Georhizobium profundi |
| 17 | 2676755 | 2676982 | + | NC_022997.1 | Hyphomicrobium nitrativorans NL23 |
| 18 | 147396 | 147632 | - | NZ_CP053856.1 | Rhizobium pusense |
| 19 | 1632847 | 1633083 | + | NZ_CP048632.1 | Rhizobium oryzihabitans |
| 20 | 290080 | 290307 | - | NZ_CP020540.1 | Sphingobium herbicidovorans |
| 21 | 2059245 | 2059526 | + | NC_004757.1 | Nitrosomonas europaea ATCC 19718 |
| 22 | 4467731 | 4468009 | - | NZ_CP036401.1 | Massilia albidiflava |
| 23 | 2957648 | 2957926 | + | NC_015684.1 | Afipia carboxidovorans OM5 |
| 24 | 208861 | 209109 | + | NZ_CP049249.1 | Rhizobium rhizoryzae |
| 25 | 526512 | 526748 | - | NZ_CP048630.1 | Ancylobacter pratisalsi |
| 26 | 4552236 | 4552484 | - | NZ_AP019700.1 | Stella humosa |
| 27 | 7256278 | 7256556 | + | NZ_CP040017.1 | Massilia umbonata |
| 28 | 2356288 | 2356569 | - | NC_018518.1 | Bordetella pertussis 18323 |
| 29 | 2626146 | 2626427 | - | NZ_AP019378.1 | Bordetella parapertussis |
| 30 | 2859386 | 2859667 | - | NZ_LR134326.1 | Bordetella bronchiseptica |
| 31 | 5114114 | 5114344 | - | NZ_CP039546.1 | Methylorubrum populi |
| 32 | 2795550 | 2795819 | - | NZ_CP022048.2 | Brevundimonas vesicularis |
| 33 | 144326 | 144556 | - | NZ_CP012405.1 | Azospirillum thiophilum |
| 34 | 2526434 | 2526673 | + | NC_014217.1 | Starkeya novella DSM 506 |
| 35 | 1820078 | 1820359 | - | NC_007614.1 | Nitrosospira multiformis ATCC 25196 |
| 36 | 4425663 | 4425899 | - | NZ_CP054021.1 | Rhizobium indicum |
| 37 | 514936 | 515205 | - | NZ_LS398110.1 | Bradyrhizobium vignae |
| 38 | 3762513 | 3762791 | + | NZ_CP054205.1 | Pseudomonas rhodesiae |
| 39 | 3081959 | 3082228 | + | NZ_CP058907.1 | Rhodopseudomonas palustris |
| 40 | 4417159 | 4417389 | + | NZ_CP059560.1 | Aromatoleum petrolei |
| 41 | 2364607 | 2364888 | - | NZ_CP021106.3 | Nitrosospira lacus |
| 42 | 2923433 | 2923711 | - | NZ_LT671418.1 | Herminiimonas arsenitoxidans |
| 43 | 30298 | 30531 | + | NZ_CP029355.1 | Azospirillum thermophilum |
| 44 | 2300503 | 2300739 | + | NZ_CP042304.1 | Devosia ginsengisoli |
| 45 | 1608939 | 1609217 | - | NC_008781.1 | Polaromonas naphthalenivorans CJ2 |
| 46 | 2521993 | 2522226 | + | NZ_CP014646.1 | Thauera humireducens |
| 47 | 3716418 | 3716696 | - | NZ_CP004387.1 | Alcanivorax pacificus W11-5 |
| 48 | 4266013 | 4266291 | + | NZ_CP024645.1 | Rhizobacter gummiphilus |
| 49 | 53175 | 53444 | + | NZ_CP029425.1 | Bradyrhizobium ottawaense |
| 50 | 41314 | 41541 | + | NC_008783.1 | Bartonella bacilliformis KC583 |
| 51 | 200039 | 200314 | - | NZ_LR134529.1 | Bartonella vinsonii |
| 52 | 2418752 | 2418982 | + | NC_011144.1 | Phenylobacterium zucineum HLK1 |
| 53 | 2380863 | 2381141 | - | NZ_CP014870.1 | Pseudomonas silesiensis |
| 54 | 879961 | 880242 | + | NZ_LR723670.1 | Pseudorhizobium flavum |
| 55 | 3116029 | 3116310 | + | NZ_CP012371.1 | Nitrosospira briensis C-128 |
| 56 | 195565 | 195804 | - | NZ_CP068983.1 | Paradevosia shaoguanensis |
| 57 | 1460939 | 1461220 | + | NZ_CP060790.1 | Acidovorax monticola |
| 58 | 2026698 | 2026976 | - | NZ_CP027666.1 | Ottowia oryzae |
| 59 | 3707374 | 3707652 | + | NZ_CP029608.1 | Pseudomonas kribbensis |
| 60 | 3933547 | 3933825 | + | NZ_CP062252.1 | Pseudomonas allokribbensis |
| 61 | 1324471 | 1324737 | + | NZ_CP034179.1 | Caenibius tardaugens NBRC 16725 |
| 62 | 3365161 | 3365397 | + | NZ_CP029451.1 | Sinorhizobium fredii CCBAU 25509 |
| 63 | 2981994 | 2982272 | + | NZ_CP009365.1 | Pseudomonas soli |
| 64 | 3579582 | 3579860 | + | NZ_CP027723.1 | Pseudomonas orientalis |
| 65 | 3739875 | 3740153 | + | NZ_CP023272.1 | Pseudomonas lurida |
| 66 | 797824 | 798054 | + | NC_020062.1 | Rhizobium tropici CIAT 899 |
| 67 | 5355607 | 5355885 | - | NZ_CP031146.1 | Pseudomonas plecoglossicida |
| 68 | 5869329 | 5869610 | + | NZ_LR134302.1 | Achromobacter spanius |
| 69 | 260700 | 260927 | - | NZ_CP029832.1 | Azospirillum ramasamyi |
| 70 | 3894247 | 3894525 | + | NZ_CP062253.1 | Pseudomonas gozinkensis |
| 71 | 3089055 | 3089336 | + | NZ_CP038034.1 | Achromobacter insolitus |
| 72 | 2913537 | 2913818 | - | NZ_LR588407.1 | Brevundimonas vancanneytii |
| 73 | 2108787 | 2109065 | - | NZ_CP012400.2 | Pseudomonas yamanorum |
| 74 | 4372397 | 4372675 | + | NZ_CP018420.1 | Pseudomonas veronii |
| 75 | 2397968 | 2398246 | + | NZ_CP014205.2 | Pseudomonas glycinae |
| 76 | 3101649 | 3101930 | - | NZ_LT907988.1 | Orrella dioscoreae |
| 77 | 2186696 | 2186932 | + | NZ_CP027792.1 | Pulveribacter suum |
| 78 | 55711 | 55941 | - | NZ_CP018839.1 | Thauera chlorobenzoica |
| 79 | 1667201 | 1667449 | - | NZ_AP019755.1 | Nitrosomonas stercoris |
| 80 | 2416457 | 2416738 | - | NZ_CP016440.1 | Bordetella pseudohinzii |
| 81 | 4310856 | 4311137 | - | NZ_CP021395.1 | Bordetella hinzii |
| 82 | 3642139 | 3642375 | + | NC_008752.1 | Acidovorax citrulli AAC00-1 |
| 83 | 2805113 | 2805391 | - | NZ_CP043575.1 | Comamonas koreensis |
| 84 | 88893 | 89123 | + | NZ_CP028339.1 | Thauera aromatica K172 |
| 85 | 2073042 | 2073320 | - | NZ_CP071706.1 | Pseudomonas donghuensis |
| 86 | 1163128 | 1163406 | + | NZ_CP014262.1 | Pseudomonas corrugata |
| 87 | 1738676 | 1738906 | - | NZ_CP021359.1 | Acidovorax carolinensis |
| 88 | 3148792 | 3149028 | + | NC_020528.1 | Sinorhizobium meliloti 2011 |
| 89 | 892223 | 892465 | + | NZ_CP060783.1 | Diaphorobacter aerolatus |
| 90 | 515379 | 515657 | + | NZ_CP027669.1 | Simplicispira suum |
| 91 | 3905077 | 3905355 | + | NZ_CP046621.1 | Pseudomonas alkylphenolica |
| 92 | 2892123 | 2892365 | + | NZ_CP060714.1 | Diaphorobacter ruginosibacter |
| 93 | 4683983 | 4684261 | + | NZ_CP019236.1 | Rhodoferax koreense |
| 94 | 4093953 | 4094231 | + | NC_021505.1 | Pseudomonas putida NBRC 14164 |
| 95 | 620472 | 620750 | - | NZ_CP009533.1 | Pseudomonas rhizosphaerae |
| 96 | 2293583 | 2293861 | - | NZ_CP062158.2 | Pseudomonas lundensis |
| 97 | 2862199 | 2862477 | - | NZ_CP049044.1 | Pseudomonas psychrophila |
| 98 | 120669 | 120950 | + | NZ_CP049243.1 | Rhizobium pseudoryzae |
| 99 | 3960928 | 3961206 | + | NZ_CP027756.1 | Pseudomonas synxantha |
| 100 | 1561934 | 1562176 | + | NZ_CP016278.1 | Diaphorobacter polyhydroxybutyrativorans |
| 101 | 2052749 | 2053027 | - | NZ_CP022562.1 | Pseudomonas monteilii |
| 102 | 1411047 | 1411325 | + | NZ_CP048810.1 | Pseudomonas bijieensis |
| 103 | 2227572 | 2227850 | + | NZ_CP012676.1 | Pseudomonas versuta |
| 104 | 3879377 | 3879655 | + | NZ_CP068034.2 | Pseudomonas syringae |
| 105 | 3784297 | 3784575 | + | NZ_CP042804.1 | Pseudomonas amygdali pv. tabaci str. ATCC 11528 |
| 106 | 873666 | 873944 | + | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 107 | 1922652 | 1922930 | - | NZ_CP024159.1 | Pseudomonas mosselii |
| 108 | 3812788 | 3813066 | + | NC_008027.1 | Pseudomonas entomophila L48 |
| 109 | 4230242 | 4230502 | + | NZ_CP023449.1 | Rhizorhabdus dicambivorans |
| 110 | 1981950 | 1982228 | - | NZ_CP007039.1 | Pseudomonas cichorii JBC1 |
| 111 | 226189 | 226470 | + | NC_020541.1 | Rhodanobacter denitrificans |
| 112 | 1657838 | 1658101 | + | NZ_CP043146.1 | Bordetella holmesii |
| 113 | 2881449 | 2881685 | + | NZ_CP034909.1 | Ensifer alkalisoli |
| 114 | 3973545 | 3973823 | + | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 115 | 855798 | 856031 | - | NZ_CP072133.1 | Pseudoalteromonas xiamenensis |
| 116 | 229707 | 229979 | - | NZ_CP009293.1 | Novosphingobium pentaromativorans US6-1 |
| 117 | 1411970 | 1412248 | - | NZ_CP021455.1 | Comamonas serinivorans |
| 118 | 3579516 | 3579752 | + | NZ_AP017655.1 | Sphingobium cloacae |
| 119 | 1584551 | 1584829 | - | NZ_CP054840.1 | Acidovorax antarcticus |
| 120 | 1683040 | 1683270 | - | NZ_CP051298.1 | Alicycliphilus denitrificans |
| 121 | 1754577 | 1754858 | - | NZ_CP053986.1 | Achromobacter denitrificans |
| 122 | 3694460 | 3694738 | + | NZ_CP010896.1 | Pseudomonas simiae |
| 123 | 2551798 | 2552076 | - | NZ_CP070503.1 | Pseudomonas atacamensis |
| 124 | 2686570 | 2686848 | - | NZ_CP035088.1 | Pseudomonas viciae |
| 125 | 105169 | 105402 | - | NZ_CP035033.1 | Hydrogenovibrio thermophilus |
| 126 | 2706519 | 2706797 | - | NZ_CP061079.1 | Pseudomonas chlororaphis |
| 127 | 2180940 | 2181176 | - | NC_015138.1 | Acidovorax avenae subsp. avenae ATCC 19860 |
| 128 | 2930092 | 2930370 | - | NZ_LS999205.1 | Pseudomonas protegens CHA0 |
| 129 | 103015 | 103296 | + | NZ_CP022749.1 | Sphingobium xenophagum |
| 130 | 19836 | 20117 | + | NZ_CP022747.1 | Sphingobium xenophagum |
| 131 | 412020 | 412256 | + | NZ_CP022603.1 | [Ochrobactrum] quorumnocens |
| 132 | 4293258 | 4293536 | - | NC_008786.1 | Verminephrobacter eiseniae EF01-2 |
| 133 | 3703908 | 3704186 | + | NZ_CP056030.1 | Pseudomonas eucalypticola |
| 134 | 1762197 | 1762424 | - | NZ_CP051461.1 | Polaromonas vacuolata |
| 135 | 1372601 | 1372837 | - | NZ_CP020931.1 | Marinobacter salarius |
| 136 | 3237219 | 3237455 | + | NZ_CP043042.1 | Marinobacter fonticola |
| 137 | 730024 | 730260 | - | NC_007624.1 | Brucella abortus 2308 |
| 138 | 787676 | 787912 | - | NC_022906.1 | Brucella ceti TE10759-12 |
| 139 | 458274 | 458510 | + | NC_009504.1 | Brucella ovis ATCC 25840 |
| 140 | 804023 | 804259 | - | NC_003318.1 | Brucella melitensis bv. 1 str. 16M |
| 141 | 484711 | 484947 | + | NC_010104.1 | Brucella canis ATCC 23365 |
| 142 | 484762 | 484998 | + | NC_004311.2 | Brucella suis 1330 |
| 143 | 486165 | 486401 | + | NC_013118.1 | Brucella microti CCM 4915 |
| 144 | 557836 | 558072 | - | NZ_LT605586.1 | Brucella inopinata |
| 145 | 614823 | 615059 | + | NZ_CP064062.1 | Brucella anthropi |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP061202.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF03334.16 | 0.99 | 143 | -3.0 | same-strand | Na+/H+ antiporter subunit |
| 2 | PF01899.18 | 0.99 | 142 | 0 | same-strand | Na+/H+ ion antiporter subunit |
| 3 | PF00361.22 | 0.99 | 143 | 2439 | same-strand | Proton-conducting membrane transporter |
| 4 | PF00420.26 | 1.0 | 144 | 2158 | same-strand | NADH-ubiquinone/plastoquinone oxidoreductase chain 4L |
| 5 | PF04039.15 | 0.99 | 143 | 2505 | same-strand | Domain related to MnhB subunit of Na+/H+ antiporter |
| 6 | PF13244.8 | 0.99 | 143 | 2505 | same-strand | Domain of unknown function (DUF4040) |
| 7 | PF00662.22 | 0.97 | 140 | 2503.5 | same-strand | NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus |
++ More..