Result : O33104
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Glutamyl-tRNA(Gln) amidotransferase subunit C (Glu-ADT subunit C) (EC 6.3.5.-) |
| NCBI Accession ID | Z99263.1 |
| Organism | Mycobacterium leprae (strain TN) |
| Left | 13057 |
| Right | 13356 |
| Strand | + |
| Nucleotide Sequence | GTGTCCCCGATCTCCCGCGATGAGGTCTTGCACCTGGCCCGGCTAACCCGACTGGTGTTGACCGATACCGAGTTGGCCAGCTTCTCTAGTCAACTCGACGTCATCCTGGCCCACGTGAGCCAGATTCAGGCTGTTGACGTCACCGGCGTCGAACCTACCGACAATCCGCTCAAATACGTCAACATCACGCGCCCGGACGAGACTGTCCCGTGTCTGACTCAGCAGCAGGCGCTGGCCGAAGCACCCGAAGCCATTTACGGCCGCTTTGTTGTCCCTCAGATCTTGGGGGACAACAAATGA |
| Sequence | MSPISRDEVLHLARLTRLVLTDTELASFSSQLDVILAHVSQIQAVDVTGVEPTDNPLKYVNITRPDETVPCLTQQQALAEAPEAIYGRFVVPQILGDNK |
| Source of smORF | Swiss-Prot |
| Function | Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) (By similarity). {ECO:0000250}. |
| Pubmed ID | 11234002 |
| Domain | CDD:412411 |
| Functional Category | Others |
| Uniprot ID | O33104 |
| ORF Length (Amino Acid) | 99 |
++ More..
| Conservation Analysis |
No. of Species: 163
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2004828 | 2005127 | - | NZ_CP029543.1 | Mycobacterium leprae |
| 2 | 1378594 | 1378836 | + | NZ_CP011883.2 | Mycobacterium haemophilum DSM 44634 |
| 3 | 1933829 | 1934128 | - | NZ_AP022587.1 | Mycobacterium stomatepiae |
| 4 | 3159413 | 3159712 | - | NZ_AP022581.1 | Mycobacterium lacus |
| 5 | 1857591 | 1857890 | - | NZ_AP022576.1 | Mycobacterium florentinum |
| 6 | 2118925 | 2119224 | + | NZ_CP025546.1 | Mycobacterium paragordonae |
| 7 | 918181 | 918480 | - | NZ_AP022568.1 | Mycobacterium simiae |
| 8 | 1611448 | 1611723 | + | NZ_AP018164.1 | Mycobacterium shigaense |
| 9 | 540956 | 541255 | - | NZ_AP022615.1 | Mycobacterium heidelbergense |
| 10 | 3918019 | 3918318 | - | NC_016946.1 | Mycobacterium intracellulare ATCC 13950 |
| 11 | 4035545 | 4035844 | - | NC_016948.1 | Mycobacterium paraintracellulare |
| 12 | 5610030 | 5610329 | + | NZ_AP022573.1 | Mycobacterium saskatchewanense |
| 13 | 3371431 | 3371730 | - | NC_000962.3 | Mycobacterium tuberculosis H37Rv |
| 14 | 3431264 | 3431563 | - | NC_015848.1 | Mycobacterium canettii CIPT 140010059 |
| 15 | 5164116 | 5164415 | + | NC_022663.1 | Mycobacterium kansasii ATCC 12478 |
| 16 | 5252750 | 5252992 | + | NZ_AP022569.1 | Mycobacterium cookii |
| 17 | 730697 | 730996 | + | NZ_AP022575.1 | Mycobacterium shinjukuense |
| 18 | 2609857 | 2610156 | - | NZ_AP022614.1 | Mycobacterium parmense |
| 19 | 3263202 | 3263444 | + | NZ_AP022583.1 | Mycobacterium noviomagense |
| 20 | 2858551 | 2858850 | - | NZ_LT906469.1 | Mycolicibacter terrae |
| 21 | 2558324 | 2558623 | + | NZ_AP022570.1 | Mycolicibacterium poriferae |
| 22 | 2367216 | 2367515 | + | NZ_CP011269.1 | Mycolicibacterium fortuitum |
| 23 | 3765289 | 3765600 | - | NZ_CP023147.1 | Mycobacterium marseillense |
| 24 | 4988188 | 4988487 | - | NZ_AP022606.1 | Mycobacterium branderi |
| 25 | 4657684 | 4657983 | - | NZ_AP022574.1 | Mycolicibacterium psychrotolerans |
| 26 | 5393792 | 5394091 | - | NZ_AP022579.1 | Mycolicibacterium boenickei |
| 27 | 3258454 | 3258753 | + | NZ_CP043474.1 | Mycobacterium grossiae |
| 28 | 5457589 | 5457888 | + | NZ_AP022567.1 | Mycolicibacterium mageritense |
| 29 | 4023633 | 4023932 | + | NZ_AP022600.1 | Mycolicibacterium tokaiense |
| 30 | 4409203 | 4409502 | - | NZ_AP022560.1 | Mycolicibacterium moriokaense |
| 31 | 410917 | 411216 | - | NZ_AP022599.1 | Mycolicibacterium pulveris |
| 32 | 3492648 | 3492947 | - | NZ_AP024310.1 | Mycobacterium heckeshornense |
| 33 | 2176257 | 2176556 | + | NZ_AP022610.1 | Mycolicibacterium madagascariense |
| 34 | 3394716 | 3395015 | + | NZ_AP022588.1 | Mycolicibacterium sediminis |
| 35 | 2030631 | 2030930 | + | NZ_AP022618.1 | Mycolicibacterium insubricum |
| 36 | 3531922 | 3532179 | + | NZ_AP022562.1 | Mycobacterium novum |
| 37 | 2916852 | 2917109 | - | NC_015576.1 | Mycolicibacter sinensis |
| 38 | 1627553 | 1627852 | - | NZ_AP022565.1 | Mycolicibacterium alvei |
| 39 | 3674869 | 3675165 | - | NZ_CP009360.4 | Mycobacterium avium subsp. hominissuis |
| 40 | 4847994 | 4848293 | - | NZ_CP020809.1 | Mycobacterium dioxanotrophicus |
| 41 | 85611 | 85910 | + | NZ_AP022590.1 | Mycobacterium mantenii |
| 42 | 2525273 | 2525572 | - | NZ_AP022563.1 | Mycolicibacterium duvalii |
| 43 | 5353557 | 5353856 | - | NZ_AP022598.1 | Mycolicibacterium parafortuitum |
| 44 | 2065340 | 2065639 | + | NZ_LR134356.1 | Mycolicibacterium aurum |
| 45 | 1483690 | 1483989 | + | NZ_AP022613.1 | Mycobacterium conspicuum |
| 46 | 2255918 | 2256217 | + | NC_008726.1 | Mycolicibacterium vanbaalenii PYR-1 |
| 47 | 4535835 | 4536134 | - | NZ_AP018410.1 | Mycobacterium pseudoshottsii JCM 15466 |
| 48 | 3400068 | 3400367 | + | NZ_CP058277.1 | Mycobacterium marinum |
| 49 | 5380377 | 5380676 | - | NZ_AP022572.1 | Mycobacterium shottsii |
| 50 | 1601818 | 1602117 | - | NZ_AP022616.1 | Mycolicibacterium phocaicum |
| 51 | 5555505 | 5555804 | + | NZ_AP022577.1 | Mycolicibacterium aubagnense |
| 52 | 378010 | 378309 | + | NZ_AP022582.1 | Mycobacterium seoulense |
| 53 | 5741756 | 5742055 | + | NZ_AP022619.1 | Mycobacterium paraseoulense |
| 54 | 1285026 | 1285325 | + | NZ_AP022605.1 | Mycobacterium doricum |
| 55 | 2900223 | 2900522 | - | NZ_AP022617.1 | Mycolicibacterium monacense |
| 56 | 1663642 | 1663941 | - | NZ_AP022603.1 | Mycolicibacterium fallax |
| 57 | 2519689 | 2519988 | - | NZ_AP022586.1 | Mycolicibacterium litorale |
| 58 | 1640871 | 1641170 | + | NZ_LT906483.1 | Mycolicibacterium thermoresistibile |
| 59 | 2170769 | 2171068 | + | NZ_CP062008.1 | Mycolicibacterium mucogenicum DSM 44124 |
| 60 | 1697701 | 1698000 | + | NZ_LR130759.1 | Mycobacterium basiliense |
| 61 | 976826 | 977125 | + | NZ_LR026975.1 | Mycolicibacterium hassiacum DSM 44199 |
| 62 | 5933416 | 5933715 | - | NZ_CP012150.1 | Mycobacterium goodii |
| 63 | 2513983 | 2514282 | + | NZ_LN831039.1 | Mycolicibacterium smegmatis |
| 64 | 1594770 | 1595105 | - | NZ_AP022593.1 | Mycolicibacterium arabiense |
| 65 | 16912 | 17211 | - | NZ_AP022595.1 | Mycolicibacterium sarraceniae |
| 66 | 3251048 | 3251347 | - | NZ_LR134355.1 | Mycolicibacterium chitae |
| 67 | 3223466 | 3223765 | - | NZ_AP022612.1 | Mycolicibacterium confluentis |
| 68 | 569472 | 569771 | + | NZ_AP022601.1 | Mycobacterium gallinarum |
| 69 | 1831210 | 1831509 | - | NZ_AP022608.1 | Mycolicibacterium gadium |
| 70 | 2287779 | 2288078 | - | NZ_AP022609.1 | Mycolicibacter hiberniae |
| 71 | 418068 | 418367 | - | NZ_AP022589.1 | Mycolicibacter minnesotensis |
| 72 | 2082280 | 2082579 | + | NZ_CP011491.1 | Mycolicibacterium vaccae 95051 |
| 73 | 1800371 | 1800670 | + | NZ_AP022561.1 | Mycolicibacterium aichiense |
| 74 | 3152098 | 3152406 | - | NZ_CP024633.1 | Mycobacteroides salmoniphilum |
| 75 | 368236 | 368535 | + | NZ_AP022620.1 | Mycolicibacterium anyangense |
| 76 | 3278730 | 3279038 | - | NZ_AP018165.1 | [Mycobacterium] stephanolepidis |
| 77 | 3346936 | 3347244 | - | NZ_CP007220.1 | Mycobacteroides chelonae CCUG 47445 |
| 78 | 3396975 | 3397283 | - | NZ_CP014955.1 | Mycobacteroides abscessus |
| 79 | 4480082 | 4480381 | + | NZ_AP022596.1 | Mycolicibacterium helvum |
| 80 | 3091988 | 3092296 | - | NZ_CP010271.1 | Mycobacteroides saopaulense |
| 81 | 3582616 | 3582924 | - | NZ_CP011530.1 | Mycobacteroides immunogenum |
| 82 | 5017977 | 5018225 | - | NZ_CP015235.1 | Rhodococcus fascians D188 |
| 83 | 8747016 | 8747315 | + | NZ_CP022088.2 | Nocardia brasiliensis |
| 84 | 4383645 | 4383902 | + | NZ_LS483468.1 | Rhodococcus coprophilus |
| 85 | 3229941 | 3230198 | - | NZ_CP029146.1 | Rhodococcus ruber |
| 86 | 3562445 | 3562744 | - | NZ_CP027793.1 | Rhodococcus hoagii |
| 87 | 5926199 | 5926513 | + | NZ_CP033972.1 | Gordonia insulae |
| 88 | 2570631 | 2570930 | - | NZ_CP048813.1 | Rhodococcus triatomae |
| 89 | 3417058 | 3417315 | - | NZ_LT906450.1 | Rhodococcus rhodochrous |
| 90 | 2166111 | 2166353 | + | NZ_AP017900.1 | Nocardia seriolae |
| 91 | 3758874 | 3759131 | - | NZ_CP022208.1 | Rhodococcus pyridinivorans |
| 92 | 1893625 | 1893948 | + | NC_015312.1 | Pseudonocardia dioxanivorans CB1190 |
| 93 | 1493131 | 1493424 | - | NC_012704.1 | Corynebacterium kroppenstedtii DSM 44385 |
| 94 | 4908776 | 4909033 | - | NZ_CP041695.1 | Nocardia otitidiscaviarum |
| 95 | 3431366 | 3431689 | - | NC_016906.1 | Gordonia polyisoprenivorans VH2 |
| 96 | 4413099 | 4413398 | - | NC_006361.1 | Nocardia farcinica IFM 10152 |
| 97 | 1126535 | 1126834 | + | NZ_CP011545.1 | Corynebacterium testudinoris |
| 98 | 2455296 | 2455595 | + | NZ_AP023172.1 | Rhodococcus qingshengii |
| 99 | 1089787 | 1090029 | - | NZ_CP069485.1 | Corynebacterium glucuronolyticum |
| 100 | 4702219 | 4702518 | + | NZ_CP054938.1 | Streptomyces harbinensis |
| 101 | 4605959 | 4606258 | + | NZ_CP009922.3 | Streptomyces xiamenensis |
| 102 | 3537240 | 3537539 | + | NZ_CP026746.1 | Nocardia cyriacigeorgica |
| 103 | 1226853 | 1227107 | + | NZ_CP011853.1 | Gordonia phthalatica |
| 104 | 974698 | 974997 | + | NZ_CP009248.1 | Corynebacterium sphenisci DSM 44792 |
| 105 | 1230039 | 1230335 | + | NZ_CP009245.1 | Corynebacterium aquilae DSM 44791 |
| 106 | 2997842 | 2998144 | + | NZ_CP053564.1 | Pseudonocardia broussonetiae |
| 107 | 1409990 | 1410289 | + | NC_004369.1 | Corynebacterium efficiens YS-314 |
| 108 | 1076517 | 1076813 | + | NZ_CP007790.1 | Corynebacterium marinum DSM 44953 |
| 109 | 2307021 | 2307317 | - | NZ_CP060404.1 | Streptomyces buecherae |
| 110 | 4976774 | 4977070 | - | NZ_CP018082.1 | Nocardia mangyaensis |
| 111 | 4089481 | 4089780 | - | NC_013510.1 | Thermomonospora curvata DSM 43183 |
| 112 | 5849862 | 5850158 | - | NZ_LR134352.1 | Nocardia asteroides |
| 113 | 10177578 | 10177820 | - | NZ_CP012752.1 | Kibdelosporangium phytohabitans |
| 114 | 2149760 | 2150014 | + | NZ_AP023396.1 | Nocardia wallacei |
| 115 | 1031487 | 1031786 | - | NZ_CP032788.1 | Corynebacterium xerosis |
| 116 | 5663635 | 5663958 | - | NZ_AP018920.1 | Pseudonocardia autotrophica |
| 117 | 5213020 | 5213316 | + | NZ_CP040752.1 | Streptomyces rectiverticillatus |
| 118 | 1644710 | 1645006 | - | NZ_CP009249.1 | Corynebacterium phocae |
| 119 | 825194 | 825490 | + | NZ_CP038213.1 | Ornithinimicrobium flavum |
| 120 | 8407161 | 8407460 | - | NZ_CP007155.1 | Kutzneria albida DSM 43870 |
| 121 | 215480 | 215731 | + | NZ_CP068168.1 | Corynebacterium amycolatum |
| 122 | 391935 | 392237 | - | NZ_CP014635.1 | Corynebacterium simulans |
| 123 | 1793464 | 1793706 | + | NC_022116.1 | Amycolatopsis mediterranei RB |
| 124 | 7993887 | 7994186 | - | NC_019673.1 | Saccharothrix espanaensis DSM 44229 |
| 125 | 1068643 | 1068894 | + | NZ_CP006841.1 | Corynebacterium lactis RW2-5 |
| 126 | 2049494 | 2049790 | - | NZ_CP023202.1 | Streptomyces xinghaiensis S187 |
| 127 | 1376817 | 1377068 | + | NZ_CP011542.1 | Corynebacterium mustelae |
| 128 | 6273809 | 6274105 | + | NZ_CP020569.1 | Streptomyces gilvosporeus |
| 129 | 986332 | 986580 | + | NZ_CP033897.1 | Corynebacterium gerontici |
| 130 | 2643732 | 2644028 | - | NZ_CP023698.1 | Streptomyces viridifaciens |
| 131 | 3287400 | 3287657 | - | NC_015564.1 | Hoyosella subflava DQS3-9A1 |
| 132 | 3474705 | 3475016 | - | NC_013441.1 | Gordonia bronchialis DSM 43247 |
| 133 | 1963074 | 1963370 | - | NZ_CP048882.1 | Streptomyces bathyalis |
| 134 | 1174525 | 1174827 | + | NZ_LT906467.1 | Corynebacterium imitans |
| 135 | 703627 | 703923 | + | NZ_CP044427.1 | Ornithinimicrobium pratense |
| 136 | 849097 | 849354 | + | NZ_CP011312.1 | Corynebacterium kutscheri |
| 137 | 9628468 | 9628767 | - | NZ_CP034550.1 | Saccharothrix syringae |
| 138 | 6948104 | 6948403 | - | NZ_CP023445.1 | Actinosynnema pretiosum |
| 139 | 1091874 | 1092134 | + | NZ_CP011541.1 | Corynebacterium epidermidicanis |
| 140 | 4339808 | 4340104 | - | NZ_CP015163.1 | Amycolatopsis albispora |
| 141 | 994345 | 994620 | + | NZ_CP049257.1 | Nocardioides anomalus |
| 142 | 7087156 | 7087455 | - | NC_013093.1 | Actinosynnema mirum DSM 43827 |
| 143 | 8895713 | 8896012 | - | NC_013595.1 | Streptosporangium roseum DSM 43021 |
| 144 | 7039732 | 7040031 | - | NC_021252.1 | Amycolatopsis keratiniphila |
| 145 | 7516298 | 7516594 | + | NZ_CP065050.1 | Streptomyces solisilvae |
| 146 | 21073 | 21315 | + | NZ_LT906443.1 | Corynebacterium ulcerans |
| 147 | 1273999 | 1274301 | + | NZ_CP010827.1 | Corynebacterium singulare |
| 148 | 1635361 | 1635660 | + | NZ_CP008953.1 | Amycolatopsis japonica |
| 149 | 1020091 | 1020333 | + | NZ_LR738855.1 | Corynebacterium rouxii |
| 150 | 986466 | 986708 | + | NZ_LN831026.1 | Corynebacterium diphtheriae |
| 151 | 4970446 | 4970745 | + | NZ_CP041146.1 | Nocardioides humi |
| 152 | 1591389 | 1591685 | - | NZ_CP067012.1 | Corynebacterium kefirresidentii |
| 153 | 925580 | 925822 | + | NC_017301.2 | Corynebacterium pseudotuberculosis C231 |
| 154 | 2987901 | 2988197 | - | NC_014158.1 | Tsukamurella paurometabola DSM 20162 |
| 155 | 3336719 | 3337015 | - | NZ_CP019066.1 | Tsukamurella tyrosinosolvens |
| 156 | 1072099 | 1072395 | + | NZ_CP011311.1 | Corynebacterium camporealensis |
| 157 | 3716310 | 3716609 | - | NZ_CP022295.1 | Nocardioides aromaticivorans |
| 158 | 1374582 | 1374857 | + | NC_020302.1 | Corynebacterium halotolerans YIM 70093 = DSM 44683 |
| 159 | 1293065 | 1293310 | + | NZ_CP004353.1 | Corynebacterium vitaeruminis DSM 20294 |
| 160 | 1078144 | 1078440 | + | NZ_CP039247.1 | Corynebacterium endometrii |
| 161 | 1872638 | 1872937 | + | NZ_CP016174.1 | Amycolatopsis orientalis |
| 162 | 971073 | 971372 | + | NZ_CP026948.1 | Corynebacterium liangguodongii |
| 163 | 1422996 | 1423292 | - | NZ_CP044548.2 | Janibacter melonis |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP029543.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01425.23 | 1.0 | 163 | -3 | same-strand | Amidase |
| 2 | PF01653.20 | 0.67 | 110 | 1658.5 | same-strand | NAD-dependent DNA ligase adenylation domain |
| 3 | PF03120.18 | 0.68 | 111 | 1657 | same-strand | NAD-dependent DNA ligase OB-fold domain |
| 4 | PF12826.9 | 0.67 | 110 | 1634.0 | same-strand | Helix-hairpin-helix motif |
| 5 | PF00533.28 | 0.68 | 111 | 1657 | same-strand | BRCA1 C Terminus (BRCT) domain |
| 6 | PF03119.18 | 0.68 | 111 | 1657 | same-strand | NAD-dependent DNA ligase C4 zinc finger domain |
++ More..