Result : A2SBV7
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (Asp/Glu-ADT subunit C) (EC 6.3.5.-) |
| NCBI Accession ID | CP000555.1 |
| Organism | Methylibium petroleiphilum (strain ATCC BAA-1232 / LMG 22953 / PM1) |
| Left | 80485 |
| Right | 80784 |
| Strand | + |
| Nucleotide Sequence | ATGGCCCTGACCCCCACCGACGTGAGCCGCATCGCCCTGCTGGCCCGGCTCGAACTCAGCGAGGCGGAGCAGTCCGCGATGCTCAGCCAGCTGAACGGCTTCTTCGACATCGTCGAGCGCATGCGCGCCGTCGACACCACCGGTGTCGCGCCGCTGTACACGCCGCTGTCGGCGGTGCAGGAAGTCGCGCTGCGGCTGCGCGAAGACGCGGTCACCGAGGTCGACCAGCGCCAGGCCAACCAACTCAGCGCACCGGCCGTCGAGGCGGGGCTGTACCTCGTGCCCAAGGTGATCGAATGA |
| Sequence | MALTPTDVSRIALLARLELSEAEQSAMLSQLNGFFDIVERMRAVDTTGVAPLYTPLSAVQEVALRLREDAVTEVDQRQANQLSAPAVEAGLYLVPKVIE |
| Source of smORF | Swiss-Prot |
| Function | Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln). {ECO:0000255|HAMAP-Rule:MF_00122}. |
| Pubmed ID | 17158667 |
| Domain | CDD:412411 |
| Functional Category | Others |
| Uniprot ID | A2SBV7 |
| ORF Length (Amino Acid) | 99 |
++ More..
| Conservation Analysis |
No. of Species: 260
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 80485 | 80784 | + | NC_008825.1 | Methylibium petroleiphilum PM1 |
| 2 | 547854 | 548153 | + | NC_010524.1 | Leptothrix cholodnii SP-6 |
| 3 | 3264868 | 3265167 | - | NZ_CP035708.1 | Sphaerotilus natans subsp. sulfidivorans |
| 4 | 134032 | 134331 | - | NZ_CP064338.1 | Schlegelella thermodepolymerans |
| 5 | 5526963 | 5527262 | + | NZ_CP013729.1 | Roseateles depolymerans |
| 6 | 3946909 | 3947208 | + | NZ_CP040709.1 | Inhella inkyongensis |
| 7 | 3570781 | 3571080 | + | NZ_CP029210.1 | Aquabacterium olei |
| 8 | 815785 | 816084 | + | NZ_CP022423.1 | Vitreoscilla filiformis |
| 9 | 248681 | 248980 | - | NZ_CP024645.1 | Rhizobacter gummiphilus |
| 10 | 245582 | 245881 | - | NZ_CP021359.1 | Acidovorax carolinensis |
| 11 | 355894 | 356193 | - | NZ_CP051298.1 | Alicycliphilus denitrificans |
| 12 | 325418 | 325717 | - | NC_008752.1 | Acidovorax citrulli AAC00-1 |
| 13 | 394087 | 394386 | - | NC_015138.1 | Acidovorax avenae subsp. avenae ATCC 19860 |
| 14 | 2990927 | 2991226 | + | NZ_CP016278.1 | Diaphorobacter polyhydroxybutyrativorans |
| 15 | 1796250 | 1796549 | + | NC_008786.1 | Verminephrobacter eiseniae EF01-2 |
| 16 | 2978138 | 2978437 | + | NZ_CP060790.1 | Acidovorax monticola |
| 17 | 5163712 | 5164011 | - | NZ_CP065748.1 | Delftia lacustris |
| 18 | 5138731 | 5139030 | - | NZ_CP017420.1 | Delftia tsuruhatensis |
| 19 | 4382987 | 4383286 | + | NC_007908.1 | Rhodoferax ferrireducens T118 |
| 20 | 387159 | 387458 | + | NC_015677.1 | Ramlibacter tataouinensis TTB310 |
| 21 | 349908 | 350207 | - | NZ_CP021455.1 | Comamonas serinivorans |
| 22 | 3901579 | 3901878 | + | NZ_CP054840.1 | Acidovorax antarcticus |
| 23 | 122326 | 122625 | - | NZ_CP060714.1 | Diaphorobacter ruginosibacter |
| 24 | 231019 | 231318 | + | NZ_CP043575.1 | Comamonas koreensis |
| 25 | 458775 | 459074 | - | NZ_CP027666.1 | Ottowia oryzae |
| 26 | 292735 | 293034 | - | NZ_CP019236.1 | Rhodoferax koreense |
| 27 | 277974 | 278273 | - | NZ_CP019239.1 | Rhodoferax saidenbachensis |
| 28 | 4226127 | 4226426 | + | NZ_CP035503.1 | Rhodoferax sediminis |
| 29 | 2538410 | 2538709 | + | NZ_CP060783.1 | Diaphorobacter aerolatus |
| 30 | 317092 | 317391 | + | NZ_CP037867.1 | Hydrogenophaga pseudoflava |
| 31 | 1204991 | 1205290 | - | NZ_CP011503.1 | Burkholderia pyrrocinia |
| 32 | 3521437 | 3521736 | - | NZ_CP013450.1 | Burkholderia cenocepacia |
| 33 | 3626820 | 3627119 | - | NC_007510.1 | Burkholderia lata |
| 34 | 2000788 | 2001087 | - | NZ_CP015958.1 | Paraburkholderia caribensis |
| 35 | 211099 | 211398 | + | NZ_CP011807.3 | Pandoraea faecigallinarum |
| 36 | 3439645 | 3439944 | - | NZ_CP013398.1 | Burkholderia seminalis |
| 37 | 3487689 | 3487988 | - | NZ_CP013401.1 | Burkholderia metallica |
| 38 | 45952 | 46251 | + | NZ_CP049134.1 | Paraburkholderia tropica |
| 39 | 194420 | 194719 | + | NZ_CP011253.3 | Pandoraea oxalativorans |
| 40 | 223466 | 223765 | + | NZ_LT906435.1 | Pandoraea sputorum |
| 41 | 3619607 | 3619906 | - | NZ_CP045235.1 | Burkholderia cepacia |
| 42 | 300854 | 301153 | + | NZ_CP017476.1 | Hydrogenophaga crassostreae |
| 43 | 2706074 | 2706373 | - | NC_014722.1 | Mycetohabitans rhizoxinica HKI 454 |
| 44 | 43890 | 44189 | + | NZ_CP029640.1 | Paraburkholderia dokdonella |
| 45 | 561614 | 561913 | - | NZ_CP027792.1 | Pulveribacter suum |
| 46 | 1084240 | 1084539 | - | NZ_CP022989.1 | Paraburkholderia aromaticivorans |
| 47 | 82093 | 82392 | + | NC_007951.1 | Paraburkholderia xenovorans LB400 |
| 48 | 85402 | 85701 | + | NZ_CP024941.1 | Paraburkholderia terricola |
| 49 | 165213 | 165512 | + | NZ_CP024934.1 | Paraburkholderia graminis |
| 50 | 1072287 | 1072586 | + | NZ_CP020121.1 | Comamonas kerstersii |
| 51 | 3371212 | 3371511 | + | NZ_CP009795.1 | Burkholderia dolosa AU0158 |
| 52 | 4330425 | 4330724 | - | NZ_CP011568.3 | Pandoraea thiooxydans |
| 53 | 3115314 | 3115613 | - | NZ_CP047650.1 | Xylophilus rhododendri |
| 54 | 2285354 | 2285653 | + | NZ_CP031467.1 | Paraburkholderia caffeinilytica |
| 55 | 36014 | 36313 | - | NZ_CP009832.1 | Burkholderia multivorans ATCC BAA-247 |
| 56 | 3874821 | 3875120 | - | NZ_CP013414.1 | Burkholderia ubonensis |
| 57 | 2521752 | 2522051 | - | NZ_CP066075.1 | Paraburkholderia ginsengisoli |
| 58 | 3731223 | 3731522 | - | NZ_CP019240.1 | Rhodoferax antarcticus |
| 59 | 46566 | 46865 | + | NZ_CP046913.1 | Paraburkholderia acidisoli |
| 60 | 227286 | 227585 | + | NZ_CP013480.3 | Pandoraea norimbergensis |
| 61 | 54871 | 55170 | + | NZ_CP046909.1 | Paraburkholderia acidiphila |
| 62 | 3642070 | 3642369 | - | NZ_CP013459.1 | Burkholderia stagnalis |
| 63 | 3414711 | 3415010 | - | NZ_CP009727.1 | Burkholderia mallei |
| 64 | 1570861 | 1571160 | - | NZ_CP008781.1 | Burkholderia pseudomallei |
| 65 | 3676669 | 3676968 | - | NZ_CP020737.1 | Paraburkholderia acidophila |
| 66 | 2767790 | 2768089 | - | NZ_CP017561.1 | Paraburkholderia sprentiae WSM5005 |
| 67 | 1607752 | 1608051 | - | NZ_CP009555.1 | Burkholderia oklahomensis C6786 |
| 68 | 53010 | 53309 | + | NZ_CP026111.1 | Paraburkholderia terrae |
| 69 | 352950 | 353249 | + | NC_010681.1 | Paraburkholderia phytofirmans PsJN |
| 70 | 204365 | 204664 | + | NC_023018.2 | Pandoraea pnomenusa |
| 71 | 61712 | 62011 | + | NC_010622.1 | Paraburkholderia phymatum STM815 |
| 72 | 75033 | 75332 | - | NZ_CP032519.1 | Cupriavidus oxalaticus |
| 73 | 4107772 | 4108071 | - | NZ_CP002580.1 | Burkholderia plantarii |
| 74 | 556844 | 557143 | + | NZ_CP017754.1 | Cupriavidus malaysiensis |
| 75 | 177992 | 178291 | + | NC_007651.1 | Burkholderia thailandensis E264 |
| 76 | 203498 | 203797 | + | NZ_CP010310.2 | Pandoraea pulmonicola |
| 77 | 240103 | 240402 | + | NZ_CP047385.1 | Pandoraea fibrosis |
| 78 | 2200484 | 2200783 | - | NZ_CP035900.1 | Burkholderia glumae |
| 79 | 5941068 | 5941367 | + | NZ_CP036401.1 | Massilia albidiflava |
| 80 | 51945 | 52244 | + | NC_021287.1 | Caballeronia insecticola |
| 81 | 5297578 | 5297877 | - | NZ_CP013481.2 | Pandoraea apista |
| 82 | 37198 | 37497 | + | NZ_CP054626.1 | Cupriavidus gilardii |
| 83 | 1932860 | 1933159 | + | NZ_CP011257.1 | Ralstonia mannitolilytica |
| 84 | 183921 | 184220 | - | NC_008781.1 | Polaromonas naphthalenivorans CJ2 |
| 85 | 250181 | 250480 | + | NZ_CP010897.2 | Pandoraea vervacti |
| 86 | 141183 | 141482 | - | NZ_CP051461.1 | Polaromonas vacuolata |
| 87 | 5890565 | 5890864 | - | NZ_CP040017.1 | Massilia umbonata |
| 88 | 2159446 | 2159745 | - | NZ_CP012943.1 | Ralstonia solanacearum |
| 89 | 125886 | 126185 | - | NZ_CP039287.1 | Cupriavidus necator H16 |
| 90 | 1693798 | 1694097 | + | NZ_CP027669.1 | Simplicispira suum |
| 91 | 457601 | 457900 | - | NZ_CP068285.1 | Ralstonia syzygii subsp. celebesensis |
| 92 | 3847775 | 3848074 | + | NZ_CP016022.1 | Ralstonia insidiosa |
| 93 | 4308631 | 4308933 | + | NZ_CP013235.1 | Collimonas arenae |
| 94 | 197851 | 198150 | + | NZ_CP062803.1 | Cupriavidus basilensis |
| 95 | 5242013 | 5242315 | + | NZ_CP013232.1 | Collimonas fungivorans |
| 96 | 5501358 | 5501660 | - | NZ_CP037993.1 | Herbaspirillum huttiense |
| 97 | 1428447 | 1428746 | - | NZ_CP028324.1 | Massilia armeniaca |
| 98 | 5201853 | 5202155 | + | NZ_CP013236.1 | Collimonas pratensis |
| 99 | 5023820 | 5024122 | + | NZ_HG322949.1 | Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 |
| 100 | 1775030 | 1775338 | - | NZ_CP047165.1 | Pelistega ratti |
| 101 | 245287 | 245595 | - | NZ_CP009238.1 | Basilea psittacipulmonis DSM 24701 |
| 102 | 1546706 | 1547008 | + | NZ_CP034464.1 | Undibacterium parvum |
| 103 | 5424926 | 5425228 | - | NZ_CP013737.1 | Herbaspirillum rubrisubalbicans M1 |
| 104 | 4686107 | 4686406 | - | NZ_CP046904.1 | Massilia flava |
| 105 | 5346436 | 5346738 | - | NZ_CP011930.1 | Herbaspirillum seropedicae |
| 106 | 68664 | 68951 | + | NZ_CP029331.1 | Thauera hydrothermalis |
| 107 | 1215525 | 1215812 | - | NZ_CP007446.1 | Snodgrassella alvi wkB2 |
| 108 | 2977456 | 2977743 | + | NZ_CP014646.1 | Thauera humireducens |
| 109 | 4854265 | 4854564 | - | NZ_CP019038.1 | Massilia putida |
| 110 | 990956 | 991264 | - | NC_017964.1 | Advenella kashmirensis WT001 |
| 111 | 2742706 | 2743005 | + | NZ_AP018150.1 | Mycoavidus cysteinexigens |
| 112 | 2017905 | 2018192 | + | NZ_CP029495.1 | Chromobacterium phragmitis |
| 113 | 3799869 | 3800171 | + | NZ_CP018845.1 | Herbaspirillum robiniae |
| 114 | 857058 | 857360 | - | NZ_CP018787.1 | Oxalobacter formigenes |
| 115 | 268986 | 269273 | + | NZ_AP019312.1 | Chromobacterium haemolyticum |
| 116 | 1018631 | 1018939 | - | NZ_CP003915.1 | Advenella mimigardefordensis DPN7 |
| 117 | 2020867 | 2021166 | - | NZ_CP020046.1 | Thiomonas intermedia |
| 118 | 4697160 | 4697447 | - | NC_005085.1 | Chromobacterium violaceum ATCC 12472 |
| 119 | 3370403 | 3370690 | + | NZ_CP017707.1 | Chromobacterium vaccinii |
| 120 | 6042482 | 6042790 | + | NZ_CP043046.1 | Pigmentiphaga aceris |
| 121 | 196853 | 197152 | + | NZ_CP031124.1 | Ephemeroptericola cinctiostellae |
| 122 | 1867310 | 1867609 | + | NZ_AP014569.1 | Serpentinomonas mccroryi |
| 123 | 469194 | 469481 | - | NZ_LR134378.1 | Lautropia mirabilis |
| 124 | 3910374 | 3910661 | + | NZ_CP043473.1 | Chromobacterium paludis |
| 125 | 1378074 | 1378361 | + | NZ_CP039731.1 | Aquitalea aquatilis |
| 126 | 4150971 | 4151258 | - | NZ_CP047241.1 | Aquitalea denitrificans |
| 127 | 1809764 | 1810051 | - | NC_006513.1 | Aromatoleum aromaticum EbN1 |
| 128 | 2665119 | 2665406 | - | NC_012969.1 | Methylovorus glucosetrophus SIP3-4 |
| 129 | 2647072 | 2647359 | + | NZ_AP018721.1 | Sulfuritortus calidifontis |
| 130 | 1958486 | 1958773 | - | NZ_CP059467.1 | Aromatoleum bremense |
| 131 | 1082188 | 1082490 | - | NZ_CP023422.1 | Janthinobacterium svalbardensis |
| 132 | 4955034 | 4955336 | - | NZ_CP041185.1 | Janthinobacterium tructae |
| 133 | 2595055 | 2595342 | + | NZ_CP059560.1 | Aromatoleum petrolei |
| 134 | 205899 | 206186 | - | NZ_CP016210.1 | Azoarcus olearius |
| 135 | 1665433 | 1665723 | + | NZ_CP059563.1 | Conchiformibius steedae |
| 136 | 1095815 | 1096117 | - | NZ_CP048832.1 | Janthinobacterium lividum |
| 137 | 1517332 | 1517634 | - | NZ_CP024608.1 | Massilia violaceinigra |
| 138 | 2704169 | 2704456 | - | NZ_AP018738.1 | Ferriphaselus amnicola |
| 139 | 372655 | 372963 | - | NZ_CP043146.1 | Bordetella holmesii |
| 140 | 156802 | 157089 | - | NZ_CP028339.1 | Thauera aromatica K172 |
| 141 | 3661539 | 3661826 | - | NZ_AP022853.1 | Sulfurimicrobium lacus |
| 142 | 5013671 | 5013961 | + | NC_002516.2 | Pseudomonas aeruginosa PAO1 |
| 143 | 1471471 | 1471758 | - | NZ_CP012371.1 | Nitrosospira briensis C-128 |
| 144 | 346251 | 346538 | + | NC_007614.1 | Nitrosospira multiformis ATCC 25196 |
| 145 | 1318688 | 1318978 | + | NZ_CP059571.1 | Neisseria bacilliformis |
| 146 | 836794 | 837081 | + | NZ_CP021106.3 | Nitrosospira lacus |
| 147 | 3451781 | 3452089 | + | NC_010645.1 | Bordetella avium 197N |
| 148 | 2250030 | 2250317 | + | NC_004757.1 | Nitrosomonas europaea ATCC 19718 |
| 149 | 125656 | 125943 | + | NZ_AP021884.1 | Sulfuriferula plumbiphila |
| 150 | 151363 | 151650 | - | NZ_CP018839.1 | Thauera chlorobenzoica |
| 151 | 2668308 | 2668595 | - | NC_007947.1 | Methylobacillus flagellatus KT |
| 152 | 793318 | 793605 | - | NZ_CP064781.1 | Azospira restricta |
| 153 | 1984388 | 1984696 | - | NZ_CP021395.1 | Bordetella hinzii |
| 154 | 953886 | 954173 | + | NZ_CP041335.1 | Chitinolyticbacter meiyuanensis |
| 155 | 128913 | 129200 | - | NZ_CP022579.1 | Oryzomicrobium terrae |
| 156 | 2201632 | 2201940 | + | NZ_LR134302.1 | Achromobacter spanius |
| 157 | 3625675 | 3625983 | - | NZ_CP028901.1 | Algicoccus marinus |
| 158 | 2092316 | 2092609 | - | NC_009379.1 | Polynucleobacter asymbioticus QLW-P1DMWA-1 |
| 159 | 1557202 | 1557453 | - | NZ_CP030086.1 | Polynucleobacter paneuropaeus |
| 160 | 1111304 | 1111591 | - | NZ_CP011835.1 | Azotobacter chroococcum |
| 161 | 2571403 | 2571690 | - | NZ_AP018724.1 | Sulfurivermis fontis |
| 162 | 463657 | 463965 | - | NC_010170.1 | Bordetella petrii |
| 163 | 5363100 | 5363408 | + | NZ_CP016171.1 | Bordetella bronchialis |
| 164 | 3110887 | 3111174 | + | NZ_CP025682.1 | Azoarcus pumilus |
| 165 | 1229841 | 1230128 | - | NC_012560.1 | Azotobacter vinelandii DJ |
| 166 | 1973862 | 1974155 | - | NZ_CP007501.1 | Polynucleobacter duraquae |
| 167 | 214109 | 214396 | + | NZ_AP014879.1 | Sulfuricaulis limicola |
| 168 | 5232846 | 5233154 | + | NZ_CP016172.1 | Bordetella flabilis |
| 169 | 553111 | 553398 | + | NZ_LR778301.1 | Denitratisoma oestradiolicum |
| 170 | 1640829 | 1641119 | + | NZ_LR134313.1 | Neisseria canis |
| 171 | 4562141 | 4562428 | - | NZ_CP031146.1 | Pseudomonas plecoglossicida |
| 172 | 1674501 | 1674788 | + | NC_008344.1 | Nitrosomonas eutropha C91 |
| 173 | 545637 | 545924 | + | NC_011901.1 | Thioalkalivibrio sulfidiphilus HL-EbGr7 |
| 174 | 359334 | 359642 | - | NZ_CP016440.1 | Bordetella pseudohinzii |
| 175 | 2346675 | 2346965 | - | NZ_CP022278.1 | Neisseria chenwenguii |
| 176 | 2124180 | 2124467 | + | NZ_CP058952.1 | Chitinibacter fontanus |
| 177 | 4919799 | 4920086 | + | NZ_CP068034.2 | Pseudomonas syringae |
| 178 | 4987486 | 4987773 | + | NZ_CP042804.1 | Pseudomonas amygdali pv. tabaci str. ATCC 11528 |
| 179 | 5037595 | 5037882 | + | NC_004578.1 | Pseudomonas syringae pv. tomato str. DC3000 |
| 180 | 2299994 | 2300284 | - | NZ_CP059565.1 | Neisseria wadsworthii |
| 181 | 673885 | 674172 | - | NZ_CP011451.1 | Nitrosomonas communis |
| 182 | 1562937 | 1563224 | + | NZ_CP045302.1 | Azotobacter salinestris |
| 183 | 5962898 | 5963185 | + | NZ_CP048833.1 | Pseudomonas multiresinivorans |
| 184 | 3961820 | 3962107 | + | NZ_CP062158.2 | Pseudomonas lundensis |
| 185 | 148144 | 148431 | - | NC_013959.1 | Sideroxydans lithotrophicus ES-1 |
| 186 | 234821 | 235108 | - | NZ_AP012547.1 | Sulfuritalea hydrogenivorans sk43H |
| 187 | 930702 | 930992 | - | NZ_LR134516.1 | Neisseria animaloris |
| 188 | 1733823 | 1734113 | + | NZ_LT906434.1 | Neisseria zoodegmatis |
| 189 | 4833616 | 4833903 | + | NZ_CP047698.1 | Pseudomonas knackmussii |
| 190 | 214182 | 214490 | + | NC_018518.1 | Bordetella pertussis 18323 |
| 191 | 483804 | 484112 | - | NZ_LR134326.1 | Bordetella bronchiseptica |
| 192 | 3608901 | 3609188 | + | NZ_CP012676.1 | Pseudomonas versuta |
| 193 | 1102645 | 1102932 | - | NZ_CP022562.1 | Pseudomonas monteilii |
| 194 | 4956008 | 4956295 | + | NC_021505.1 | Pseudomonas putida NBRC 14164 |
| 195 | 2311935 | 2312243 | + | NZ_CP022987.1 | Pusillimonas thiosulfatoxidans |
| 196 | 105383 | 105670 | - | NC_022357.1 | Sulfuricella denitrificans skB26 |
| 197 | 5018377 | 5018664 | + | NZ_CP007039.1 | Pseudomonas cichorii JBC1 |
| 198 | 912625 | 912912 | - | NZ_CP013341.1 | Nitrosomonas ureae |
| 199 | 2397347 | 2397634 | + | NZ_CP041730.1 | Chitinimonas arctica |
| 200 | 539560 | 539850 | - | NZ_CP031252.1 | Neisseria elongata |
| 201 | 5028045 | 5028332 | + | NZ_CP049044.1 | Pseudomonas psychrophila |
| 202 | 1563398 | 1563688 | - | NZ_CP059567.1 | Neisseria shayeganii |
| 203 | 60791 | 61081 | - | NZ_LR134533.1 | Neisseria weaveri |
| 204 | 5444971 | 5445258 | + | NZ_CP056030.1 | Pseudomonas eucalypticola |
| 205 | 1238781 | 1239068 | - | NZ_CP014158.1 | Pseudomonas citronellolis |
| 206 | 3813272 | 3813556 | - | NZ_CP053073.1 | Usitatibacter palustris |
| 207 | 810940 | 811227 | - | NZ_CP009533.1 | Pseudomonas rhizosphaerae |
| 208 | 944186 | 944476 | + | NZ_CP072524.1 | Neisseria sicca |
| 209 | 1006584 | 1006871 | - | NZ_CP061079.1 | Pseudomonas chlororaphis |
| 210 | 1043189 | 1043476 | - | NZ_LS999205.1 | Pseudomonas protegens CHA0 |
| 211 | 3918748 | 3919035 | + | NZ_LR215729.2 | Pseudomonas marincola |
| 212 | 4855866 | 4856153 | + | NZ_CP067022.1 | Pseudomonas cannabina pv. alisalensis |
| 213 | 3335250 | 3335537 | - | NZ_CP070505.1 | Pseudomonas toyotomiensis |
| 214 | 1223797 | 1224084 | - | NZ_CP021435.1 | Halomonas beimenensis |
| 215 | 198478 | 198765 | + | NZ_AP014936.1 | Sulfurifustis variabilis |
| 216 | 4232106 | 4232393 | + | NZ_CP060009.1 | Pseudomonas sediminis |
| 217 | 1190373 | 1190660 | - | NZ_CP071706.1 | Pseudomonas donghuensis |
| 218 | 1463001 | 1463294 | - | NZ_LT615228.1 | Polynucleobacter necessarius |
| 219 | 1940364 | 1940657 | - | NZ_CP023276.1 | Polynucleobacter difficilis |
| 220 | 4772487 | 4772774 | + | NZ_CP046621.1 | Pseudomonas alkylphenolica |
| 221 | 5679050 | 5679337 | + | NZ_CP014870.1 | Pseudomonas silesiensis |
| 222 | 4557863 | 4558150 | - | NZ_CP014262.1 | Pseudomonas corrugata |
| 223 | 2105028 | 2105318 | - | NZ_CP046027.1 | Neisseria brasiliensis |
| 224 | 5101619 | 5101906 | + | NZ_CP070503.1 | Pseudomonas atacamensis |
| 225 | 1767273 | 1767563 | + | NZ_CP031700.1 | Neisseria zalophi |
| 226 | 2391288 | 2391575 | + | NZ_AP022843.1 | Halomonas hydrothermalis |
| 227 | 2640666 | 2640953 | + | NZ_CP065135.1 | Halomonas venusta |
| 228 | 976970 | 977257 | - | NZ_CP043311.1 | Pseudomonas lalkuanensis |
| 229 | 1024513 | 1024800 | - | NZ_AP014862.1 | Pseudomonas furukawaii |
| 230 | 1056502 | 1056789 | - | NC_014532.2 | Halomonas elongata DSM 2581 |
| 231 | 2642050 | 2642337 | + | NZ_CP043869.1 | Neptunomonas concharum |
| 232 | 1010750 | 1011037 | - | NZ_CP035088.1 | Pseudomonas viciae |
| 233 | 3128400 | 3128687 | + | NZ_CP048810.1 | Pseudomonas bijieensis |
| 234 | 1054573 | 1054860 | - | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 235 | 1038860 | 1039147 | - | NZ_CP018420.1 | Pseudomonas veronii |
| 236 | 1126361 | 1126648 | - | NC_008027.1 | Pseudomonas entomophila L48 |
| 237 | 6190799 | 6191086 | - | NZ_CP009365.1 | Pseudomonas soli |
| 238 | 1045545 | 1045832 | - | NZ_CP024159.1 | Pseudomonas mosselii |
| 239 | 2865348 | 2865635 | + | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 240 | 3652535 | 3652822 | - | NZ_AP017928.1 | Methylocaldum marinum |
| 241 | 4058098 | 4058385 | + | NZ_CP013124.1 | Pseudomonas mendocina S5.2 |
| 242 | 1176502 | 1176789 | - | NZ_CP054205.1 | Pseudomonas rhodesiae |
| 243 | 1008664 | 1008951 | - | NZ_CP062252.1 | Pseudomonas allokribbensis |
| 244 | 1264711 | 1264998 | - | NZ_AP022642.1 | Pseudomonas otitidis |
| 245 | 3702291 | 3702599 | + | NZ_AP019378.1 | Bordetella parapertussis |
| 246 | 1022881 | 1023168 | - | NZ_CP029608.1 | Pseudomonas kribbensis |
| 247 | 4161930 | 4162217 | + | NZ_CP014205.2 | Pseudomonas glycinae |
| 248 | 1047084 | 1047371 | - | NZ_CP062253.1 | Pseudomonas gozinkensis |
| 249 | 990531 | 990818 | - | NZ_CP068551.1 | Pseudomonas khazarica |
| 250 | 2720851 | 2721138 | + | NZ_CP014226.1 | Halomonas chromatireducens |
| 251 | 1009948 | 1010235 | - | NZ_CP051487.1 | Pseudomonas umsongensis |
| 252 | 3118056 | 3118343 | + | NZ_CP011412.1 | Sedimenticola thiotaurini |
| 253 | 950307 | 950594 | - | NZ_CP027723.1 | Pseudomonas orientalis |
| 254 | 443206 | 443493 | + | NZ_CP018139.1 | Halomonas aestuarii |
| 255 | 3159660 | 3159947 | + | NZ_CP029822.1 | Entomomonas moraniae |
| 256 | 15465 | 15752 | - | NZ_CP010554.1 | Rugosibacter aromaticivorans |
| 257 | 759453 | 759740 | - | NZ_CP012400.2 | Pseudomonas yamanorum |
| 258 | 1103758 | 1104045 | - | NZ_CP027756.1 | Pseudomonas synxantha |
| 259 | 602923 | 603216 | - | NZ_AP022345.1 | Fluviibacter phosphoraccumulans |
| 260 | 4389584 | 4389868 | - | NZ_CP053069.1 | Usitatibacter rugosus |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_008825.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01098.21 | 0.61 | 159 | 4897 | opposite-strand | Cell cycle protein |
| 2 | PF00905.24 | 0.75 | 195 | 2904 | opposite-strand | Penicillin binding protein transpeptidase domain |
| 3 | PF03717.17 | 0.75 | 196 | 2899.0 | opposite-strand | Penicillin-binding Protein dimerisation domain |
| 4 | PF04093.14 | 0.95 | 246 | 2418.5 | opposite-strand | rod shape-determining protein MreD |
| 5 | PF04085.16 | 1.0 | 259 | 1419 | opposite-strand | rod shape-determining protein MreC |
| 6 | PF06723.15 | 0.99 | 257 | 228 | opposite-strand | MreB/Mbl protein |
| 7 | PF14450.8 | 0.78 | 204 | 230.5 | opposite-strand | Cell division protein FtsA |
| 8 | PF01425.23 | 1.0 | 259 | 30 | same-strand | Amidase |
| 9 | PF02934.17 | 0.97 | 252 | 1547.5 | same-strand | GatB/GatE catalytic domain |
| 10 | PF02637.20 | 0.97 | 252 | 1547.5 | same-strand | GatB domain |
++ More..