Protein Information |
Information Type | Description |
---|---|
Protein name | Protein-export membrane protein SecG |
NCBI Accession ID | AE000657.1 |
Organism | Aquifex aeolicus (strain VF5) |
Left | 61696 |
Right | 61998 |
Strand | + |
Nucleotide Sequence | ATGTACTACGCTCTCCTTACACTATTCGTAATAATTGCAGTTGTACTCATTATCTCCACGCTCCTTCAAAAGGGAAGGGGAGACGTCGGTGCGGCTTTCGGCGGTGGTATGGGGCAGTCCATATTCGGCGTCGGCGGAGTTGAGACTATCCTCACAAAAGCCACTTACTGGCTTGGAGCACTCTTTTTAGTCCTTGCACTCCTTCTTTCGGTCATTCCAAAGGAAAAGGGTTCTGTAGTTGAGAAAAGTGTTCAAACTGAACAAAGTGAAGGTAAAGGAACTACTCAAGAAAGTGGAAAGTGA |
Sequence | MYYALLTLFVIIAVVLIISTLLQKGRGDVGAAFGGGMGQSIFGVGGVETILTKATYWLGALFLVLALLLSVIPKEKGSVVEKSVQTEQSEGKGTTQESGK |
Source of smORF | Swiss-Prot |
Function | Subunit of the protein translocation channel SecYEG. |
Pubmed ID | 9537320 18923516 |
Domain | CDD:415590 |
Functional Category | Others |
Uniprot ID | O66505 |
ORF Length (Amino Acid) | 100 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 61696 | 61998 | + | NC_000918.1 | Aquifex aeolicus VF5 |
2 | 590210 | 590548 | + | NC_017161.1 | Hydrogenobacter thermophilus TK-6 |
3 | 863682 | 864020 | + | NC_013894.1 | Thermocrinis albus DSM 14484 |
4 | 45061 | 45399 | - | NZ_CP007028.1 | Thermocrinis ruber |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF01595.22 | 1.0 | 4 | 709.0 | same-strand | Cyclin M transmembrane N-terminal domain |
2 | PF03471.19 | 1.0 | 4 | 709.0 | same-strand | Transporter associated domain |
3 | PF00571.30 | 1.0 | 4 | 709 | same-strand | CBS domain |