ProsmORF-pred
Result : O66982
Protein Information
Information Type Description
Protein name 50S ribosomal protein L35
NCBI Accession ID AE000657.1
Organism Aquifex aeolicus (strain VF5)
Left 547720
Right 547923
Strand +
Nucleotide Sequence ATGGCAAAGGTTAAGATGAAGACTAACCGCTCAGCTGCGAAGAGGTTTAAGGTGACCGCTAAGGGTAAGATAAAGAGGTGGAAGTCCGGCGGTGCCCACTACAACACAAAGAAGTCCTCAAAAAGGAAGAGACACCTAAGAAAGCACACCTACGTTAAGGACAACATGCTCAAGCACGTCAAGGCACTCCTGAAGGAGTTTTAA
Sequence MAKVKMKTNRSAAKRFKVTAKGKIKRWKSGGAHYNTKKSSKRKRHLRKHTYVKDNMLKHVKALLKEF
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl00392. Profile Description: Ribosomal protein L35. This ribosomal protein is found in bacteria and organelles only. It is not closely related to any eukaryotic or archaeal ribosomal protein. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Pubmed ID 9537320
Domain CDD:412354
Functional Category Ribosomal_protein
Uniprot ID O66982
ORF Length (Amino Acid) 67
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 476
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 547720 547923 + NC_000918.1 Aquifex aeolicus VF5
2 450741 450944 - NC_013894.1 Thermocrinis albus DSM 14484
3 1145043 1145246 + NZ_CP007028.1 Thermocrinis ruber
4 70204 70410 - NC_012440.1 Persephonella marina EX-H1
5 1104795 1104995 - NC_017161.1 Hydrogenobacter thermophilus TK-6
6 423371 423574 - NC_012438.1 Sulfurihydrogenibium azorense Az-Fu1
7 1643463 1643666 - NC_003869.1 Caldanaerobacter subterraneus subsp. tengcongensis MB4
8 297065 297256 + NZ_AP013035.1 Thermosulfidibacter takaii ABI70S6
9 644299 644487 + NC_015520.1 Mahella australiensis 50-1 BON
10 1128542 1128748 - NZ_CP008796.1 Thermodesulfobacterium commune DSM 2178
11 1796864 1797052 + NZ_CP043998.1 Clostridium diolis
12 1522161 1522349 + NZ_CP040463.1 Caminibacter mediatlanticus TB-2
13 381375 381560 - NZ_CP027432.2 Caminibacter pacificus
14 3167593 3167778 - NZ_CP018099.1 Caldithrix abyssi DSM 13497
15 1156346 1156543 + NC_014926.1 Thermovibrio ammonificans HB-1
16 10114624 10114812 - NC_010162.1 Sorangium cellulosum So ce56
17 1492497 1492685 - NZ_CP021255.1 Desulfobulbus oralis
18 9464727 9464915 + NZ_CP016211.1 Minicystis rosea
19 371264 371449 - NC_012115.1 Nautilia profundicola AmH
20 3190382 3190585 - NC_015275.1 Cellulosilyticum lentocellum DSM 5427
21 3793895 3794083 - NZ_CP015756.1 Clostridium estertheticum subsp. estertheticum
22 775796 775993 - NZ_CP070062.1 Coprococcus comes
23 640598 640795 + NZ_AP023367.1 Anaerocolumna cellulosilytica
24 1624435 1624623 + NC_014972.1 Desulfobulbus propionicus DSM 2032
25 3924771 3924959 - NZ_CP011803.1 Clostridium carboxidivorans P7
26 4748937 4749125 - NZ_CP020953.1 Clostridium drakei
27 5157326 5157514 + NZ_CP009933.1 Clostridium scatologenes
28 1591668 1591856 - NC_006138.1 Desulfotalea psychrophila LSv54
29 1617613 1617801 - NZ_CP029256.1 Christensenella minuta
30 868515 868703 + NZ_CP032416.1 Clostridium fermenticellae
31 1069482 1069706 + NZ_LR699114.1 Aquicella lusitana
32 2278397 2278594 - NZ_LN879430.1 Herbinix luporum
33 109651 109851 - NZ_CP067016.1 Anaerococcus obesiensis
34 1387935 1388135 - NZ_CP066014.1 Anaerococcus vaginalis
35 570973 571170 + NC_010001.1 Lachnoclostridium phytofermentans ISDg
36 1615169 1615357 + NZ_CP040924.1 Clostridium thermarum
37 3718874 3719062 + NC_020304.1 Desulfocapsa sulfexigens DSM 10523
38 3308058 3308246 - NZ_CP028842.1 Clostridium botulinum
39 3551061 3551249 - NZ_CP011663.1 Clostridium sporogenes
40 74509 74694 - NC_018178.1 Melioribacter roseus P3M-2
41 859202 859390 + NZ_CP014170.1 Clostridium tyrobutyricum
42 2398507 2398695 + NC_014393.1 Clostridium cellulovorans 743B
43 937213 937410 + NC_014365.1 Desulfarculus baarsii DSM 2075
44 3168799 3168987 + NZ_CP023671.1 Clostridium septicum
45 1791642 1791830 + NZ_CP013019.1 Clostridium pasteurianum
46 1649362 1649550 - NZ_CP027286.1 Clostridium chauvoei
47 1272365 1272529 - NC_002971.4 Coxiella burnetii RSA 493
48 1722521 1722703 + NC_009633.1 Alkaliphilus metalliredigens QYMF
49 1782707 1782907 - NZ_AP022873.1 Dissulfurispira thermophila
50 893003 893191 + NZ_AP021888.1 Thiosulfativibrio zosterae
51 800587 800775 + NZ_CP016786.1 Clostridium isatidis
52 1437079 1437267 - NZ_CP016786.1 Clostridium isatidis
53 964860 965045 + NC_018664.1 Gottschalkia acidurici 9a
54 701697 701903 - NC_013501.1 Rhodothermus marinus DSM 4252
55 1369950 1370147 - NC_014377.1 Thermosediminibacter oceani DSM 16646
56 1688889 1689077 + NZ_CP010311.1 Geoalkalibacter subterraneus
57 2345227 2345424 + NC_011768.1 Desulfatibacillum aliphaticivorans
58 534288 534476 + NZ_CP017561.1 Paraburkholderia sprentiae WSM5005
59 2411716 2411916 - NZ_CP048649.1 Aminipila butyrica
60 1895967 1896152 - NC_010718.1 Natranaerobius thermophilus JW/NM-WN-LF
61 1738299 1738499 + NC_019780.1 Dactylococcopsis salina PCC 8305
62 1801998 1802195 + NZ_CP048000.1 Anaerocolumna sedimenticola
63 250290 250487 + NZ_CP027002.1 [Ruminococcus] gnavus ATCC 29149
64 5655829 5656029 - NZ_LR590484.1 Sphingobacterium thalpophilum
65 3199059 3199229 - NC_011837.1 Clostridium kluyveri NBRC 12016
66 1631211 1631408 - NZ_LT635479.1 Lachnoclostridium phocaeense
67 1201718 1201906 + NZ_CP049134.1 Paraburkholderia tropica
68 44304 44492 - NZ_CP020046.1 Thiomonas intermedia
69 1716769 1716966 - NZ_CP011367.1 Thioalkalivibrio versutus
70 728029 728226 + NC_015519.1 Tepidanaerobacter acetatoxydans Re1
71 1921318 1921506 - NZ_LT906477.1 Clostridium cochlearium
72 1883571 1883759 + NZ_CP045504.1 Desulfovibrio sulfodismutans DSM 3696
73 1319518 1319709 + NZ_CP010820.1 Lysinibacillus fusiformis
74 1440403 1440591 - NZ_CP012395.1 Clostridium autoethanogenum DSM 10061
75 3767216 3767404 - NC_014328.1 Clostridium ljungdahlii DSM 13528
76 1891385 1891573 - NZ_CP035033.1 Hydrogenovibrio thermophilus
77 3399793 3399981 - NC_007951.1 Paraburkholderia xenovorans LB400
78 2790113 2790301 - NZ_CP024941.1 Paraburkholderia terricola
79 214603 214791 + NZ_CP066075.1 Paraburkholderia ginsengisoli
80 1522857 1523045 - NZ_CP009170.1 Thermoanaerobacter kivui
81 871988 872176 + NC_016629.1 Desulfocurvibacter africanus subsp. africanus str. Walvis Bay
82 1668787 1668984 + NC_007498.2 Syntrophotalea carbinolica DSM 2380
83 2321628 2321816 - NZ_LR027880.1 Roseburia intestinalis L1-82
84 2311684 2311872 - NZ_HG917868.1 Clostridium bornimense
85 3211173 3211370 - NZ_CP036170.1 [Clostridium] scindens ATCC 35704
86 1610237 1610425 + NZ_CP014176.1 Clostridium argentinense
87 2388455 2388643 - NC_008261.1 Clostridium perfringens ATCC 13124
88 1506054 1506251 - NZ_AP014879.1 Sulfuricaulis limicola
89 798694 798882 - NZ_CP017269.1 Geosporobacter ferrireducens
90 1580280 1580477 + NZ_CP017415.1 Acidihalobacter yilgarnenesis
91 1600073 1600261 + NC_007510.1 Burkholderia lata
92 3431004 3431195 - NZ_CP006837.1 Lysinibacillus varians
93 1310448 1310639 + NZ_CP019980.1 Lysinibacillus sphaericus
94 1606792 1606980 + NZ_CP013398.1 Burkholderia seminalis
95 1599111 1599299 + NZ_CP045235.1 Burkholderia cepacia
96 861027 861215 - NZ_CP031467.1 Paraburkholderia caffeinilytica
97 243398 243586 + NZ_CP035900.1 Burkholderia glumae
98 1461720 1461908 - NZ_AP023212.1 Hydrogenimonas urashimensis
99 1835672 1835860 + NZ_CP002580.1 Burkholderia plantarii
100 1073784 1073972 + NC_015436.1 Sphaerochaeta coccoides DSM 17374
101 2295878 2296063 + NZ_AP017372.2 Halorhodospira halochloris
102 2385902 2386090 + NZ_CP059066.1 Koleobacter methoxysyntrophicus
103 2927697 2927885 + NZ_CP071376.1 Clostridium gasigenes
104 3049662 3049850 + NZ_CP071376.1 Clostridium gasigenes
105 1560150 1560338 + NC_017583.1 Spirochaeta thermophila DSM 6578
106 964803 964991 + NC_008593.1 Clostridium novyi NT
107 1657602 1657790 + NZ_CP013450.1 Burkholderia cenocepacia
108 1554516 1554704 + NZ_CP020737.1 Paraburkholderia acidophila
109 2882704 2882892 + NZ_CP011503.1 Burkholderia pyrrocinia
110 2778636 2778824 - NZ_CP024934.1 Paraburkholderia graminis
111 542760 542948 + NZ_CP045508.1 Desulfolutivibrio sulfoxidireducens
112 1763398 1763586 - NC_010622.1 Paraburkholderia phymatum STM815
113 1140384 1140572 + NZ_CP026111.1 Paraburkholderia terrae
114 1174837 1175025 + NZ_CP046913.1 Paraburkholderia acidisoli
115 1712509 1712697 + NZ_AP014936.1 Sulfurifustis variabilis
116 4624346 4624534 + NZ_CP021904.1 Alkalitalea saponilacus
117 1517243 1517431 - NC_014209.1 Thermoanaerobacter mathranii subsp. mathranii str. A3
118 1535537 1535725 - NC_013921.1 Thermoanaerobacter italicus Ab9
119 1685471 1685659 + NZ_CP013414.1 Burkholderia ubonensis
120 2432347 2432535 + NZ_CP022989.1 Paraburkholderia aromaticivorans
121 1162481 1162669 + NZ_CP046909.1 Paraburkholderia acidiphila
122 2049946 2050134 - NZ_CP009727.1 Burkholderia mallei
123 835738 835926 - NZ_CP015958.1 Paraburkholderia caribensis
124 2955983 2956171 - NC_007651.1 Burkholderia thailandensis E264
125 46024 46212 - NZ_CP008781.1 Burkholderia pseudomallei
126 4054099 4054287 - NZ_CP009555.1 Burkholderia oklahomensis C6786
127 1610856 1611044 + NZ_CP013401.1 Burkholderia metallica
128 1806610 1806798 - NZ_CP009795.1 Burkholderia dolosa AU0158
129 857823 858011 - NZ_LR130778.1 Petrocella atlantisensis
130 13960 14148 + NZ_LT990039.1 Massilistercora timonensis
131 526308 526505 + NC_012108.1 Desulfobacterium autotrophicum HRM2
132 1682818 1683006 + NZ_CP013459.1 Burkholderia stagnalis
133 1556355 1556552 + NC_011901.1 Thioalkalivibrio sulfidiphilus HL-EbGr7
134 810960 811148 + NC_014964.1 Thermoanaerobacter brockii subsp. finnii Ako-1
135 1654253 1654441 - NC_015958.1 Thermoanaerobacter wiegelii Rt8.B1
136 1736535 1736723 - NZ_AP018725.1 Sulfuriflexus mobilis
137 2871103 2871291 + NC_020291.1 Clostridium saccharoperbutylacetonicum N1-4(HMT)
138 1658656 1658844 + NZ_CP009832.1 Burkholderia multivorans ATCC BAA-247
139 459111 459308 - NC_012780.1 [Eubacterium] eligens ATCC 27750
140 59868 60056 + NC_013223.1 Desulfohalobium retbaense DSM 5692
141 1177218 1177406 + NC_021287.1 Caballeronia insecticola
142 1219570 1219758 + NZ_CP009240.1 Megasphaera elsdenii 14-14
143 1773115 1773303 - NZ_CP014204.2 Clostridium baratii
144 1298750 1298947 + NZ_CP007029.1 Thioalkalivibrio paradoxus ARh 1
145 1766793 1766981 - NZ_LR699011.1 Roseburia hominis
146 3065807 3065995 - NC_022571.1 Clostridium saccharobutylicum DSM 13864
147 2380832 2381017 + NC_011026.1 Chloroherpeton thalassium ATCC 35110
148 2062455 2062643 + NC_015152.1 Sphaerochaeta globosa str. Buddy
149 1425139 1425306 + NC_015702.1 Parachlamydia acanthamoebae UV-7
150 1649991 1650173 + NC_017464.1 Ignavibacterium album JCM 16511
151 45782 45967 + NZ_CP053842.1 Campylobacter corcagiensis
152 922488 922676 + NZ_CP022413.2 Blautia hansenii DSM 20583
153 810128 810316 + NZ_CP030280.1 Blautia argi
154 1603875 1604069 + NZ_CP011971.1 Steroidobacter denitrificans
155 10160203 10160391 - NZ_CP012159.1 Chondromyces crocatus
156 1809095 1809292 - NZ_AP018560.1 Aerosticca soli
157 3069866 3070066 - NZ_CP038029.1 Sphingobacterium psychroaquaticum
158 966638 966826 + NC_014387.1 Butyrivibrio proteoclasticus B316
159 287271 287459 - NZ_CP052766.1 Alteromonas pelagimontana
160 271907 272104 + NC_018020.1 Turneriella parva DSM 21527
161 605522 605710 - NZ_CP013118.1 Salinivirga cyanobacteriivorans
162 3453179 3453382 - NZ_CP027860.1 Ahniella affigens
163 1353807 1353995 + NZ_CP030775.1 Clostridium butyricum
164 2831063 2831251 - NZ_CP022121.1 Dehalobacterium formicoaceticum
165 4723932 4724129 - NC_013132.1 Chitinophaga pinensis DSM 2588
166 2002525 2002713 - NZ_LR590481.1 Hathewaya histolytica
167 2098968 2099153 - NC_009922.1 Alkaliphilus oremlandii OhILAs
168 867192 867392 - NZ_CP046415.1 Guyparkeria halophila
169 1352751 1352942 + NZ_CP018776.1 Staphylococcus condimenti
170 1741538 1741729 - NZ_CP033460.1 Staphylococcus debuckii
171 545290 545487 + NC_018645.1 Desulfobacula toluolica Tol2
172 3016550 3016738 - NZ_CP035807.1 Thiospirochaeta perfilievii
173 3242003 3242188 - NZ_CP019870.1 Clostridioides difficile
174 1460629 1460811 + NZ_CP012547.1 Campylobacter pinnipediorum subsp. pinnipediorum
175 855914 856111 + NZ_CP009056.1 Frischella perrara
176 2468582 2468779 - NC_014376.1 [Clostridium] saccharolyticum WM1
177 60718 60900 - NZ_CP012544.1 Campylobacter showae
178 193022 193210 - NZ_CP028884.1 Borrelia turcica IST7
179 449610 449807 + NZ_CP042433.1 Flavisolibacter ginsenosidimutans
180 2362608 2362802 - NC_016894.1 Acetobacterium woodii DSM 1030
181 6295290 6295484 + NC_015703.1 Runella slithyformis DSM 19594
182 419710 419898 + NC_008576.1 Magnetococcus marinus MC-1
183 2427264 2427446 - NZ_CP012543.1 Campylobacter rectus
184 1992799 1992996 + NC_010814.1 Geobacter lovleyi SZ
185 893036 893224 + NZ_CP007452.1 Peptoclostridium acidaminophilum DSM 3953
186 631690 631878 + NZ_AP018722.1 Thiomicrorhabdus aquaedulcis
187 1892594 1892779 - NZ_LS974202.1 Mesotoga infera
188 916097 916285 - NZ_CP036150.1 Oceanispirochaeta crateris
189 1248407 1248604 + NZ_CP048113.1 Chitinophaga agri
190 3516212 3516412 - NZ_CP072425.1 Pseudoalteromonas viridis
191 1529382 1529573 - NZ_CP071878.1 Mucilaginibacter gossypii
192 1695929 1696111 + NZ_CP053831.1 Campylobacter mucosalis
193 1069912 1070100 + NZ_CP022987.1 Pusillimonas thiosulfatoxidans
194 1385487 1385675 - NC_016630.1 Filifactor alocis ATCC 35896
195 1747327 1747518 - NZ_LR134304.1 Staphylococcus schweitzeri
196 1682852 1683043 - NC_007795.1 Staphylococcus aureus subsp. aureus NCTC 8325
197 3649195 3649392 - NC_009943.1 Desulfococcus oleovorans Hxd3
198 1433941 1434129 + NZ_AP019755.1 Nitrosomonas stercoris
199 130176 130367 + NZ_CP014022.1 Staphylococcus lugdunensis
200 1552719 1552907 - NC_014220.1 Syntrophothermus lipocalidus DSM 12680
201 297204 297389 - NZ_CP053836.1 Halarcobacter ebronensis
202 2499272 2499469 - NZ_CP028897.1 Dongshaea marina
203 2069301 2069486 - NC_014624.2 Eubacterium callanderi
204 706220 706405 - NZ_CP029487.1 Eubacterium maltosivorans
205 3805964 3806149 - NZ_CP019962.1 Eubacterium limosum
206 2945965 2946156 - NZ_CP022743.1 Mucilaginibacter xinganensis
207 1003621 1003818 + NZ_CP064030.1 Dyella caseinilytica
208 2089916 2090104 - NZ_AP018150.1 Mycoavidus cysteinexigens
209 1347779 1347967 + NZ_CP051180.1 Ferrimonas lipolytica
210 3794665 3794856 + NZ_CP042436.1 Mucilaginibacter ginsenosidivorans
211 3604213 3604401 - NZ_AP017312.1 Aneurinibacillus soli
212 3619380 3619577 - NZ_CP023777.1 Chitinophaga caeni
213 1620269 1620457 + NZ_CP046670.1 Alteromonas mediterranea
214 1751115 1751303 - NZ_CP014322.1 Alteromonas addita
215 2393658 2393846 - NC_015554.1 Alteromonas naphthalenivorans
216 1801048 1801236 - NC_014410.1 Thermoanaerobacterium thermosaccharolyticum DSM 571
217 2940753 2940950 + NZ_CP017480.1 Luteibacter rhizovicinus DSM 16549
218 1400590 1400781 - NZ_AP014945.1 Caldimicrobium thiodismutans
219 1813170 1813367 - NZ_CP067057.1 Rahnella aceris
220 1343250 1343447 + NZ_CP028103.1 Fusobacterium varium ATCC 27725
221 1678052 1678249 + NZ_CP028105.1 Fusobacterium ulcerans
222 3353694 3353882 - NC_016633.1 Sphaerochaeta pleomorpha str. Grapes
223 1402277 1402474 + NZ_CP041046.1 Luteibacter pinisoli
224 807859 808047 + NZ_AP018042.1 Labilibaculum antarcticum
225 1269903 1270094 + NZ_CP054139.1 Mucilaginibacter mali
226 1163480 1163671 + NZ_LR134089.1 Staphylococcus saprophyticus
227 2509242 2509439 - NZ_CP040058.1 Anaerostipes rhamnosivorans
228 1119185 1119382 + NZ_CP036345.1 Anaerostipes caccae L1-92
229 2643233 2643430 - NC_016609.1 Niastella koreensis GR20-10
230 4792675 4792863 - NZ_CP039126.1 Blautia producta
231 1806920 1807117 + NZ_CP015581.1 Tatumella citrea
232 3121427 3121624 - NC_005126.1 Photorhabdus laumondii subsp. laumondii TTO1
233 3510060 3510257 - NZ_CP032157.1 Paraflavitalea soli
234 2030785 2030982 - NZ_CP034035.1 Brenneria rubrifaciens
235 97392 97574 + NZ_CP053841.1 Campylobacter blaseri
236 2181821 2182009 - NZ_CP016268.1 Woeseia oceani
237 1142285 1142485 - NZ_CP014991.1 Helicobacter himalayensis
238 796948 797145 - NZ_LN831027.1 Fusobacterium nucleatum subsp. polymorphum
239 706523 706711 + NZ_CP034120.1 Glaciecola amylolytica
240 1611338 1611529 + NZ_CP042909.1 Thermosulfurimonas marina
241 1633065 1633262 + NZ_CP031769.1 Salinimonas sediminis
242 778802 778987 + NC_005090.1 Wolinella succinogenes DSM 1740
243 2692189 2692389 - NZ_CP038254.1 Legionella israelensis
244 571393 571590 - NZ_CP011078.1 Yersinia ruckeri
245 1900691 1900888 + NZ_LR134373.1 Yersinia pseudotuberculosis
246 1644862 1645059 + NZ_CP032487.1 Yersinia hibernica
247 4341193 4341390 - NZ_CP007230.1 Yersinia similis
248 140228 140416 + NC_018068.1 Desulfosporosinus acidiphilus SJ4
249 190248 190436 - NZ_CP015796.1 Borreliella mayonii
250 2250741 2250938 - NC_019902.2 Thioalkalivibrio nitratireducens DSM 14787
251 1306011 1306208 + NZ_CP032364.1 Lachnoanaerobaculum umeaense
252 1419489 1419686 + NZ_CP015772.1 Niabella ginsenosidivorans
253 2118852 2119043 - NZ_CP027770.1 Staphylococcus felis
254 2515112 2515309 - NC_013892.1 Xenorhabdus bovienii SS-2004
255 188293 188496 - NZ_CP044535.1 Borrelia maritima
256 1443413 1443610 - NZ_CP016176.1 Xenorhabdus hominickii
257 1759481 1759669 + NZ_CP008849.1 Alteromonas australica
258 1800418 1800609 - NZ_CP066775.1 Mucilaginibacter ginkgonis
259 2370961 2371152 - NZ_CP032869.1 Mucilaginibacter celer
260 1550362 1550559 + NZ_CP007445.1 Gilliamella apicola
261 3764010 3764201 - NZ_CP053989.1 Niallia circulans
262 1924375 1924575 - NZ_CP013187.1 Pseudoalteromonas phenolica
263 2168680 2168877 - NZ_CP014841.1 Dyella thiooxydans
264 3623271 3623450 - NZ_CP023706.1 Edwardsiella tarda
265 1947087 1947266 - NZ_CP016043.1 Edwardsiella hoshinae
266 1818268 1818447 + NC_012779.2 Edwardsiella ictaluri 93-146
267 3870959 3871138 - NZ_CP006664.1 Edwardsiella anguillarum ET080813
268 1552298 1552495 + NZ_LR134327.1 Aggregatibacter aphrophilus ATCC 33389
269 3208208 3208396 - NZ_CP014150.1 Paeniclostridium sordellii
270 3443121 3443318 - NZ_AP021874.1 Desulfosarcina alkanivorans
271 2701345 2701536 - NZ_CP060723.1 Pedobacter roseus
272 1832313 1832510 - NZ_LR134510.1 Actinobacillus delphinicola
273 1372751 1372948 + NZ_LS483443.1 Aggregatibacter segnis ATCC 33393
274 25630 25812 + NZ_CP015578.1 Campylobacter lanienae NCTC 13004
275 2066124 2066312 + NC_014541.1 Ferrimonas balearica DSM 9799
276 7997969 7998163 + NZ_CP025096.1 Spirosoma pollinicola
277 321311 321508 + NZ_CP007035.1 Niabella soli DSM 19437
278 4171560 4171763 + NZ_CP011104.1 Photorhabdus thracensis
279 27751 27936 - NZ_CP021377.1 Oceanisphaera profunda
280 2230736 2230933 + NZ_CP038498.1 Pectobacterium punjabense
281 3823926 3824123 + NZ_CP047495.1 Pectobacterium brasiliense
282 2556888 2557085 - NZ_CP051652.1 Pectobacterium carotovorum
283 2651297 2651494 - NZ_CP034938.1 Pectobacterium odoriferum
284 1040739 1040936 + NZ_CP017482.1 Pectobacterium polaris
285 1057629 1057820 + NZ_CP016020.1 Bacillus weihaiensis
286 93688 93870 - NZ_CP059443.1 Campylobacter fetus
287 120024 120206 - NZ_CP010995.1 Campylobacter iguaniorum
288 145462 145659 + NZ_CP049115.1 Pantoea stewartii
289 2618871 2619068 - NC_017033.1 Frateuria aurantia DSM 6220
290 2171412 2171591 + NZ_CP050150.1 Hafnia alvei
291 457804 457992 - NZ_LT996885.1 Dialister massiliensis
292 2616436 2616633 - NC_017554.1 Pantoea ananatis PA13
293 3629665 3629856 - NZ_CP042593.1 Bacillus dafuensis
294 3138676 3138867 + NZ_CP041305.1 Cytobacillus ciccensis
295 1895358 1895546 - NC_012691.1 Tolumonas auensis DSM 9187
296 1498468 1498665 + NZ_FO704551.1 Xenorhabdus poinarii G6
297 1764824 1765021 + NZ_FO704550.1 Xenorhabdus doucetiae
298 1967411 1967608 + NZ_CP072455.1 Xenorhabdus budapestensis
299 2693417 2693614 - NZ_LR134201.1 Cedecea lapagei
300 2098806 2099003 + NC_012962.1 Photorhabdus asymbiotica
301 187514 187702 - NZ_CP007022.1 Borrelia parkeri HR1
302 2025506 2025703 + NZ_CP042220.2 Dickeya poaceiphila
303 2502899 2503096 - NZ_LT615367.1 Dickeya aquatica
304 2235725 2235922 + NC_012912.1 Dickeya chrysanthemi Ech1591
305 171681 171878 + NZ_CP009460.1 Dickeya fangzhongdai
306 1786854 1787051 + NZ_LN907827.1 Erwinia gerundensis
307 1716111 1716308 + NC_013961.1 Erwinia amylovora CFBP1430
308 2088455 2088652 - NC_010694.1 Erwinia tasmaniensis Et1/99
309 1813429 1813626 + NZ_CP023567.1 Erwinia pyrifoliae
310 2298830 2299027 - NZ_CP045720.1 Pantoea eucalypti
311 2293662 2293859 - NZ_CP038853.1 Pantoea vagans
312 1952834 1953031 - NZ_CP060401.1 Xenorhabdus nematophila
313 2132079 2132276 + NC_014306.1 Erwinia billingiae Eb661
314 119844 120032 + NC_018515.1 Desulfosporosinus meridiei DSM 13257
315 4090217 4090405 + NZ_CP040530.1 Bacteroides thetaiotaomicron
316 348808 348996 + NZ_CP012938.1 Bacteroides ovatus
317 186491 186679 - NZ_CP013704.1 Borrelia anserina Es
318 3118852 3119049 + NZ_CP026364.1 Proteus hauseri
319 1601618 1601815 + NZ_CP047349.1 Proteus terrae subsp. cibarius
320 3410189 3410386 - NZ_CP023536.1 Providencia alcalifaciens
321 2679315 2679512 - NZ_CP048796.1 Providencia vermicola
322 2491329 2491526 + NZ_CP029736.1 Providencia rettgeri
323 1065422 1065619 + NZ_CP031123.2 Providencia huaxiensis
324 2298327 2298524 + NZ_CP065044.1 Pectobacterium aroidearum
325 2930817 2931014 - NZ_CP023525.1 Cedecea neteri
326 200088 200276 - NC_011244.1 Borrelia recurrentis A1
327 2599346 2599543 - NZ_LS483422.1 Providencia heimbachae
328 2631981 2632178 - NZ_AP023184.1 Buttiauxella agrestis
329 2347425 2347622 + NZ_CP009125.1 Pectobacterium atrosepticum
330 1732862 1733059 - NZ_CP015749.1 Pectobacterium parmentieri
331 4020613 4020810 + NZ_CP015750.1 Pectobacterium wasabiae CFBP 3304
332 3613254 3613451 + NZ_CP065640.1 Serratia rubidaea
333 2828448 2828645 - NZ_CP071320.1 Serratia ureilytica
334 1582807 1583004 + NZ_CP016948.1 Serratia surfactantfaciens
335 2319903 2320100 + NZ_LT906479.1 Serratia ficaria
336 2280306 2280503 + NZ_CP038662.1 Serratia nematodiphila
337 2261665 2261862 + NZ_CP048784.1 Serratia liquefaciens
338 3850293 3850490 - NZ_CP007044.2 Chania multitudinisentens RB-25
339 249418 249615 + NZ_CP009781.1 Yersinia aldovae 670-83
340 1641151 1641348 - NC_014654.1 Halanaerobium hydrogeniformans
341 1957435 1957623 + NZ_LN877293.1 Bacteroides fragilis
342 2430534 2430731 - NC_012880.1 Musicola paradisiaca Ech703
343 1184157 1184357 + NZ_AP018933.1 Zymobacter palmae
344 187590 187778 - NC_008710.1 Borrelia turicatae 91E135
345 1377270 1377467 - NC_014758.1 Calditerrivibrio nitroreducens DSM 19672
346 2510637 2510834 - NZ_CP025799.1 Dickeya zeae
347 2318083 2318271 - NZ_AP017928.1 Methylocaldum marinum
348 833179 833376 - NZ_CP009787.1 Yersinia rohdei
349 3310990 3311187 + NZ_CP054043.1 Yersinia mollaretii ATCC 43969
350 2137100 2137297 + NZ_CP043727.1 Yersinia canariae
351 2519676 2519873 - NZ_CP011118.1 Yersinia enterocolitica
352 2467199 2467396 - NZ_CP046293.1 Yersinia intermedia
353 1100842 1101039 + NC_010554.1 Proteus mirabilis HI4320
354 1648178 1648375 + NC_017910.1 Shimwellia blattae DSM 4481 = NBRC 105725
355 1363874 1364062 + NZ_CP035704.1 Pseudolysobacter antarcticus
356 4593435 4593623 - NZ_CP007451.1 Draconibacterium orientale
357 2593297 2593494 - NC_014500.1 Dickeya dadantii 3937
358 3075182 3075382 - NZ_CP013742.1 Legionella pneumophila
359 4496166 4496363 + NZ_CP011254.1 Serratia fonticola
360 132746 132934 - NC_007512.1 Pelodictyon luteolum DSM 273
361 1761848 1762045 + NZ_CP034148.1 Pantoea agglomerans
362 1637758 1637937 + NZ_CP029185.2 Limnobaculum parvum
363 1717221 1717400 + NZ_LR134531.1 Pragia fontium
364 3567042 3567230 - NZ_CP026538.1 Desulfovibrio carbinolicus
365 1648348 1648527 + NZ_CP034752.1 Jinshanibacter zhutongyuii
366 368202 368393 + NZ_CP046996.1 Dehalobacter restrictus
367 4762785 4762982 - NZ_CP015137.1 Dickeya solani IPO 2222
368 911725 911910 + NZ_LS483446.1 Helicobacter mustelae
369 1761098 1761277 + NZ_LS483470.1 Leminorella richardii
370 731104 731283 + NZ_LR134365.1 Cardiobacterium hominis
371 1913067 1913264 - NZ_CP014137.1 Brenneria goodwinii
372 188777 188965 - NZ_CP028861.1 Borreliella garinii
373 1197960 1198154 - NC_014655.1 Leadbetterella byssophila DSM 17132
374 187867 188055 - NZ_CP011060.1 Borrelia hermsii CC1
375 3193609 3193806 - NZ_CP023009.1 Lonsdalea britannica
376 2507604 2507801 - NZ_CP034036.1 Brenneria nigrifluens DSM 30175 = ATCC 13028
377 71510 71692 - NZ_CP053826.1 Campylobacter curvus
378 2519523 2519720 - NZ_CP031560.1 Dickeya dianthicola
379 1951290 1951487 - NZ_CP065534.1 Lonsdalea populi
380 735173 735358 + NZ_CP021376.1 Oceanisphaera avium
381 1892060 1892257 + NZ_AP022508.1 Enterobacter bugandensis
382 1886755 1886952 + NC_015968.1 Enterobacter soli
383 670145 670342 + NZ_CP038469.1 Citrobacter tructae
384 1130254 1130451 + NZ_CP017279.1 Enterobacter ludwigii
385 1579816 1580013 - NZ_CP045769.1 Enterobacter cancerogenus
386 252765 252962 - NZ_CP044098.1 Citrobacter portucalensis
387 4817536 4817733 + NZ_CP033744.1 Citrobacter freundii
388 3572120 3572317 + NZ_LT556085.1 Citrobacter amalonaticus
389 3427488 3427685 - NZ_CP045205.1 Citrobacter telavivensis
390 124010 124192 - NZ_CP053828.1 Campylobacter hyointestinalis subsp. lawsonii
391 482981 483157 + NZ_LT906459.1 Odoribacter splanchnicus
392 125320 125502 - NZ_CP012541.1 Campylobacter concisus
393 188739 188927 - NC_015921.1 Borreliella bissettii DN127
394 2335260 2335457 + NZ_LR134494.1 Serratia quinivorans
395 2241662 2241859 + NC_015567.1 Serratia plymuthica AS9
396 1649834 1650025 - NZ_CP011366.1 Salinicoccus halodurans
397 787146 787343 + NZ_CP023529.1 Lelliottia amnigena
398 2100531 2100728 + NZ_CP045845.1 Kluyvera intermedia
399 305602 305799 + NZ_CP011390.1 Flavisolibacter tropicus
400 4696386 4696568 - NC_007645.1 Hahella chejuensis KCTC 2396
401 2047182 2047391 + NZ_AP021898.1 Akkermansia muciniphila
402 3852904 3853101 - NZ_CP019706.1 Pantoea alhagi
403 2019843 2020040 + NZ_CP061511.1 Mixta calida
404 2070909 2071106 + NZ_CP026377.1 Mixta gaviniae
405 1212126 1212323 + NZ_CP028271.1 Mixta intestinalis
406 526779 526964 + NZ_CP019684.1 Campylobacter sputorum bv. paraureolyticus LMG 11764
407 1959148 1959345 + NZ_CP054058.1 Scandinavium goeteborgense
408 308920 309120 - NZ_CP072133.1 Pseudoalteromonas xiamenensis
409 3652858 3653055 + NZ_CP042941.1 Atlantibacter hermannii
410 1323394 1323594 - NZ_CP031961.1 Pseudoalteromonas tunicata
411 3903576 3903764 + NC_014041.1 Zunongwangia profunda SM-A87
412 888523 888708 + NC_014810.2 Helicobacter felis ATCC 49179
413 427748 427939 + NC_018018.1 Bernardetia litoralis DSM 6794
414 5159206 5159403 + NZ_CP014136.1 Gibbsiella quercinecans
415 1883416 1883604 - NZ_CP028811.1 Flavobacterium magnum
416 3572350 3572544 - NC_018691.1 Alcanivorax dieselolei B5
417 1545941 1546138 - NZ_CP027107.1 Cronobacter sakazakii
418 2330588 2330785 - NZ_CP013940.1 Cronobacter malonaticus LMG 23826
419 1834396 1834593 + NZ_CP012257.1 Cronobacter universalis NCTC 9529
420 1840924 1841121 + NZ_CP012264.1 Cronobacter condimenti 1330
421 2167938 2168135 - NZ_CP012268.1 Cronobacter muytjensii ATCC 51329
422 1955157 1955354 + NZ_CP061527.1 Shigella dysenteriae
423 1866760 1866957 + NZ_CP012266.1 Cronobacter dublinensis subsp. dublinensis LMG 23823
424 2029538 2029735 + NZ_LR134340.1 Escherichia marmotae
425 4388366 4388563 + NZ_AP019007.1 Enterobacter oligotrophicus
426 3826610 3826807 + NZ_CP053416.1 Salmonella bongori
427 335778 335975 + NZ_CP057657.1 Escherichia fergusonii
428 1547009 1547206 + NC_004337.2 Shigella flexneri 2a str. 301
429 1799802 1799999 - NC_000913.3 Escherichia coli str. K-12 substr. MG1655
430 1734189 1734386 - NZ_AP014857.1 Escherichia albertii
431 2647682 2647879 - NZ_CP035129.1 Kosakonia cowanii
432 2544718 2544915 - NZ_CP012871.1 [Enterobacter] lignolyticus
433 1925322 1925519 + NZ_CP027986.1 Enterobacter sichuanensis
434 1666433 1666630 - NC_009792.1 Citrobacter koseri ATCC BAA-895
435 1860535 1860732 + NZ_CP017184.1 Enterobacter roggenkampii
436 2790649 2790846 - NZ_CP013990.1 Leclercia adecarboxylata
437 633653 633850 - NZ_CP025034.2 Enterobacter sp. SGAir0187
438 1920363 1920560 + NZ_CP009756.1 Enterobacter cloacae
439 1414763 1414960 + NC_003197.2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
440 1023817 1024014 - NZ_CP016337.1 Kosakonia sacchari
441 2101706 2101903 + NZ_CP063425.1 Kosakonia pseudosacchari
442 975196 975393 - NZ_CP045300.1 Kosakonia arachidis
443 2141685 2141882 + NZ_CP043318.1 Enterobacter chengduensis
444 3049591 3049788 - NZ_LR134475.1 Klebsiella aerogenes
445 2077196 2077393 + NZ_CP065838.1 Klebsiella quasipneumoniae
446 2190916 2191113 + NZ_CP041247.1 Raoultella electrica
447 3160025 3160222 - NC_016845.1 Klebsiella pneumoniae subsp. pneumoniae HS11286
448 1434507 1434704 + NC_013716.1 Citrobacter rodentium ICC168
449 3915125 3915322 - NZ_CP020388.1 Pluralibacter gergoviae
450 3126125 3126322 - NZ_CP014007.2 Kosakonia oryzae
451 2686332 2686529 + NZ_CP051548.1 Phytobacter diazotrophicus
452 4998492 4998689 - NZ_CP026047.1 Raoultella planticola
453 2399652 2399849 - NC_002695.2 Escherichia coli O157:H7 str. Sakai
454 1423745 1423942 + NZ_CP011602.1 Phytobacter ursingii
455 2129050 2129247 + NZ_CP054254.1 Klebsiella variicola
456 2271115 2271312 + NZ_CP046672.1 Raoultella ornithinolytica
457 2278704 2278901 + NZ_CP050508.1 Raoultella terrigena
458 2058348 2058545 + NZ_CP015113.1 Kosakonia radicincitans
459 2438850 2439047 + NZ_CP060111.1 Klebsiella michiganensis
460 2491027 2491224 + NZ_CP036175.1 Klebsiella huaxiensis
461 1791025 1791213 + NC_010337.2 Heliomicrobium modesticaldum Ice1
462 3480462 3480659 + NZ_CP040428.1 Jejubacter calystegiae
463 3776369 3776557 + NZ_CP029186.1 Flavobacterium album
464 20090 20278 + NZ_CP054494.1 Flavobacterium columnare
465 1435461 1435658 + NZ_CP040449.1 Aeromonas simiae
466 581014 581202 + NZ_CP016359.1 Gramella flava JLT2011
467 2121484 2121672 + NZ_CP043046.1 Pigmentiphaga aceris
468 2330931 2331119 + NZ_CP050851.1 Aeromonas hydrophila
469 672544 672732 - NC_008571.1 Gramella forsetii KT0803
470 424676 424861 + NC_004917.1 Helicobacter hepaticus ATCC 51449
471 2307456 2307650 - NZ_CP004387.1 Alcanivorax pacificus W11-5
472 914337 914528 - NC_015714.1 Treponema paraluiscuniculi Cuniculi A
473 2005083 2005271 - NZ_CP029187.1 Flavobacterium pallidum
474 2109578 2109772 - NC_008260.1 Alcanivorax borkumensis SK2
475 3685784 3685972 + NZ_CP042831.1 Flavobacterium alkalisoli
476 1783866 1784054 - NZ_CP038810.1 Flavobacterium sangjuense
477 1398434 1398625 - NZ_CP014234.1 Moraxella osloensis
478 1289027 1289215 + NZ_CP031115.1 Rubrobacter indicoceani
479 1675571 1675759 + NZ_CP017477.1 Polaribacter vadi
++ More..
Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_CP018099.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF01409.22 0.67 318 728.5 same-strand tRNA synthetases class II core domain (F)
2 PF02912.20 0.66 316 720 same-strand Aminoacyl tRNA synthetase class II, N-terminal domain
3 PF00453.20 0.99 472 43 same-strand Ribosomal protein L20
4 PF00707.24 0.92 436 96 same-strand Translation initiation factor IF-3, C-terminal domain
5 PF00587.27 0.75 358 655 same-strand tRNA synthetase class II core domain (G, H, P, S and T)
6 PF03129.22 0.75 358 655 same-strand Anticodon binding domain
7 PF07973.16 0.75 358 655.5 same-strand Threonyl and Alanyl tRNA synthetase second additional domain
8 PF02824.23 0.71 339 672.5 same-strand TGS domain
++ More..