Result : O33947
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Muconolactone Delta-isomerase 1 (MIase 1) (EC 5.3.3.4) |
| NCBI Accession ID | U77658.2 |
| Organism | Acinetobacter lwoffii |
| Left | 5384 |
| Right | 5674 |
| Strand | + |
| Nucleotide Sequence | ATGCTTTTCCATGTACGCATGGATGTGAATATTCCGGACGATATGCCGGTCGAGGTCGCAGACGAAATCAAGGCACGCGAGAAGGCGTATTCGCAGGCGTTGCAAAAGAGCGGCAAATGGCCTCACATCTGGCGCCTCGTTGGTGAGTATGCGAACTACAGCATCTTCGATGTTGAGAGCAATGCGGAACTGCACGGCATCCTGACCGGACTGCCGCTGTTTTCATATATGAAGATCGAGGTGACGCCGCTGTGCCGTCACCCGTCGTCGATTCGCGACGACGAGTCGTGA |
| Sequence | MLFHVRMDVNIPDDMPVEVADEIKAREKAYSQALQKSGKWPHIWRLVGEYANYSIFDVESNAELHGILTGLPLFSYMKIEVTPLCRHPSSIRDDES |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl01992. Profile Description: Muconolactone delta-isomerase. Members of this protein family are muconolactone delta-isomerase (EC 5.3.3.4), the CatC protein of the ortho cleavage pathway for metabolizing aromatic compounds by way of catechol. [Energy metabolism, Other] |
| Pubmed ID | 9260969 9473520 |
| Domain | CDD:413152 |
| Functional Category | Others |
| Uniprot ID | O33947 |
| ORF Length (Amino Acid) | 96 |
++ More..
| Conservation Analysis |
No. of Species: 275
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 261939 | 262229 | - | NZ_CP046912.1 | Paraburkholderia acidiphila |
| 2 | 1758463 | 1758753 | - | NZ_CP016022.1 | Ralstonia insidiosa |
| 3 | 125814 | 126104 | - | NZ_CP009831.1 | Burkholderia multivorans ATCC BAA-247 |
| 4 | 633821 | 634111 | - | NZ_CP009831.1 | Burkholderia multivorans ATCC BAA-247 |
| 5 | 121074 | 121364 | - | NZ_CP011257.1 | Ralstonia mannitolilytica |
| 6 | 1006136 | 1006426 | - | NZ_CP046916.1 | Paraburkholderia acidisoli |
| 7 | 1374702 | 1374992 | - | NZ_CP049137.1 | Paraburkholderia tropica |
| 8 | 105833 | 106123 | + | NZ_CP017561.1 | Paraburkholderia sprentiae WSM5005 |
| 9 | 367347 | 367637 | - | NZ_CP035901.1 | Burkholderia glumae |
| 10 | 57392 | 57682 | + | NZ_CP020613.1 | Paracoccus contaminans |
| 11 | 1642663 | 1642953 | - | NZ_CP015881.1 | Ensifer adhaerens |
| 12 | 2533721 | 2534011 | - | NZ_CP024935.1 | Paraburkholderia graminis |
| 13 | 1778195 | 1778473 | - | NZ_CP017755.1 | Cupriavidus malaysiensis |
| 14 | 1783802 | 1784086 | + | NZ_CP017755.1 | Cupriavidus malaysiensis |
| 15 | 1833719 | 1834009 | + | NZ_CP071766.1 | Acinetobacter towneri |
| 16 | 2710794 | 2711084 | - | NZ_CP002581.1 | Burkholderia plantarii |
| 17 | 1955418 | 1955708 | + | NZ_CP041970.1 | Acinetobacter dispersus |
| 18 | 1475174 | 1475464 | - | NZ_CP044483.1 | Acinetobacter schindleri |
| 19 | 2648797 | 2649087 | + | NZ_CP044483.1 | Acinetobacter schindleri |
| 20 | 391581 | 391862 | - | NZ_CP059694.1 | Gordonia rubripertincta |
| 21 | 1726462 | 1726752 | - | NZ_CP035934.2 | Acinetobacter cumulans |
| 22 | 1698806 | 1699096 | - | NZ_AP014630.1 | Acinetobacter guillouiae |
| 23 | 1420796 | 1421086 | + | NC_016603.1 | Acinetobacter pittii PHEA-2 |
| 24 | 1726937 | 1727227 | - | NZ_CP015121.1 | Acinetobacter baumannii |
| 25 | 1866740 | 1867030 | - | NZ_CP065820.1 | Acinetobacter seifertii |
| 26 | 2014318 | 2014608 | + | NZ_CP065820.1 | Acinetobacter seifertii |
| 27 | 268013 | 268291 | + | NZ_CP062804.1 | Cupriavidus basilensis |
| 28 | 3689841 | 3690131 | - | NZ_CP070518.1 | Acinetobacter calcoaceticus |
| 29 | 2509564 | 2509854 | + | NZ_CP016948.1 | Serratia surfactantfaciens |
| 30 | 1810790 | 1811080 | + | NZ_CP049916.1 | Acinetobacter lanii |
| 31 | 3779684 | 3779974 | - | NZ_CP040105.1 | Acinetobacter nosocomialis M2 |
| 32 | 2365215 | 2365505 | - | NZ_CP012808.1 | Acinetobacter equi |
| 33 | 1643750 | 1644025 | - | NZ_CP021359.1 | Acidovorax carolinensis |
| 34 | 2083635 | 2083919 | - | NZ_CP033972.1 | Gordonia insulae |
| 35 | 3875647 | 3875937 | + | NZ_CP029451.1 | Sinorhizobium fredii CCBAU 25509 |
| 36 | 424531 | 424809 | - | NZ_CP039289.1 | Cupriavidus necator H16 |
| 37 | 404460 | 404735 | - | NZ_CP039289.1 | Cupriavidus necator H16 |
| 38 | 3208598 | 3208876 | + | NZ_CP065748.1 | Delftia lacustris |
| 39 | 455277 | 455561 | + | NZ_CP043575.1 | Comamonas koreensis |
| 40 | 3205613 | 3205903 | + | NZ_CP038662.1 | Serratia nematodiphila |
| 41 | 1970916 | 1971206 | + | NZ_CP029397.2 | Acinetobacter defluvii |
| 42 | 1948246 | 1948536 | + | NZ_CP014945.1 | Psychrobacter alimentarius |
| 43 | 5275355 | 5275633 | - | NZ_CP020809.1 | Mycobacterium dioxanotrophicus |
| 44 | 2061971 | 2062255 | + | NZ_LN831039.1 | Mycolicibacterium smegmatis |
| 45 | 3514411 | 3514686 | - | NZ_CP003915.1 | Advenella mimigardefordensis DPN7 |
| 46 | 1324055 | 1324345 | - | NZ_CP016895.1 | Acinetobacter larvae |
| 47 | 538524 | 538802 | - | NZ_CP026112.1 | Paraburkholderia terrae |
| 48 | 188725 | 189015 | + | NZ_CP026112.1 | Paraburkholderia terrae |
| 49 | 1881297 | 1881584 | + | NZ_CP054058.1 | Scandinavium goeteborgense |
| 50 | 1445845 | 1446135 | + | NC_005966.1 | Acinetobacter baylyi ADP1 |
| 51 | 2098281 | 2098559 | + | NZ_CP032519.1 | Cupriavidus oxalaticus |
| 52 | 2256523 | 2256801 | - | NC_008781.1 | Polaromonas naphthalenivorans CJ2 |
| 53 | 1614054 | 1614335 | + | NZ_CP027114.1 | Gordonia alkanivorans |
| 54 | 4453908 | 4454192 | - | NC_013441.1 | Gordonia bronchialis DSM 43247 |
| 55 | 4930040 | 4930318 | + | NZ_AP022567.1 | Mycolicibacterium mageritense |
| 56 | 3376455 | 3376730 | - | NC_017964.1 | Advenella kashmirensis WT001 |
| 57 | 2827384 | 2827674 | + | NZ_CP032134.1 | Acinetobacter chinensis |
| 58 | 595262 | 595552 | + | NZ_CP021435.1 | Halomonas beimenensis |
| 59 | 1581270 | 1581560 | + | NZ_CP021435.1 | Halomonas beimenensis |
| 60 | 1084712 | 1085002 | + | NC_009511.1 | Sphingomonas wittichii RW1 |
| 61 | 1048352 | 1048630 | - | NZ_CP018863.1 | Arthrobacter crystallopoietes |
| 62 | 3735806 | 3736090 | + | NC_006361.1 | Nocardia farcinica IFM 10152 |
| 63 | 1656175 | 1656465 | - | NZ_CP024632.1 | Acinetobacter junii |
| 64 | 1270736 | 1271026 | - | NZ_CP024632.1 | Acinetobacter junii |
| 65 | 6294061 | 6294354 | - | NZ_CP012150.1 | Mycobacterium goodii |
| 66 | 1794795 | 1795085 | + | NZ_CP048812.1 | Halomonas socia |
| 67 | 2019164 | 2019454 | - | NZ_CP011158.1 | Moraxella ovis |
| 68 | 3264230 | 3264520 | + | NZ_LT906479.1 | Serratia ficaria |
| 69 | 3054972 | 3055262 | - | NZ_LT906469.1 | Mycolicibacter terrae |
| 70 | 859201 | 859476 | + | NZ_CP054840.1 | Acidovorax antarcticus |
| 71 | 4239103 | 4239393 | - | NZ_CP020388.1 | Pluralibacter gergoviae |
| 72 | 3594165 | 3594458 | - | NZ_LR134355.1 | Mycolicibacterium chitae |
| 73 | 2136188 | 2136466 | + | NZ_CP039287.1 | Cupriavidus necator H16 |
| 74 | 483367 | 483645 | - | NZ_CP022991.1 | Paraburkholderia aromaticivorans |
| 75 | 4431210 | 4431494 | - | NC_016906.1 | Gordonia polyisoprenivorans VH2 |
| 76 | 1452695 | 1452973 | - | NC_010170.1 | Bordetella petrii |
| 77 | 4792994 | 4793269 | + | NC_010170.1 | Bordetella petrii |
| 78 | 43907 | 44197 | - | NZ_CP012621.1 | Zobellella denitrificans |
| 79 | 3568168 | 3568458 | - | NZ_CP048602.1 | Halomonas piezotolerans |
| 80 | 3880059 | 3880334 | + | NZ_CP013119.1 | Alcaligenes faecalis |
| 81 | 3072999 | 3073295 | - | NZ_CP016278.1 | Diaphorobacter polyhydroxybutyrativorans |
| 82 | 17847 | 18137 | + | NZ_CP049249.1 | Rhizobium rhizoryzae |
| 83 | 1196857 | 1197147 | + | NZ_CP059082.1 | Halomonas titanicae |
| 84 | 4314692 | 4314982 | - | NZ_CP065135.1 | Halomonas venusta |
| 85 | 4078898 | 4079188 | + | NZ_CP065135.1 | Halomonas venusta |
| 86 | 286758 | 287048 | + | NZ_CP011494.1 | Marinobacter psychrophilus |
| 87 | 3298173 | 3298463 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 88 | 4093789 | 4094079 | - | NZ_CP013106.1 | Halomonas huangheensis |
| 89 | 1785853 | 1786155 | - | NC_010681.1 | Paraburkholderia phytofirmans PsJN |
| 90 | 2429089 | 2429379 | - | NC_010681.1 | Paraburkholderia phytofirmans PsJN |
| 91 | 381140 | 381415 | + | NZ_CP017754.1 | Cupriavidus malaysiensis |
| 92 | 277089 | 277379 | + | NZ_CP040017.1 | Massilia umbonata |
| 93 | 2036177 | 2036461 | + | NZ_AP022598.1 | Mycolicibacterium parafortuitum |
| 94 | 1880756 | 1881046 | + | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 95 | 4583370 | 4583660 | + | NZ_CP065640.1 | Serratia rubidaea |
| 96 | 1410761 | 1411051 | + | NZ_CP023422.1 | Janthinobacterium svalbardensis |
| 97 | 424446 | 424736 | - | NZ_CP017941.1 | Phyllobacterium zundukense |
| 98 | 620524 | 620814 | + | NZ_CP029210.1 | Aquabacterium olei |
| 99 | 4196976 | 4197266 | - | NZ_CP036401.1 | Massilia albidiflava |
| 100 | 1854267 | 1854557 | - | NZ_CP036401.1 | Massilia albidiflava |
| 101 | 4029900 | 4030190 | - | NZ_CP065435.1 | Halomonas sp. SS10-MC5 |
| 102 | 3784037 | 3784327 | + | NZ_AP022843.1 | Halomonas hydrothermalis |
| 103 | 5555855 | 5556139 | - | NZ_CP011491.1 | Mycolicibacterium vaccae 95051 |
| 104 | 880703 | 880981 | - | NC_021289.1 | Caballeronia insecticola |
| 105 | 1428159 | 1428449 | + | NZ_CP048832.1 | Janthinobacterium lividum |
| 106 | 1971020 | 1971298 | + | NZ_CP051298.1 | Alicycliphilus denitrificans |
| 107 | 2258225 | 2258503 | + | NZ_CP024941.1 | Paraburkholderia terricola |
| 108 | 1850561 | 1850851 | - | NC_014259.1 | Acinetobacter oleivorans DR1 |
| 109 | 1294750 | 1295040 | - | NZ_CP018139.1 | Halomonas aestuarii |
| 110 | 2470531 | 2470821 | + | NZ_CP068285.1 | Ralstonia syzygii subsp. celebesensis |
| 111 | 1788064 | 1788354 | - | NZ_CP053391.1 | Acinetobacter lactucae |
| 112 | 1661876 | 1662154 | + | NZ_CP021455.1 | Comamonas serinivorans |
| 113 | 2393250 | 2393540 | + | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 114 | 112000 | 112275 | + | NZ_CP062806.1 | Cupriavidus basilensis |
| 115 | 3366512 | 3366790 | - | NZ_AP022617.1 | Mycolicibacterium monacense |
| 116 | 1711629 | 1711919 | - | NZ_CP031416.1 | Gallaecimonas mangrovi |
| 117 | 7999 | 8277 | - | NZ_CP013254.1 | Kocuria flava |
| 118 | 2310099 | 2310335 | - | NZ_CP013254.1 | Kocuria flava |
| 119 | 150852 | 151142 | + | NZ_CP013236.1 | Collimonas pratensis |
| 120 | 4174257 | 4174541 | - | NZ_AP022563.1 | Mycolicibacterium duvalii |
| 121 | 1942671 | 1942955 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 122 | 2844324 | 2844614 | - | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 123 | 3654070 | 3654351 | - | NZ_CP047156.1 | Epidermidibacterium keratini |
| 124 | 4187563 | 4187847 | - | NZ_CP060714.1 | Diaphorobacter ruginosibacter |
| 125 | 4900119 | 4900409 | - | NZ_CP027723.1 | Pseudomonas orientalis |
| 126 | 175280 | 175570 | + | NZ_CP012943.1 | Ralstonia solanacearum |
| 127 | 2045342 | 2045629 | - | NC_013159.1 | Saccharomonospora viridis DSM 43017 |
| 128 | 2666644 | 2666919 | + | NC_009937.1 | Azorhizobium caulinodans ORS 571 |
| 129 | 3934172 | 3934462 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 130 | 2400792 | 2401082 | + | NZ_CP014870.1 | Pseudomonas silesiensis |
| 131 | 2443616 | 2443906 | + | NZ_LR134475.1 | Klebsiella aerogenes |
| 132 | 483730 | 484020 | + | NC_009427.1 | Novosphingobium aromaticivorans DSM 12444 |
| 133 | 221608 | 221886 | + | NZ_CP028901.1 | Algicoccus marinus |
| 134 | 3405728 | 3406012 | - | NZ_CP031142.1 | Saccharopolyspora pogona |
| 135 | 2662563 | 2662853 | - | NC_015968.1 | Enterobacter soli |
| 136 | 1540264 | 1540554 | - | NC_007969.1 | Psychrobacter cryohalolentis K5 |
| 137 | 4374851 | 4375135 | - | NC_015138.1 | Acidovorax avenae subsp. avenae ATCC 19860 |
| 138 | 5760919 | 5761209 | - | NZ_CP012400.2 | Pseudomonas yamanorum |
| 139 | 4364925 | 4365209 | - | NC_008752.1 | Acidovorax citrulli AAC00-1 |
| 140 | 5472347 | 5472631 | + | NZ_CP011530.1 | Mycobacteroides immunogenum |
| 141 | 2480800 | 2481090 | + | NZ_CP054254.1 | Klebsiella variicola |
| 142 | 1965478 | 1965759 | + | NZ_CP045845.1 | Kluyvera intermedia |
| 143 | 1225505 | 1225780 | - | NZ_CP009896.1 | Pimelobacter simplex |
| 144 | 2605797 | 2606087 | - | NZ_CP012676.1 | Pseudomonas versuta |
| 145 | 4147696 | 4147986 | - | NZ_CP051487.1 | Pseudomonas umsongensis |
| 146 | 2538228 | 2538518 | - | NC_014006.1 | Sphingobium japonicum UT26S |
| 147 | 768971 | 769261 | + | NZ_CP009978.1 | Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 |
| 148 | 1815215 | 1815499 | - | NZ_CP049135.1 | Paraburkholderia tropica |
| 149 | 5426185 | 5426475 | - | NZ_CP027756.1 | Pseudomonas synxantha |
| 150 | 2004985 | 2005275 | + | NZ_LS398110.1 | Bradyrhizobium vignae |
| 151 | 4911137 | 4911427 | + | NC_009142.1 | Saccharopolyspora erythraea NRRL 2338 |
| 152 | 4426844 | 4427119 | + | NZ_CP053986.1 | Achromobacter denitrificans |
| 153 | 5102038 | 5102328 | - | NZ_CP023272.1 | Pseudomonas lurida |
| 154 | 1242178 | 1242441 | + | NZ_CP015453.1 | Dietzia psychralcaliphila |
| 155 | 1292533 | 1292808 | - | NZ_CP022579.1 | Oryzomicrobium terrae |
| 156 | 61870 | 62160 | + | NZ_CP035511.1 | Haematobacter massiliensis |
| 157 | 3731961 | 3732251 | + | NZ_CP044543.1 | Bradyrhizobium betae |
| 158 | 6760978 | 6761268 | + | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 159 | 1006638 | 1006928 | - | NC_010623.1 | Paraburkholderia phymatum STM815 |
| 160 | 1265390 | 1265653 | + | NZ_CP015449.1 | Dietzia lutea |
| 161 | 3494200 | 3494436 | - | NZ_CP015449.1 | Dietzia lutea |
| 162 | 1865942 | 1866217 | + | NZ_LR134302.1 | Achromobacter spanius |
| 163 | 3096250 | 3096513 | + | NZ_LS483468.1 | Rhodococcus coprophilus |
| 164 | 5143001 | 5143291 | - | NZ_CP010896.1 | Pseudomonas simiae |
| 165 | 1680667 | 1680957 | + | NZ_CP015959.1 | Paraburkholderia caribensis |
| 166 | 602393 | 602674 | + | NZ_CP015163.1 | Amycolatopsis albispora |
| 167 | 573666 | 573953 | - | NZ_AP022574.1 | Mycolicibacterium psychrotolerans |
| 168 | 3192501 | 3192791 | + | NZ_CP022989.1 | Paraburkholderia aromaticivorans |
| 169 | 2598913 | 2599203 | - | NC_007951.1 | Paraburkholderia xenovorans LB400 |
| 170 | 1718104 | 1718382 | + | NZ_CP041146.1 | Nocardioides humi |
| 171 | 1336910 | 1337185 | - | NZ_AP018920.1 | Pseudonocardia autotrophica |
| 172 | 3025019 | 3025309 | - | NZ_CP050508.1 | Raoultella terrigena |
| 173 | 873739 | 874029 | + | NZ_CP066075.1 | Paraburkholderia ginsengisoli |
| 174 | 73071 | 73361 | - | NZ_CP031467.1 | Paraburkholderia caffeinilytica |
| 175 | 5903039 | 5903314 | + | NZ_CP038034.1 | Achromobacter insolitus |
| 176 | 6830560 | 6830850 | - | NZ_CP019038.1 | Massilia putida |
| 177 | 1746341 | 1746631 | - | NZ_CP019038.1 | Massilia putida |
| 178 | 6432673 | 6432963 | - | NZ_CP019038.1 | Massilia putida |
| 179 | 747915 | 748205 | + | NZ_CP034910.1 | Ensifer alkalisoli |
| 180 | 4086024 | 4086305 | + | NZ_CP008953.1 | Amycolatopsis japonica |
| 181 | 4221376 | 4221651 | + | NZ_CP022295.1 | Nocardioides aromaticivorans |
| 182 | 1512375 | 1512659 | + | NZ_CP046910.1 | Paraburkholderia acidiphila |
| 183 | 406872 | 407150 | - | NZ_CP038256.1 | Microbacterium sediminis |
| 184 | 1393047 | 1393289 | + | NZ_CP045929.1 | Saccharopolyspora coralli |
| 185 | 354818 | 355096 | + | NZ_CP044115.1 | Roseomonas mucosa |
| 186 | 1849379 | 1849669 | - | NZ_CP023068.1 | Ensifer sojae CCBAU 05684 |
| 187 | 284102 | 284392 | - | NZ_CP029834.1 | Azospirillum ramasamyi |
| 188 | 4547692 | 4547982 | - | NZ_CP061079.1 | Pseudomonas chlororaphis |
| 189 | 3807108 | 3807398 | - | NZ_LT556085.1 | Citrobacter amalonaticus |
| 190 | 4381105 | 4381386 | + | NC_021252.1 | Amycolatopsis keratiniphila |
| 191 | 3146900 | 3147190 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 192 | 1380355 | 1380651 | - | NZ_CP048106.1 | Pontibacter pudoricolor |
| 193 | 508135 | 508425 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 194 | 362386 | 362670 | - | NC_010505.1 | Methylobacterium radiotolerans JCM 2831 |
| 195 | 2688589 | 2688879 | - | NZ_CP041247.1 | Raoultella electrica |
| 196 | 4406101 | 4406391 | - | NZ_LS999205.1 | Pseudomonas protegens CHA0 |
| 197 | 3305615 | 3305905 | + | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 198 | 5792094 | 5792384 | - | NZ_CP018420.1 | Pseudomonas veronii |
| 199 | 3225156 | 3225431 | + | NZ_CP065682.1 | Brevibacterium casei |
| 200 | 1270051 | 1270341 | + | NZ_CP034179.1 | Caenibius tardaugens NBRC 16725 |
| 201 | 2979429 | 2979719 | - | NZ_CP062158.2 | Pseudomonas lundensis |
| 202 | 400679 | 400954 | - | NC_018518.1 | Bordetella pertussis 18323 |
| 203 | 1357962 | 1358255 | - | NC_013757.1 | Geodermatophilus obscurus DSM 43160 |
| 204 | 3085599 | 3085889 | - | NZ_CP015839.1 | Marinobacterium aestuarii |
| 205 | 1913640 | 1913930 | + | NZ_CP009728.1 | Burkholderia mallei |
| 206 | 111032 | 111322 | - | NZ_CP008782.1 | Burkholderia pseudomallei |
| 207 | 4512068 | 4512343 | - | NZ_AP019378.1 | Bordetella parapertussis |
| 208 | 4739163 | 4739438 | + | NZ_LR134326.1 | Bordetella bronchiseptica |
| 209 | 380725 | 381015 | - | NZ_CP042262.1 | Qingshengfaniella alkalisoli |
| 210 | 930067 | 930357 | - | NZ_CP020738.1 | Paraburkholderia acidophila |
| 211 | 4927649 | 4927915 | - | NZ_CP029146.1 | Rhodococcus ruber |
| 212 | 315344 | 315628 | - | NZ_CP066076.1 | Paraburkholderia ginsengisoli |
| 213 | 821103 | 821393 | - | NZ_CP013452.1 | Burkholderia cenocepacia |
| 214 | 80468 | 80758 | + | NZ_CP060036.1 | Sphingobium fuliginis |
| 215 | 403757 | 404041 | + | NZ_CP011258.1 | Ralstonia mannitolilytica |
| 216 | 5573665 | 5573925 | - | NZ_AP023172.1 | Rhodococcus qingshengii |
| 217 | 5479811 | 5480101 | + | NZ_CP056030.1 | Pseudomonas eucalypticola |
| 218 | 1163014 | 1163295 | + | NZ_CP021112.1 | Pseudorhodoplanes sinuspersici |
| 219 | 187670 | 187930 | - | NZ_CP022208.1 | Rhodococcus pyridinivorans |
| 220 | 665798 | 666088 | - | NZ_CP013416.1 | Burkholderia ubonensis |
| 221 | 5250 | 5540 | + | NZ_CP060052.1 | Croceicoccus marinus |
| 222 | 3089251 | 3089541 | + | NZ_CP060052.1 | Croceicoccus marinus |
| 223 | 2907616 | 2907906 | + | NZ_AP022642.1 | Pseudomonas otitidis |
| 224 | 4004365 | 4004643 | - | NC_015276.1 | Marinomonas mediterranea MMB-1 |
| 225 | 4984494 | 4984754 | - | NZ_LT906450.1 | Rhodococcus rhodochrous |
| 226 | 2910820 | 2911110 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 227 | 1689784 | 1690074 | + | NZ_CP061205.1 | Kordiimonas pumila |
| 228 | 4526840 | 4527130 | - | NZ_AP014862.1 | Pseudomonas furukawaii |
| 229 | 4355699 | 4355989 | + | NZ_CP026047.1 | Raoultella planticola |
| 230 | 1304769 | 1305029 | + | NZ_CP015961.1 | Dietzia timorensis |
| 231 | 726110 | 726400 | - | NZ_CP013400.1 | Burkholderia seminalis |
| 232 | 2660824 | 2661114 | + | NC_007511.1 | Burkholderia lata |
| 233 | 1415298 | 1415588 | + | NZ_CP043311.1 | Pseudomonas lalkuanensis |
| 234 | 3139470 | 3139760 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 235 | 207324 | 207614 | - | NZ_CP020083.1 | Blastomonas fulva |
| 236 | 2538020 | 2538310 | + | NZ_CP014158.1 | Pseudomonas citronellolis |
| 237 | 3826360 | 3826650 | - | NZ_CP049044.1 | Pseudomonas psychrophila |
| 238 | 4478597 | 4478881 | - | NZ_CP043046.1 | Pigmentiphaga aceris |
| 239 | 3711701 | 3711979 | + | NC_014550.1 | Glutamicibacter arilaitensis Re117 |
| 240 | 1814204 | 1814494 | + | NZ_CP045236.1 | Burkholderia cepacia |
| 241 | 832507 | 832797 | + | NZ_CP013124.1 | Pseudomonas mendocina S5.2 |
| 242 | 1016116 | 1016406 | - | NZ_CP009556.1 | Burkholderia oklahomensis C6786 |
| 243 | 643092 | 643382 | - | NZ_CP013461.1 | Burkholderia stagnalis |
| 244 | 2485287 | 2485577 | + | NZ_CP048833.1 | Pseudomonas multiresinivorans |
| 245 | 3386289 | 3386564 | - | NZ_CP043146.1 | Bordetella holmesii |
| 246 | 2025977 | 2026267 | - | NZ_CP014205.2 | Pseudomonas glycinae |
| 247 | 573189 | 573479 | - | NC_007650.1 | Burkholderia thailandensis E264 |
| 248 | 2868512 | 2868802 | + | NZ_CP062253.1 | Pseudomonas gozinkensis |
| 249 | 2503609 | 2503899 | + | NZ_AP019312.1 | Chromobacterium haemolyticum |
| 250 | 817005 | 817280 | - | NC_015312.1 | Pseudonocardia dioxanivorans CB1190 |
| 251 | 6419937 | 6420224 | - | NC_015312.1 | Pseudonocardia dioxanivorans CB1190 |
| 252 | 3305071 | 3305355 | + | NC_015312.1 | Pseudonocardia dioxanivorans CB1190 |
| 253 | 1251412 | 1251687 | + | NZ_CP021395.1 | Bordetella hinzii |
| 254 | 3005657 | 3005947 | - | NZ_CP046621.1 | Pseudomonas alkylphenolica |
| 255 | 112513 | 112803 | - | NZ_CP046621.1 | Pseudomonas alkylphenolica |
| 256 | 317207 | 317497 | + | NZ_CP011504.1 | Burkholderia pyrrocinia |
| 257 | 319292 | 319567 | - | NC_010645.1 | Bordetella avium 197N |
| 258 | 4136385 | 4136660 | + | NZ_CP016440.1 | Bordetella pseudohinzii |
| 259 | 2825636 | 2825926 | - | NC_002516.2 | Pseudomonas aeruginosa PAO1 |
| 260 | 1301359 | 1301598 | - | NZ_CP019066.1 | Tsukamurella tyrosinosolvens |
| 261 | 2805075 | 2805365 | + | NZ_CP062252.1 | Pseudomonas allokribbensis |
| 262 | 3355331 | 3355621 | - | NC_008027.1 | Pseudomonas entomophila L48 |
| 263 | 2257618 | 2257908 | + | NZ_CP047698.1 | Pseudomonas knackmussii |
| 264 | 2926002 | 2926292 | + | NZ_LR588407.1 | Brevundimonas vancanneytii |
| 265 | 1486306 | 1486593 | - | NZ_CP011930.1 | Herbaspirillum seropedicae |
| 266 | 2407081 | 2407371 | + | NC_021505.1 | Pseudomonas putida NBRC 14164 |
| 267 | 2692362 | 2692655 | - | NZ_AP017369.1 | Corynebacterium suranareeae |
| 268 | 2418809 | 2419099 | + | NZ_CP022562.1 | Pseudomonas monteilii |
| 269 | 2720275 | 2720568 | + | NZ_CP009251.1 | Corynebacterium stationis |
| 270 | 58610 | 58900 | + | NZ_CP031146.1 | Pseudomonas plecoglossicida |
| 271 | 2257548 | 2257841 | - | NZ_CP009220.1 | Corynebacterium deserti GIMN1.010 |
| 272 | 2712318 | 2712614 | + | NZ_LR698967.1 | Corynebacterium ammoniagenes |
| 273 | 2469703 | 2469981 | + | NC_011894.1 | Methylobacterium nodulans ORS 2060 |
| 274 | 5275238 | 5275528 | - | NZ_CP041185.1 | Janthinobacterium tructae |
| 275 | 380793 | 381071 | + | NZ_CP029830.1 | Azospirillum ramasamyi |
| 276 | 115597 | 115887 | - | NZ_CP071706.1 | Pseudomonas donghuensis |
| 277 | 363070 | 363351 | + | NZ_CP011853.1 | Gordonia phthalatica |
| 278 | 1440158 | 1440445 | - | NZ_CP037993.1 | Herbaspirillum huttiense |
| 279 | 2293394 | 2293687 | - | NZ_CP015622.1 | Corynebacterium crudilactis |
| 280 | 3474360 | 3474638 | + | NZ_CP033081.1 | Glutamicibacter nicotianae |
| 281 | 2447363 | 2447656 | - | NC_004369.1 | Corynebacterium efficiens YS-314 |
| 282 | 435580 | 435891 | - | NZ_CP035504.1 | Kocuria indica |
| 283 | 1714573 | 1714866 | + | NZ_CP051131.1 | Parasphingopyxis algicola |
| 284 | 1944822 | 1945100 | + | NZ_CP029553.1 | Methylobacterium terrae |
| 285 | 729528 | 729818 | - | NZ_CP013403.1 | Burkholderia metallica |
| 286 | 1725691 | 1725981 | + | NZ_CP009793.1 | Burkholderia dolosa AU0158 |
| 287 | 1455573 | 1455857 | - | NZ_CP054624.1 | Cupriavidus gilardii |
| 288 | 1044111 | 1044401 | - | NZ_CP011545.1 | Corynebacterium testudinoris |
| 289 | 1787025 | 1787309 | - | NZ_CP039288.1 | Cupriavidus necator H16 |
| 290 | 1325193 | 1325480 | - | NZ_CP013737.1 | Herbaspirillum rubrisubalbicans M1 |
| 291 | 2285233 | 2285517 | + | NZ_CP015235.1 | Rhodococcus fascians D188 |
| 292 | 2179459 | 2179752 | - | NC_020506.1 | Corynebacterium callunae DSM 20147 |
| 293 | 1253236 | 1253529 | - | NZ_CP042429.1 | Corynebacterium nuruki S6-4 |
| 294 | 1291252 | 1291542 | - | NC_020302.1 | Corynebacterium halotolerans YIM 70093 = DSM 44683 |
| 295 | 2220902 | 2221198 | - | NC_021915.1 | Corynebacterium maris DSM 45190 |
| 296 | 1415235 | 1415471 | - | NZ_CP012507.1 | Kocuria palustris |
| 297 | 739620 | 739904 | + | NZ_CP042266.1 | Streptomyces qinzhouensis |
| 298 | 3074129 | 3074407 | + | NZ_CP016353.1 | Prauserella marina |
| 299 | 420196 | 420486 | + | NZ_LT906473.1 | Corynebacterium cystitidis |
| 300 | 2296278 | 2296565 | - | NZ_CP006842.1 | Corynebacterium glyciniphilum AJ 3170 |
| 301 | 2407221 | 2407511 | + | NZ_LT906467.1 | Corynebacterium imitans |
| 302 | 729901 | 730185 | + | NZ_CP046914.1 | Paraburkholderia acidisoli |
| 303 | 932006 | 932290 | + | NZ_CP020700.1 | Streptomyces tsukubensis |
| 304 | 11568128 | 11568406 | - | NC_016582.1 | Streptomyces bingchenggensis BCW-1 |
| 305 | 1501394 | 1501684 | + | NZ_CP026947.1 | Corynebacterium yudongzhengii |
| 306 | 2115890 | 2116183 | - | NZ_CP006764.1 | Corynebacterium doosanense CAU 212 = DSM 45436 |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP046912.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00775.23 | 0.83 | 229 | 66.0 | same-strand | Dioxygenase |
| 2 | PF04444.16 | 0.83 | 229 | 65.5 | same-strand | Catechol dioxygenase N terminus |
| 3 | PF13378.8 | 0.88 | 241 | 29 | same-strand | Enolase C-terminal domain-like |
| 4 | PF02746.18 | 0.87 | 240 | 29.0 | same-strand | Mandelate racemase / muconate lactonizing enzyme, N-terminal domain |
| 5 | PF03466.22 | 0.65 | 180 | 1327.0 | opposite-strand | LysR substrate binding domain |
| 6 | PF00126.29 | 0.65 | 179 | 1323.5 | opposite-strand | Bacterial regulatory helix-turn-helix protein, lysR family |
++ More..