Result : A3M2N7
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Darcynin 1 |
| NCBI Accession ID | CP000521.1 |
| Organism | Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) |
| Left | 874446 |
| Right | 874718 |
| Strand | - |
| Nucleotide Sequence | TTGGCTTTAGCTCGTGAAAAGCGGGCTGAGTTTAGTGCACAAAAGCTTGAACCTATTTTTGAGAAGTACCCGAGTGTAAAAGTTCGATGGTATGACGTTGAAGCGTTTAGCACTAAAGCCAGTGATATTGCTGTGTTTGAGACGACATCTTTGCAAGATTATTATTTTGTGATTGATGCGATTCGAGACTCTGAGTTTTGTACAGTACCCTACTTTGAGTTTGTAGAGATTATTCCTGCAATTGAAGATGGGTATGTGGAGTATGAAAGTTGA |
| Sequence | MALAREKRAEFSAQKLEPIFEKYPSVKVRWYDVEAFSTKASDIAVFETTSLQDYYFVIDAIRDSEFCTVPYFEFVEIIPAIEDGYVEYES |
| Source of smORF | Swiss-Prot |
| Function | |
| Pubmed ID | 17344419 |
| Domain | |
| Functional Category | Others |
| Uniprot ID | A3M2N7 |
| ORF Length (Amino Acid) | 90 |
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| Conservation Analysis |
No. of Species: 9
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3342725 | 3343003 | + | NZ_CP065820.1 | Acinetobacter seifertii |
| 2 | 3221683 | 3221961 | + | NZ_CP015121.1 | Acinetobacter baumannii |
| 3 | 1190128 | 1190406 | + | NZ_CP070518.1 | Acinetobacter calcoaceticus |
| 4 | 1311845 | 1312123 | + | NZ_CP040105.1 | Acinetobacter nosocomialis M2 |
| 5 | 3409229 | 3409498 | + | NC_014259.1 | Acinetobacter oleivorans DR1 |
| 6 | 4671940 | 4672221 | + | NZ_AP019312.1 | Chromobacterium haemolyticum |
| 7 | 3420490 | 3420795 | - | NZ_CP017707.1 | Chromobacterium vaccinii |
| 8 | 3948814 | 3949137 | - | NZ_CP043473.1 | Chromobacterium paludis |
| 9 | 2068089 | 2068412 | - | NZ_CP029495.1 | Chromobacterium phragmitis |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP065820.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00440.25 | 1.0 | 9 | 173.5 | opposite-strand | Bacterial regulatory proteins, tetR family |
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