Result : O51318
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Glutamyl-tRNA(Gln) amidotransferase subunit C (Glu-ADT subunit C) (EC 6.3.5.-) |
| NCBI Accession ID | AE000783.1 |
| Organism | Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) |
| Left | 351056 |
| Right | 351331 |
| Strand | - |
| Nucleotide Sequence | TTGAAAGATATACATTTAAAAAATAGCTTAAAATTAAGCTTAGTGACACTTAGTAGAGAGAGTGAAGATAAATTTATTTCAAAATTTGAGAAAGTTATTAAATTGGTTAATAAAATTTCAAATTTTGAGGTTCAAATTAATTTTAATGCTAATAAGAAAAAGATTTCTACGTTGCGCGAGGATAAAGTAGAATTTTCTCTTTCTATTGAAGCAATTAAAAAACTTAGTAATTCGTTTTTAGATGGATATTTTTCATCTCCTAAAATATTGGAGTAA |
| Sequence | MKDIHLKNSLKLSLVTLSRESEDKFISKFEKVIKLVNKISNFEVQINFNANKKKISTLREDKVEFSLSIEAIKKLSNSFLDGYFSSPKILE |
| Source of smORF | Swiss-Prot |
| Function | Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) (By similarity). {ECO:0000250}. |
| Pubmed ID | 9403685 |
| Domain | CDD:412411 |
| Functional Category | Others |
| Uniprot ID | O51318 |
| ORF Length (Amino Acid) | 91 |
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| Conservation Analysis |
No. of Species: 10
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 349515 | 349790 | - | NC_015921.1 | Borreliella bissettii DN127 |
| 2 | 351856 | 352131 | - | NZ_CP015796.1 | Borreliella mayonii |
| 3 | 350546 | 350821 | - | NZ_CP028861.1 | Borreliella garinii |
| 4 | 349647 | 349922 | - | NZ_CP044535.1 | Borrelia maritima |
| 5 | 346863 | 347111 | - | NZ_CP013704.1 | Borrelia anserina Es |
| 6 | 354450 | 354725 | - | NZ_CP011060.1 | Borrelia hermsii CC1 |
| 7 | 363972 | 364247 | - | NZ_CP028884.1 | Borrelia turcica IST7 |
| 8 | 553857 | 554132 | + | NZ_CP024333.1 | Borrelia miyamotoi |
| 9 | 352959 | 353243 | - | NZ_CP007022.1 | Borrelia parkeri HR1 |
| 10 | 353082 | 353366 | - | NC_008710.1 | Borrelia turicatae 91E135 |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_015921.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00380.21 | 1.0 | 10 | 4220.5 | same-strand | Ribosomal protein S9/S16 |
| 2 | PF00572.20 | 1.0 | 10 | 3760.5 | same-strand | Ribosomal protein L13 |
| 3 | PF02934.17 | 1.0 | 10 | 1446.0 | same-strand | GatB/GatE catalytic domain |
| 4 | PF02637.20 | 1.0 | 10 | 1446.0 | same-strand | GatB domain |
| 5 | PF01425.23 | 1.0 | 10 | 11.0 | same-strand | Amidase |
| 6 | PF13361.8 | 1.0 | 10 | 10.0 | same-strand | UvrD-like helicase C-terminal domain |
| 7 | PF13245.8 | 1.0 | 10 | 10.0 | same-strand | AAA domain |
| 8 | PF13538.8 | 1.0 | 10 | 10.0 | same-strand | UvrD-like helicase C-terminal domain |
| 9 | PF13413.8 | 1.0 | 10 | 2107.5 | same-strand | Helix-turn-helix domain |
| 10 | PF12844.9 | 1.0 | 10 | 2107.5 | same-strand | Helix-turn-helix domain |
| 11 | PF03548.17 | 0.6 | 6 | 3319.5 | same-strand | Outer membrane lipoprotein carrier protein LolA |
| 12 | PF05670.15 | 1.0 | 10 | 4146.5 | opposite-strand | NFACT protein RNA binding domain |
| 13 | PF00224.23 | 1.0 | 10 | 5664.5 | opposite-strand | Pyruvate kinase, barrel domain |
| 14 | PF02887.18 | 1.0 | 10 | 5664.5 | opposite-strand | Pyruvate kinase, alpha/beta domain |
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